Strain Fitness in Escherichia coli BL21 around ECD_01705

Experiment: N4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01703 and ECD_01704 are separated by 104 nucleotidesECD_01704 and ECD_01705 are separated by 7 nucleotidesECD_01705 and ECD_01706 are separated by 50 nucleotides ECD_01703: ECD_01703 - phospho-chitobiase; general 6-phospho-beta-glucosidase activity, at 1,761,561 to 1,762,913 _01703 ECD_01704: ECD_01704 - repressor of chb operon for N,N'-diacetylchitobiose utilization, at 1,763,018 to 1,763,860 _01704 ECD_01705: ECD_01705 - N,N'-diacetylchitobiose-specific enzyme IIA component of PTS, at 1,763,868 to 1,764,218 _01705 ECD_01706: ECD_01706 - N,N'-diacetylchitobiose-specific enzyme IIC component of PTS, at 1,764,269 to 1,765,627 _01706 Position (kb) 1763 1764 1765Strain fitness (log2 ratio) -1 0 1at 1764.219 kb on - strandat 1764.293 kb on - strandat 1764.499 kb on - strand, within ECD_01706at 1764.574 kb on + strand, within ECD_01706

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Per-strain Table

Position Strand Gene LocusTag Fraction N4
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1,764,219 - +0.3
1,764,293 - +1.1
1,764,499 - ECD_01706 0.17 -0.1
1,764,574 + ECD_01706 0.22 -1.6

Or see this region's nucleotide sequence