Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00561 and ECD_00562 are separated by 13 nucleotides ECD_00562 and ECD_00563 overlap by 1 nucleotides ECD_00563 and ECD_00564 are separated by 2 nucleotides
ECD_00561: ECD_00561 - 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex, at 586,557 to 588,167
_00561
ECD_00562: ECD_00562 - isochorismatase, at 588,181 to 589,038
_00562
ECD_00563: ECD_00563 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 589,038 to 589,784
_00563
ECD_00564: ECD_00564 - enterobactin synthesis proofreading thioesterase, at 589,787 to 590,200
_00564
Position (kb) 588
589
590 Strain fitness (log2 ratio) -2
-1
0
1
2 at 587.181 kb on + strand, within ECD_00561 at 587.182 kb on - strand, within ECD_00561 at 587.182 kb on - strand, within ECD_00561 at 587.195 kb on + strand, within ECD_00561 at 587.259 kb on - strand, within ECD_00561 at 587.262 kb on + strand, within ECD_00561 at 587.262 kb on + strand, within ECD_00561 at 587.263 kb on - strand, within ECD_00561 at 587.263 kb on - strand, within ECD_00561 at 587.263 kb on - strand, within ECD_00561 at 587.471 kb on - strand, within ECD_00561 at 587.650 kb on + strand, within ECD_00561 at 587.651 kb on - strand, within ECD_00561 at 587.739 kb on + strand, within ECD_00561 at 587.826 kb on + strand, within ECD_00561 at 587.931 kb on + strand, within ECD_00561 at 587.932 kb on - strand, within ECD_00561 at 587.932 kb on - strand, within ECD_00561 at 587.996 kb on - strand, within ECD_00561 at 588.133 kb on + strand at 588.133 kb on + strand at 588.205 kb on + strand at 588.281 kb on + strand, within ECD_00562 at 588.282 kb on - strand, within ECD_00562 at 588.376 kb on + strand, within ECD_00562 at 588.393 kb on + strand, within ECD_00562 at 588.406 kb on + strand, within ECD_00562 at 588.459 kb on + strand, within ECD_00562 at 588.459 kb on + strand, within ECD_00562 at 588.459 kb on + strand, within ECD_00562 at 588.459 kb on + strand, within ECD_00562 at 588.622 kb on - strand, within ECD_00562 at 588.632 kb on + strand, within ECD_00562 at 588.651 kb on + strand, within ECD_00562 at 588.684 kb on + strand, within ECD_00562 at 588.688 kb on - strand, within ECD_00562 at 588.696 kb on + strand, within ECD_00562 at 588.810 kb on + strand, within ECD_00562 at 589.016 kb on + strand at 589.092 kb on + strand at 589.186 kb on + strand, within ECD_00563 at 589.186 kb on + strand, within ECD_00563 at 589.222 kb on + strand, within ECD_00563 at 589.223 kb on - strand, within ECD_00563 at 589.457 kb on + strand, within ECD_00563 at 589.458 kb on - strand, within ECD_00563 at 589.544 kb on + strand, within ECD_00563 at 589.545 kb on - strand, within ECD_00563 at 589.577 kb on + strand, within ECD_00563 at 589.782 kb on + strand at 589.783 kb on - strand at 589.999 kb on + strand, within ECD_00564
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 587,181 + ECD_00561 0.39 -0.6 587,182 - ECD_00561 0.39 -0.2 587,182 - ECD_00561 0.39 +0.4 587,195 + ECD_00561 0.40 -0.7 587,259 - ECD_00561 0.44 +2.2 587,262 + ECD_00561 0.44 +0.3 587,262 + ECD_00561 0.44 +0.2 587,263 - ECD_00561 0.44 -0.7 587,263 - ECD_00561 0.44 +0.3 587,263 - ECD_00561 0.44 +0.2 587,471 - ECD_00561 0.57 +0.6 587,650 + ECD_00561 0.68 -0.2 587,651 - ECD_00561 0.68 -0.4 587,739 + ECD_00561 0.73 +1.0 587,826 + ECD_00561 0.79 +0.7 587,931 + ECD_00561 0.85 +0.5 587,932 - ECD_00561 0.85 +0.7 587,932 - ECD_00561 0.85 -0.9 587,996 - ECD_00561 0.89 +0.6 588,133 + -0.1 588,133 + +0.5 588,205 + -0.1 588,281 + ECD_00562 0.12 +0.7 588,282 - ECD_00562 0.12 +0.3 588,376 + ECD_00562 0.23 -0.5 588,393 + ECD_00562 0.25 -0.0 588,406 + ECD_00562 0.26 +0.7 588,459 + ECD_00562 0.32 +0.0 588,459 + ECD_00562 0.32 -0.3 588,459 + ECD_00562 0.32 +1.0 588,459 + ECD_00562 0.32 -1.0 588,622 - ECD_00562 0.51 -0.1 588,632 + ECD_00562 0.53 +0.1 588,651 + ECD_00562 0.55 -0.3 588,684 + ECD_00562 0.59 -0.6 588,688 - ECD_00562 0.59 -2.0 588,696 + ECD_00562 0.60 +0.1 588,810 + ECD_00562 0.73 +1.5 589,016 + -0.3 589,092 + -1.1 589,186 + ECD_00563 0.20 -0.4 589,186 + ECD_00563 0.20 -0.4 589,222 + ECD_00563 0.25 -0.4 589,223 - ECD_00563 0.25 -0.1 589,457 + ECD_00563 0.56 +0.1 589,458 - ECD_00563 0.56 -1.4 589,544 + ECD_00563 0.68 +0.1 589,545 - ECD_00563 0.68 +1.3 589,577 + ECD_00563 0.72 -0.1 589,782 + +0.7 589,783 - -0.1 589,999 + ECD_00564 0.51 +0.1
Or see this region's nucleotide sequence