Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01854 and ECD_01855 are separated by 2 nucleotides ECD_01855 and ECD_01856 are separated by 18 nucleotides ECD_01856 and ECD_01857 are separated by 45 nucleotides
ECD_01854: ECD_01854 - fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA, at 1,913,370 to 1,914,419
_01854
ECD_01855: ECD_01855 - chemotaxis regulator, protein-glutamate methyltransferase, at 1,914,422 to 1,915,282
_01855
ECD_01856: ECD_01856 - methyl-accepting protein IV, at 1,915,301 to 1,916,902
_01856
ECD_01857: ECD_01857 - methyl-accepting chemotaxis protein II, at 1,916,948 to 1,918,609
_01857
Position (kb) 1915
1916
1917 Strain fitness (log2 ratio) -1
0
1
2 at 1914.891 kb on + strand, within ECD_01855 at 1915.194 kb on - strand, within ECD_01855 at 1915.248 kb on - strand at 1915.548 kb on - strand, within ECD_01856 at 1915.550 kb on - strand, within ECD_01856 at 1916.115 kb on - strand, within ECD_01856 at 1916.185 kb on - strand, within ECD_01856 at 1916.185 kb on - strand, within ECD_01856 at 1916.187 kb on - strand, within ECD_01856 at 1916.298 kb on + strand, within ECD_01856 at 1916.354 kb on - strand, within ECD_01856 at 1916.671 kb on - strand, within ECD_01856 at 1916.674 kb on + strand, within ECD_01856 at 1916.674 kb on + strand, within ECD_01856 at 1916.675 kb on - strand, within ECD_01856 at 1916.675 kb on - strand, within ECD_01856 at 1916.675 kb on - strand, within ECD_01856 at 1917.784 kb on - strand, within ECD_01857
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 1,914,891 + ECD_01855 0.54 -0.3 1,915,194 - ECD_01855 0.90 +0.3 1,915,248 - -0.4 1,915,548 - ECD_01856 0.15 -0.1 1,915,550 - ECD_01856 0.16 -0.3 1,916,115 - ECD_01856 0.51 +2.1 1,916,185 - ECD_01856 0.55 +0.1 1,916,185 - ECD_01856 0.55 +0.4 1,916,187 - ECD_01856 0.55 -0.9 1,916,298 + ECD_01856 0.62 +1.1 1,916,354 - ECD_01856 0.66 -0.6 1,916,671 - ECD_01856 0.86 +0.8 1,916,674 + ECD_01856 0.86 -0.1 1,916,674 + ECD_01856 0.86 -0.9 1,916,675 - ECD_01856 0.86 +0.4 1,916,675 - ECD_01856 0.86 +0.9 1,916,675 - ECD_01856 0.86 +0.6 1,917,784 - ECD_01857 0.50 -1.5
Or see this region's nucleotide sequence