Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00204 and ECD_00205 are separated by 71 nucleotides ECD_00205 and ECD_00206 are separated by 33 nucleotides ECD_00206 and ECD_00207 overlap by 4 nucleotides ECD_00207 and ECD_00208 are separated by 64 nucleotides
ECD_00204: ECD_00204 - putative membrane-bound lytic murein transglycosylase D, at 235,524 to 236,882
_00204
ECD_00205: ECD_00205 - hydroxyacylglutathione hydrolase, at 236,954 to 237,709
_00205
ECD_00206: ECD_00206 - putative S-adenosyl-L-methionine-dependent methyltransferase, at 237,743 to 238,465
_00206
ECD_00207: ECD_00207 - ribonuclease HI, at 238,462 to 238,929
_00207
ECD_00208: ECD_00208 - DNA polymerase III epsilon subunit, at 238,994 to 239,725
_00208
Position (kb) 237
238
239 Strain fitness (log2 ratio) -1
0
1 at 236.895 kb on - strand at 236.920 kb on - strand at 236.963 kb on - strand at 237.155 kb on + strand, within ECD_00205 at 237.245 kb on + strand, within ECD_00205 at 237.446 kb on + strand, within ECD_00205 at 237.486 kb on + strand, within ECD_00205 at 237.486 kb on + strand, within ECD_00205 at 237.564 kb on - strand, within ECD_00205 at 237.584 kb on - strand, within ECD_00205 at 237.673 kb on - strand at 237.673 kb on - strand at 237.673 kb on - strand at 237.694 kb on + strand at 237.701 kb on - strand at 237.701 kb on - strand at 237.701 kb on - strand at 237.715 kb on - strand at 237.715 kb on - strand at 237.721 kb on + strand at 238.036 kb on + strand, within ECD_00206 at 238.036 kb on + strand, within ECD_00206 at 238.036 kb on + strand, within ECD_00206 at 238.036 kb on + strand, within ECD_00206 at 238.037 kb on - strand, within ECD_00206 at 238.037 kb on - strand, within ECD_00206 at 238.037 kb on - strand, within ECD_00206 at 238.037 kb on - strand, within ECD_00206 at 238.037 kb on - strand, within ECD_00206 at 238.037 kb on - strand, within ECD_00206 at 238.037 kb on - strand, within ECD_00206 at 238.135 kb on + strand, within ECD_00206 at 238.168 kb on - strand, within ECD_00206 at 238.205 kb on - strand, within ECD_00206 at 238.306 kb on - strand, within ECD_00206 at 238.338 kb on + strand, within ECD_00206 at 238.339 kb on - strand, within ECD_00206 at 238.345 kb on + strand, within ECD_00206 at 238.346 kb on - strand, within ECD_00206 at 238.346 kb on - strand, within ECD_00206 at 238.367 kb on - strand, within ECD_00206 at 238.451 kb on - strand at 238.982 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 236,895 - +0.2 236,920 - +0.1 236,963 - +0.1 237,155 + ECD_00205 0.27 -0.3 237,245 + ECD_00205 0.38 +0.1 237,446 + ECD_00205 0.65 +1.0 237,486 + ECD_00205 0.70 -1.7 237,486 + ECD_00205 0.70 +0.4 237,564 - ECD_00205 0.81 -0.4 237,584 - ECD_00205 0.83 -0.5 237,673 - -0.4 237,673 - +0.1 237,673 - -0.7 237,694 + -0.1 237,701 - +0.7 237,701 - -0.7 237,701 - -1.4 237,715 - +0.4 237,715 - +0.4 237,721 + -0.7 238,036 + ECD_00206 0.41 +1.2 238,036 + ECD_00206 0.41 +0.4 238,036 + ECD_00206 0.41 +1.4 238,036 + ECD_00206 0.41 -0.8 238,037 - ECD_00206 0.41 +0.4 238,037 - ECD_00206 0.41 +0.8 238,037 - ECD_00206 0.41 +0.3 238,037 - ECD_00206 0.41 +0.8 238,037 - ECD_00206 0.41 +0.6 238,037 - ECD_00206 0.41 +0.6 238,037 - ECD_00206 0.41 +0.5 238,135 + ECD_00206 0.54 +0.2 238,168 - ECD_00206 0.59 -0.8 238,205 - ECD_00206 0.64 +0.7 238,306 - ECD_00206 0.78 +0.1 238,338 + ECD_00206 0.82 +0.1 238,339 - ECD_00206 0.82 +0.7 238,345 + ECD_00206 0.83 +0.5 238,346 - ECD_00206 0.83 +1.2 238,346 - ECD_00206 0.83 -0.0 238,367 - ECD_00206 0.86 +0.1 238,451 - +0.3 238,982 + -1.0
Or see this region's nucleotide sequence