Strain Fitness in Escherichia coli BL21 around ECD_01758

Experiment: N4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01755 and ECD_01756 are separated by 42 nucleotidesECD_01756 and ECD_01757 are separated by 0 nucleotidesECD_01757 and ECD_01758 are separated by 169 nucleotidesECD_01758 and ECD_01759 overlap by 44 nucleotidesECD_01759 and ECD_01760 are separated by 96 nucleotides ECD_01755: ECD_01755 - putative diguanylate cyclase, at 1,816,418 to 1,817,908 _01755 ECD_01756: ECD_01756 - aminoacyl-tRNA editing domain protein, at 1,817,951 to 1,818,454 _01756 ECD_01757: ECD_01757 - uncharacterized protein, at 1,818,455 to 1,818,559 _01757 ECD_01758: ECD_01758 - UPF0756 family putative inner membrane protein, at 1,818,729 to 1,819,175 _01758 ECD_01759: ECD_01759 - putative DNA-binding transcriptional regulator, at 1,819,132 to 1,819,953 _01759 ECD_01760: ECD_01760 - putative MFS transporter, inner membrane protein, at 1,820,050 to 1,821,231 _01760 Position (kb) 1818 1819 1820Strain fitness (log2 ratio) -2 -1 0 1at 1818.456 kb on + strandat 1818.456 kb on + strandat 1818.457 kb on - strandat 1819.190 kb on + strandat 1819.325 kb on - strand, within ECD_01759at 1819.885 kb on - strandat 1820.004 kb on + strandat 1820.049 kb on + strandat 1820.050 kb on - strandat 1820.050 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction N4
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1,818,456 + +1.2
1,818,456 + -0.1
1,818,457 - +0.5
1,819,190 + +1.1
1,819,325 - ECD_01759 0.23 +0.2
1,819,885 - -1.8
1,820,004 + +1.2
1,820,049 + -2.1
1,820,050 - -0.2
1,820,050 - -0.2

Or see this region's nucleotide sequence