Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02296 and ECD_02297 are separated by 21 nucleotides ECD_02297 and ECD_02298 are separated by 218 nucleotides
ECD_02296: ECD_02296 - putative enzyme IIC component of PTS, at 2,384,533 to 2,385,780
_02296
ECD_02297: ECD_02297 - putative enzyme IIB component of PTS, at 2,385,802 to 2,386,128
_02297
ECD_02298: ECD_02298 - glucokinase, at 2,386,347 to 2,387,312
_02298
Position (kb)
2385
2386
2387 Strain fitness (log2 ratio)
-1
0
1
2 at 2384.925 kb on + strand, within ECD_02296 at 2384.959 kb on + strand, within ECD_02296 at 2385.057 kb on - strand, within ECD_02296 at 2385.096 kb on + strand, within ECD_02296 at 2385.097 kb on - strand, within ECD_02296 at 2385.141 kb on - strand, within ECD_02296 at 2385.141 kb on - strand, within ECD_02296 at 2385.143 kb on + strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.273 kb on + strand, within ECD_02296 at 2385.274 kb on - strand, within ECD_02296 at 2385.327 kb on + strand, within ECD_02296 at 2385.505 kb on + strand, within ECD_02296 at 2385.540 kb on + strand, within ECD_02296 at 2385.541 kb on - strand, within ECD_02296 at 2385.586 kb on - strand, within ECD_02296 at 2385.586 kb on - strand, within ECD_02296 at 2385.632 kb on - strand, within ECD_02296 at 2385.804 kb on - strand at 2385.928 kb on - strand, within ECD_02297 at 2386.071 kb on + strand, within ECD_02297 at 2386.106 kb on - strand at 2386.106 kb on - strand at 2386.106 kb on - strand at 2386.204 kb on + strand at 2386.204 kb on + strand at 2386.204 kb on + strand at 2386.464 kb on - strand, within ECD_02298 at 2386.593 kb on - strand, within ECD_02298 at 2386.662 kb on - strand, within ECD_02298 at 2386.717 kb on + strand, within ECD_02298 at 2386.932 kb on - strand, within ECD_02298
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,384,925 + ECD_02296 0.31 +0.2 2,384,959 + ECD_02296 0.34 +0.8 2,385,057 - ECD_02296 0.42 +1.0 2,385,096 + ECD_02296 0.45 -0.9 2,385,097 - ECD_02296 0.45 -0.1 2,385,141 - ECD_02296 0.49 +1.0 2,385,141 - ECD_02296 0.49 +0.2 2,385,143 + ECD_02296 0.49 -0.1 2,385,144 - ECD_02296 0.49 +1.2 2,385,144 - ECD_02296 0.49 +1.0 2,385,144 - ECD_02296 0.49 +0.2 2,385,144 - ECD_02296 0.49 +1.1 2,385,273 + ECD_02296 0.59 -0.2 2,385,274 - ECD_02296 0.59 -0.4 2,385,327 + ECD_02296 0.64 +1.8 2,385,505 + ECD_02296 0.78 -0.6 2,385,540 + ECD_02296 0.81 +0.2 2,385,541 - ECD_02296 0.81 -0.1 2,385,586 - ECD_02296 0.84 +0.1 2,385,586 - ECD_02296 0.84 +0.1 2,385,632 - ECD_02296 0.88 -0.1 2,385,804 - -1.0 2,385,928 - ECD_02297 0.39 -0.2 2,386,071 + ECD_02297 0.82 +1.7 2,386,106 - -0.2 2,386,106 - +0.5 2,386,106 - -0.6 2,386,204 + -0.4 2,386,204 + +0.4 2,386,204 + -1.4 2,386,464 - ECD_02298 0.12 -0.9 2,386,593 - ECD_02298 0.25 -0.3 2,386,662 - ECD_02298 0.33 -1.1 2,386,717 + ECD_02298 0.38 -0.5 2,386,932 - ECD_02298 0.61 -1.4
Or see this region's nucleotide sequence