Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02080 and ECD_02081 are separated by 141 nucleotides ECD_02081 and ECD_02082 are separated by 16 nucleotides ECD_02082 and ECD_02083 are separated by 257 nucleotides
ECD_02080: ECD_02080 - galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor, at 2,135,527 to 2,136,567
_02080
ECD_02081: ECD_02081 - DUF418 family putative inner membrane protein, at 2,136,709 to 2,137,866
_02081
ECD_02082: ECD_02082 - GTP cyclohydrolase I, at 2,137,883 to 2,138,551
_02082
ECD_02083: ECD_02083 - S-formylglutathione hydrolase, at 2,138,809 to 2,139,645
_02083
Position (kb)
2136
2137
2138 Strain fitness (log2 ratio)
-2
-1
0
1 at 2135.773 kb on + strand, within ECD_02080 at 2135.845 kb on + strand, within ECD_02080 at 2136.034 kb on - strand, within ECD_02080 at 2136.275 kb on + strand, within ECD_02080 at 2136.276 kb on - strand, within ECD_02080 at 2136.276 kb on - strand, within ECD_02080 at 2136.297 kb on - strand, within ECD_02080 at 2136.568 kb on - strand at 2136.568 kb on - strand at 2136.634 kb on + strand at 2136.723 kb on + strand at 2136.807 kb on + strand at 2136.808 kb on - strand at 2136.932 kb on + strand, within ECD_02081 at 2137.072 kb on + strand, within ECD_02081 at 2137.072 kb on + strand, within ECD_02081 at 2137.073 kb on - strand, within ECD_02081 at 2137.187 kb on - strand, within ECD_02081 at 2137.265 kb on + strand, within ECD_02081 at 2137.266 kb on - strand, within ECD_02081 at 2137.568 kb on - strand, within ECD_02081 at 2137.808 kb on - strand at 2138.607 kb on - strand at 2138.617 kb on - strand at 2138.628 kb on - strand at 2138.729 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,135,773 + ECD_02080 0.24 -0.5 2,135,845 + ECD_02080 0.31 +0.4 2,136,034 - ECD_02080 0.49 +0.7 2,136,275 + ECD_02080 0.72 +0.0 2,136,276 - ECD_02080 0.72 +1.1 2,136,276 - ECD_02080 0.72 +0.2 2,136,297 - ECD_02080 0.74 -2.0 2,136,568 - -0.1 2,136,568 - +0.8 2,136,634 + -0.2 2,136,723 + +0.2 2,136,807 + +1.1 2,136,808 - -0.2 2,136,932 + ECD_02081 0.19 +1.7 2,137,072 + ECD_02081 0.31 +1.1 2,137,072 + ECD_02081 0.31 +1.0 2,137,073 - ECD_02081 0.31 +0.4 2,137,187 - ECD_02081 0.41 -0.8 2,137,265 + ECD_02081 0.48 +0.4 2,137,266 - ECD_02081 0.48 +0.6 2,137,568 - ECD_02081 0.74 +0.2 2,137,808 - +0.2 2,138,607 - -0.8 2,138,617 - +0.7 2,138,628 - -0.7 2,138,729 - -0.0
Or see this region's nucleotide sequence