Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02096 and ECD_02097 are separated by 16 nucleotides ECD_02097 and ECD_02098 overlap by 1 nucleotides
ECD_02096: ECD_02096 - fused fructose-specific PTS enzymes: IIBcomponent/IIC components, at 2,154,568 to 2,156,259
_02096
ECD_02097: ECD_02097 - fructose-1-phosphate kinase, at 2,156,276 to 2,157,214
_02097
ECD_02098: ECD_02098 - fused fructose-specific PTS enzymes: IIA component/HPr component, at 2,157,214 to 2,158,344
_02098
Position (kb)
2156
2157
2158 Strain fitness (log2 ratio)
-2
-1
0
1 at 2155.300 kb on - strand, within ECD_02096 at 2155.398 kb on - strand, within ECD_02096 at 2155.554 kb on - strand, within ECD_02096 at 2155.554 kb on - strand, within ECD_02096 at 2155.554 kb on - strand, within ECD_02096 at 2155.554 kb on - strand, within ECD_02096 at 2155.554 kb on - strand, within ECD_02096 at 2155.718 kb on + strand, within ECD_02096 at 2155.719 kb on - strand, within ECD_02096 at 2155.719 kb on - strand, within ECD_02096 at 2155.792 kb on + strand, within ECD_02096 at 2156.209 kb on - strand at 2156.210 kb on + strand at 2156.210 kb on + strand at 2156.211 kb on - strand at 2156.211 kb on - strand at 2156.292 kb on - strand at 2156.292 kb on - strand at 2156.336 kb on - strand at 2156.339 kb on - strand at 2156.358 kb on - strand at 2156.447 kb on - strand, within ECD_02097 at 2156.472 kb on - strand, within ECD_02097 at 2156.552 kb on - strand, within ECD_02097 at 2156.552 kb on - strand, within ECD_02097 at 2156.958 kb on - strand, within ECD_02097 at 2157.069 kb on - strand, within ECD_02097 at 2157.194 kb on - strand at 2157.197 kb on - strand at 2157.319 kb on - strand at 2157.349 kb on - strand, within ECD_02098 at 2157.349 kb on - strand, within ECD_02098 at 2157.405 kb on + strand, within ECD_02098 at 2157.571 kb on - strand, within ECD_02098 at 2157.745 kb on - strand, within ECD_02098 at 2158.065 kb on - strand, within ECD_02098 at 2158.168 kb on - strand, within ECD_02098
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,155,300 - ECD_02096 0.43 -0.6 2,155,398 - ECD_02096 0.49 -1.2 2,155,554 - ECD_02096 0.58 +0.1 2,155,554 - ECD_02096 0.58 -1.0 2,155,554 - ECD_02096 0.58 -0.8 2,155,554 - ECD_02096 0.58 -0.4 2,155,554 - ECD_02096 0.58 +0.9 2,155,718 + ECD_02096 0.68 -0.2 2,155,719 - ECD_02096 0.68 -0.3 2,155,719 - ECD_02096 0.68 -0.1 2,155,792 + ECD_02096 0.72 +0.6 2,156,209 - +0.1 2,156,210 + +0.6 2,156,210 + -1.0 2,156,211 - +1.0 2,156,211 - -0.1 2,156,292 - -0.4 2,156,292 - +1.4 2,156,336 - -1.5 2,156,339 - -0.3 2,156,358 - +0.1 2,156,447 - ECD_02097 0.18 -0.2 2,156,472 - ECD_02097 0.21 -1.0 2,156,552 - ECD_02097 0.29 -0.6 2,156,552 - ECD_02097 0.29 -2.0 2,156,958 - ECD_02097 0.73 +0.1 2,157,069 - ECD_02097 0.84 -0.4 2,157,194 - -0.6 2,157,197 - +1.0 2,157,319 - +1.2 2,157,349 - ECD_02098 0.12 +0.4 2,157,349 - ECD_02098 0.12 +0.1 2,157,405 + ECD_02098 0.17 -0.4 2,157,571 - ECD_02098 0.32 +0.2 2,157,745 - ECD_02098 0.47 -0.2 2,158,065 - ECD_02098 0.75 +0.1 2,158,168 - ECD_02098 0.84 -0.3
Or see this region's nucleotide sequence