Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00152 and ECD_00153 are separated by 157 nucleotides ECD_00153 and ECD_00154 are separated by 224 nucleotides
ECD_00152: ECD_00152 - iron(3+)-hydroxamate import ABC transporter permease, at 174,305 to 176,287
_00152
ECD_00153: ECD_00153 - glutamate-1-semialdehyde aminotransferase (aminomutase), at 176,445 to 177,725
_00153
ECD_00154: ECD_00154 - H(+)/Cl(-) exchange transporter, at 177,950 to 179,371
_00154
Position (kb) 176
177
178 Strain fitness (log2 ratio) -1
0
1 at 175.531 kb on + strand, within ECD_00152 at 175.532 kb on - strand, within ECD_00152 at 175.534 kb on + strand, within ECD_00152 at 175.534 kb on + strand, within ECD_00152 at 175.699 kb on + strand, within ECD_00152 at 175.699 kb on + strand, within ECD_00152 at 176.092 kb on + strand at 176.136 kb on + strand at 176.136 kb on + strand at 176.136 kb on + strand at 176.261 kb on + strand at 176.296 kb on + strand at 176.297 kb on - strand at 176.298 kb on + strand at 176.400 kb on - strand at 177.768 kb on + strand at 177.768 kb on + strand at 177.768 kb on + strand at 177.769 kb on - strand at 177.769 kb on - strand at 177.769 kb on - strand at 177.769 kb on - strand at 177.769 kb on - strand at 177.769 kb on - strand at 177.769 kb on - strand at 177.779 kb on + strand at 177.846 kb on - strand at 177.870 kb on + strand at 177.927 kb on + strand at 177.972 kb on + strand at 178.061 kb on - strand at 178.141 kb on + strand, within ECD_00154 at 178.156 kb on - strand, within ECD_00154 at 178.156 kb on - strand, within ECD_00154 at 178.159 kb on + strand, within ECD_00154 at 178.160 kb on - strand, within ECD_00154 at 178.169 kb on - strand, within ECD_00154 at 178.429 kb on + strand, within ECD_00154 at 178.429 kb on + strand, within ECD_00154 at 178.475 kb on - strand, within ECD_00154 at 178.578 kb on - strand, within ECD_00154 at 178.595 kb on - strand, within ECD_00154 at 178.607 kb on - strand, within ECD_00154 at 178.618 kb on + strand, within ECD_00154 at 178.618 kb on + strand, within ECD_00154 at 178.630 kb on + strand, within ECD_00154 at 178.630 kb on + strand, within ECD_00154 at 178.631 kb on - strand, within ECD_00154 at 178.631 kb on - strand, within ECD_00154 at 178.631 kb on - strand, within ECD_00154 at 178.631 kb on - strand, within ECD_00154 at 178.697 kb on - strand, within ECD_00154 at 178.713 kb on - strand, within ECD_00154
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 175,531 + ECD_00152 0.62 -0.3 175,532 - ECD_00152 0.62 -0.4 175,534 + ECD_00152 0.62 -0.3 175,534 + ECD_00152 0.62 -0.3 175,699 + ECD_00152 0.70 -0.6 175,699 + ECD_00152 0.70 -0.0 176,092 + +0.7 176,136 + -0.7 176,136 + +0.3 176,136 + -0.2 176,261 + -1.3 176,296 + +0.6 176,297 - -0.4 176,298 + +0.0 176,400 - +0.1 177,768 + -1.3 177,768 + -0.5 177,768 + -1.1 177,769 - +0.7 177,769 - -0.3 177,769 - +0.2 177,769 - -0.4 177,769 - -0.6 177,769 - -0.3 177,769 - +0.2 177,779 + -0.1 177,846 - +0.1 177,870 + -0.2 177,927 + -0.2 177,972 + -0.2 178,061 - +1.1 178,141 + ECD_00154 0.13 -0.7 178,156 - ECD_00154 0.14 -0.4 178,156 - ECD_00154 0.14 -0.1 178,159 + ECD_00154 0.15 -0.2 178,160 - ECD_00154 0.15 -0.6 178,169 - ECD_00154 0.15 -0.5 178,429 + ECD_00154 0.34 -0.2 178,429 + ECD_00154 0.34 +0.2 178,475 - ECD_00154 0.37 +0.2 178,578 - ECD_00154 0.44 +0.2 178,595 - ECD_00154 0.45 -0.0 178,607 - ECD_00154 0.46 -0.0 178,618 + ECD_00154 0.47 +0.3 178,618 + ECD_00154 0.47 -0.5 178,630 + ECD_00154 0.48 +0.4 178,630 + ECD_00154 0.48 +1.4 178,631 - ECD_00154 0.48 -1.0 178,631 - ECD_00154 0.48 -0.5 178,631 - ECD_00154 0.48 -0.4 178,631 - ECD_00154 0.48 -1.1 178,697 - ECD_00154 0.53 +0.7 178,713 - ECD_00154 0.54 +0.1
Or see this region's nucleotide sequence