Strain Fitness in Escherichia coli BL21 around ECD_02284

Experiment: N4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02283 and ECD_02284 are separated by 53 nucleotidesECD_02284 and ECD_02285 are separated by 512 nucleotides ECD_02283: ECD_02283 - oxalyl CoA decarboxylase, ThDP-dependent, at 2,368,144 to 2,369,838 _02283 ECD_02284: ECD_02284 - formyl-CoA transferase, NAD(P)-binding, at 2,369,892 to 2,371,142 _02284 ECD_02285: ECD_02285 - uncharacterized protein, at 2,371,655 to 2,372,287 _02285 Position (kb) 2369 2370 2371 2372Strain fitness (log2 ratio) -1 0 1at 2368.954 kb on - strand, within ECD_02283at 2368.975 kb on - strand, within ECD_02283at 2369.076 kb on + strand, within ECD_02283at 2369.487 kb on - strand, within ECD_02283at 2369.760 kb on - strandat 2370.507 kb on + strand, within ECD_02284at 2370.735 kb on + strand, within ECD_02284at 2370.736 kb on - strand, within ECD_02284at 2371.731 kb on + strand, within ECD_02285

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Per-strain Table

Position Strand Gene LocusTag Fraction N4
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2,368,954 - ECD_02283 0.48 +0.4
2,368,975 - ECD_02283 0.49 +0.8
2,369,076 + ECD_02283 0.55 +0.5
2,369,487 - ECD_02283 0.79 -0.4
2,369,760 - -0.5
2,370,507 + ECD_02284 0.49 +0.4
2,370,735 + ECD_02284 0.67 -0.6
2,370,736 - ECD_02284 0.67 -1.3
2,371,731 + ECD_02285 0.12 -0.4

Or see this region's nucleotide sequence