Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00843 and ECD_00844 overlap by 8 nucleotides ECD_00844 and ECD_00845 overlap by 4 nucleotides ECD_00845 and ECD_00846 are separated by 1 nucleotides ECD_00846 and ECD_00847 overlap by 29 nucleotides
ECD_00843: ECD_00843 - phage baseplate assembly protein, at 886,945 to 887,853
_00843
ECD_00844: ECD_00844 - putative phage tail protein, at 887,846 to 888,451
_00844
ECD_00845: ECD_00845 - hypothetical protein, at 888,448 to 890,070
_00845
ECD_00846: ECD_00846 - hypothetical protein, at 890,072 to 890,509
_00846
ECD_00847: ECD_00847 - e14 prophage; putative tail fiber assembly protein, at 890,481 to 891,083
_00847
Position (kb) 888
889
890
891 Strain fitness (log2 ratio) -1
0
1 at 887.814 kb on + strand at 888.065 kb on + strand, within ECD_00844 at 888.220 kb on + strand, within ECD_00844 at 888.220 kb on + strand, within ECD_00844 at 888.225 kb on - strand, within ECD_00844 at 888.225 kb on - strand, within ECD_00844 at 888.336 kb on - strand, within ECD_00844 at 888.336 kb on - strand, within ECD_00844 at 888.359 kb on + strand, within ECD_00844 at 888.365 kb on + strand, within ECD_00844 at 888.637 kb on + strand, within ECD_00845 at 888.775 kb on + strand, within ECD_00845 at 888.777 kb on + strand, within ECD_00845 at 888.852 kb on + strand, within ECD_00845 at 888.898 kb on + strand, within ECD_00845 at 888.898 kb on + strand, within ECD_00845 at 888.898 kb on + strand, within ECD_00845 at 888.942 kb on + strand, within ECD_00845 at 888.985 kb on + strand, within ECD_00845 at 888.985 kb on + strand, within ECD_00845 at 888.985 kb on + strand, within ECD_00845 at 889.105 kb on - strand, within ECD_00845 at 889.455 kb on + strand, within ECD_00845 at 889.514 kb on + strand, within ECD_00845 at 889.514 kb on + strand, within ECD_00845 at 889.515 kb on - strand, within ECD_00845 at 889.515 kb on - strand, within ECD_00845 at 889.551 kb on + strand, within ECD_00845 at 889.570 kb on + strand, within ECD_00845 at 889.570 kb on + strand, within ECD_00845 at 889.593 kb on + strand, within ECD_00845 at 889.593 kb on + strand, within ECD_00845 at 889.598 kb on + strand, within ECD_00845 at 889.687 kb on + strand, within ECD_00845 at 889.860 kb on + strand, within ECD_00845 at 889.894 kb on + strand, within ECD_00845 at 889.894 kb on + strand, within ECD_00845 at 889.935 kb on - strand at 889.971 kb on + strand at 889.971 kb on + strand at 889.972 kb on - strand at 890.081 kb on + strand at 890.225 kb on - strand, within ECD_00846 at 890.225 kb on - strand, within ECD_00846 at 890.319 kb on + strand, within ECD_00846 at 890.320 kb on - strand, within ECD_00846 at 890.339 kb on + strand, within ECD_00846 at 890.471 kb on - strand at 890.554 kb on + strand, within ECD_00847 at 890.571 kb on - strand, within ECD_00847 at 890.633 kb on + strand, within ECD_00847 at 890.715 kb on - strand, within ECD_00847 at 890.715 kb on - strand, within ECD_00847 at 890.715 kb on - strand, within ECD_00847 at 890.835 kb on - strand, within ECD_00847 at 891.021 kb on - strand, within ECD_00847
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 887,814 + +1.5 888,065 + ECD_00844 0.36 +1.4 888,220 + ECD_00844 0.62 +0.0 888,220 + ECD_00844 0.62 -0.5 888,225 - ECD_00844 0.63 -0.1 888,225 - ECD_00844 0.63 +0.4 888,336 - ECD_00844 0.81 +0.5 888,336 - ECD_00844 0.81 +0.2 888,359 + ECD_00844 0.85 -1.7 888,365 + ECD_00844 0.86 +0.5 888,637 + ECD_00845 0.12 -0.2 888,775 + ECD_00845 0.20 -0.6 888,777 + ECD_00845 0.20 +1.6 888,852 + ECD_00845 0.25 +0.7 888,898 + ECD_00845 0.28 -1.7 888,898 + ECD_00845 0.28 -1.4 888,898 + ECD_00845 0.28 +0.0 888,942 + ECD_00845 0.30 -0.1 888,985 + ECD_00845 0.33 +1.1 888,985 + ECD_00845 0.33 +0.5 888,985 + ECD_00845 0.33 -0.4 889,105 - ECD_00845 0.40 +0.4 889,455 + ECD_00845 0.62 +1.0 889,514 + ECD_00845 0.66 -0.3 889,514 + ECD_00845 0.66 -0.7 889,515 - ECD_00845 0.66 +0.4 889,515 - ECD_00845 0.66 +1.1 889,551 + ECD_00845 0.68 -1.5 889,570 + ECD_00845 0.69 -0.2 889,570 + ECD_00845 0.69 -0.9 889,593 + ECD_00845 0.71 -0.7 889,593 + ECD_00845 0.71 +1.5 889,598 + ECD_00845 0.71 +0.6 889,687 + ECD_00845 0.76 +0.4 889,860 + ECD_00845 0.87 +0.8 889,894 + ECD_00845 0.89 +0.6 889,894 + ECD_00845 0.89 +0.8 889,935 - -0.5 889,971 + +0.2 889,971 + +0.7 889,972 - -0.6 890,081 + +0.2 890,225 - ECD_00846 0.35 +0.7 890,225 - ECD_00846 0.35 -1.3 890,319 + ECD_00846 0.56 +0.3 890,320 - ECD_00846 0.57 -0.3 890,339 + ECD_00846 0.61 +0.5 890,471 - +0.2 890,554 + ECD_00847 0.12 +1.7 890,571 - ECD_00847 0.15 +0.8 890,633 + ECD_00847 0.25 -1.4 890,715 - ECD_00847 0.39 +0.1 890,715 - ECD_00847 0.39 -0.2 890,715 - ECD_00847 0.39 +0.4 890,835 - ECD_00847 0.59 +0.3 891,021 - ECD_00847 0.90 -0.6
Or see this region's nucleotide sequence