Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00595 and ECD_00596 are separated by 128 nucleotides ECD_00596 and ECD_00597 are separated by 100 nucleotides
ECD_00595: ECD_00595 - putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family), at 618,392 to 619,180
_00595
ECD_00596: ECD_00596 - TatABCE protein translocation system subunit, at 619,309 to 619,512
_00596
ECD_00597: ECD_00597 - lipoate synthase, at 619,613 to 620,578
_00597
Position (kb) 619
620 Strain fitness (log2 ratio) -2
-1
0
1 at 618.339 kb on + strand at 618.350 kb on - strand at 618.490 kb on - strand, within ECD_00595 at 618.613 kb on + strand, within ECD_00595 at 618.614 kb on - strand, within ECD_00595 at 618.673 kb on + strand, within ECD_00595 at 618.732 kb on - strand, within ECD_00595 at 618.840 kb on + strand, within ECD_00595 at 618.841 kb on - strand, within ECD_00595 at 618.894 kb on + strand, within ECD_00595 at 618.980 kb on + strand, within ECD_00595 at 618.980 kb on + strand, within ECD_00595 at 618.980 kb on + strand, within ECD_00595 at 618.980 kb on + strand, within ECD_00595 at 618.981 kb on - strand, within ECD_00595 at 618.981 kb on - strand, within ECD_00595 at 618.982 kb on + strand, within ECD_00595 at 618.982 kb on + strand, within ECD_00595 at 618.982 kb on + strand, within ECD_00595 at 619.035 kb on + strand, within ECD_00595 at 619.035 kb on + strand, within ECD_00595 at 619.174 kb on - strand at 619.174 kb on - strand at 619.176 kb on + strand at 619.177 kb on - strand at 619.290 kb on - strand at 619.290 kb on - strand at 619.308 kb on + strand at 619.308 kb on + strand at 619.340 kb on + strand, within ECD_00596 at 619.504 kb on - strand at 619.539 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 618,339 + -0.5 618,350 - -0.1 618,490 - ECD_00595 0.12 +0.9 618,613 + ECD_00595 0.28 -0.9 618,614 - ECD_00595 0.28 -0.1 618,673 + ECD_00595 0.36 -0.3 618,732 - ECD_00595 0.43 -2.2 618,840 + ECD_00595 0.57 -0.0 618,841 - ECD_00595 0.57 -0.1 618,894 + ECD_00595 0.64 +1.3 618,980 + ECD_00595 0.75 -0.6 618,980 + ECD_00595 0.75 -0.9 618,980 + ECD_00595 0.75 +0.4 618,980 + ECD_00595 0.75 -0.2 618,981 - ECD_00595 0.75 -0.3 618,981 - ECD_00595 0.75 -0.1 618,982 + ECD_00595 0.75 +0.2 618,982 + ECD_00595 0.75 -0.8 618,982 + ECD_00595 0.75 +0.7 619,035 + ECD_00595 0.81 +1.1 619,035 + ECD_00595 0.81 -0.4 619,174 - -0.3 619,174 - +0.3 619,176 + +0.7 619,177 - +0.8 619,290 - +0.5 619,290 - -0.0 619,308 + +0.8 619,308 + +0.3 619,340 + ECD_00596 0.15 +0.8 619,504 - +0.5 619,539 - +0.6
Or see this region's nucleotide sequence