Strain Fitness in Escherichia coli BL21 around ECD_03937

Experiment: N4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03936 and ECD_03937 are separated by 151 nucleotides ECD_03936: ECD_03936 - guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter, at 4,185,889 to 4,187,238 _03936 ECD_03937: ECD_03937 - putative cation/proton antiporter, at 4,187,390 to 4,189,039 _03937 Position (kb) 4187 4188 4189 4190Strain fitness (log2 ratio) -1 0 1at 4186.443 kb on + strand, within ECD_03936at 4186.443 kb on + strand, within ECD_03936at 4186.443 kb on + strand, within ECD_03936at 4186.443 kb on + strand, within ECD_03936at 4186.444 kb on - strand, within ECD_03936at 4186.444 kb on - strand, within ECD_03936at 4186.444 kb on - strand, within ECD_03936at 4186.455 kb on - strand, within ECD_03936at 4186.455 kb on - strand, within ECD_03936at 4186.636 kb on - strand, within ECD_03936at 4186.655 kb on + strand, within ECD_03936at 4186.844 kb on + strand, within ECD_03936at 4186.846 kb on + strand, within ECD_03936at 4186.846 kb on + strand, within ECD_03936at 4186.846 kb on + strand, within ECD_03936at 4186.847 kb on - strand, within ECD_03936at 4186.847 kb on - strand, within ECD_03936at 4186.847 kb on - strand, within ECD_03936at 4186.847 kb on - strand, within ECD_03936at 4186.882 kb on - strand, within ECD_03936at 4186.951 kb on + strand, within ECD_03936at 4186.951 kb on + strand, within ECD_03936at 4186.966 kb on + strand, within ECD_03936at 4186.990 kb on + strand, within ECD_03936at 4186.990 kb on + strand, within ECD_03936at 4186.990 kb on + strand, within ECD_03936at 4186.990 kb on + strand, within ECD_03936at 4186.990 kb on + strand, within ECD_03936at 4186.990 kb on + strand, within ECD_03936at 4186.991 kb on - strand, within ECD_03936at 4186.991 kb on - strand, within ECD_03936at 4186.991 kb on - strand, within ECD_03936at 4187.094 kb on + strand, within ECD_03936at 4187.094 kb on + strand, within ECD_03936at 4187.095 kb on - strand, within ECD_03936at 4187.102 kb on + strand, within ECD_03936at 4187.236 kb on + strandat 4187.236 kb on + strandat 4187.237 kb on - strandat 4187.237 kb on - strandat 4187.410 kb on - strandat 4187.416 kb on - strandat 4187.562 kb on + strand, within ECD_03937at 4187.698 kb on + strand, within ECD_03937at 4187.703 kb on - strand, within ECD_03937at 4187.953 kb on - strand, within ECD_03937at 4187.996 kb on + strand, within ECD_03937at 4188.087 kb on - strand, within ECD_03937at 4188.104 kb on - strand, within ECD_03937at 4188.258 kb on + strand, within ECD_03937at 4188.258 kb on + strand, within ECD_03937at 4188.259 kb on - strand, within ECD_03937at 4188.316 kb on + strand, within ECD_03937at 4188.317 kb on - strand, within ECD_03937at 4188.350 kb on - strand, within ECD_03937at 4188.358 kb on - strand, within ECD_03937at 4188.358 kb on - strand, within ECD_03937at 4188.359 kb on + strand, within ECD_03937at 4188.359 kb on + strand, within ECD_03937at 4188.359 kb on + strand, within ECD_03937at 4188.359 kb on + strand, within ECD_03937at 4188.360 kb on - strand, within ECD_03937at 4188.360 kb on - strand, within ECD_03937at 4188.360 kb on - strand, within ECD_03937at 4188.360 kb on - strand, within ECD_03937at 4188.360 kb on - strand, within ECD_03937at 4188.529 kb on + strand, within ECD_03937at 4188.553 kb on + strand, within ECD_03937at 4188.573 kb on - strand, within ECD_03937at 4188.640 kb on + strand, within ECD_03937at 4188.641 kb on - strand, within ECD_03937at 4188.641 kb on - strand, within ECD_03937at 4188.648 kb on + strand, within ECD_03937at 4188.649 kb on - strand, within ECD_03937at 4188.697 kb on + strand, within ECD_03937at 4188.697 kb on + strand, within ECD_03937at 4188.787 kb on + strand, within ECD_03937at 4188.853 kb on + strand, within ECD_03937at 4188.854 kb on - strand, within ECD_03937at 4188.938 kb on + strandat 4189.021 kb on - strandat 4189.021 kb on - strandat 4189.142 kb on + strandat 4189.142 kb on + strandat 4189.247 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction N4
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4,186,443 + ECD_03936 0.41 -0.7
4,186,443 + ECD_03936 0.41 +0.7
4,186,443 + ECD_03936 0.41 +0.2
4,186,443 + ECD_03936 0.41 +0.4
4,186,444 - ECD_03936 0.41 -0.1
4,186,444 - ECD_03936 0.41 -0.9
4,186,444 - ECD_03936 0.41 -0.9
4,186,455 - ECD_03936 0.42 +1.1
4,186,455 - ECD_03936 0.42 +0.3
4,186,636 - ECD_03936 0.55 -0.5
4,186,655 + ECD_03936 0.57 +0.3
4,186,844 + ECD_03936 0.71 -0.4
4,186,846 + ECD_03936 0.71 +0.1
4,186,846 + ECD_03936 0.71 +0.4
4,186,846 + ECD_03936 0.71 +0.0
4,186,847 - ECD_03936 0.71 +0.7
4,186,847 - ECD_03936 0.71 -0.4
4,186,847 - ECD_03936 0.71 -0.1
4,186,847 - ECD_03936 0.71 -0.3
4,186,882 - ECD_03936 0.74 -0.1
4,186,951 + ECD_03936 0.79 +0.8
4,186,951 + ECD_03936 0.79 +1.3
4,186,966 + ECD_03936 0.80 +0.4
4,186,990 + ECD_03936 0.82 +0.7
4,186,990 + ECD_03936 0.82 -0.0
4,186,990 + ECD_03936 0.82 -0.6
4,186,990 + ECD_03936 0.82 -0.7
4,186,990 + ECD_03936 0.82 +0.4
4,186,990 + ECD_03936 0.82 +0.1
4,186,991 - ECD_03936 0.82 -0.5
4,186,991 - ECD_03936 0.82 +0.2
4,186,991 - ECD_03936 0.82 -0.4
4,187,094 + ECD_03936 0.89 -0.1
4,187,094 + ECD_03936 0.89 +0.5
4,187,095 - ECD_03936 0.89 +0.8
4,187,102 + ECD_03936 0.90 -0.2
4,187,236 + -0.1
4,187,236 + -0.3
4,187,237 - +0.6
4,187,237 - -0.3
4,187,410 - +0.2
4,187,416 - +0.5
4,187,562 + ECD_03937 0.10 +0.4
4,187,698 + ECD_03937 0.19 +0.5
4,187,703 - ECD_03937 0.19 -0.1
4,187,953 - ECD_03937 0.34 -0.1
4,187,996 + ECD_03937 0.37 +0.6
4,188,087 - ECD_03937 0.42 -0.2
4,188,104 - ECD_03937 0.43 -0.8
4,188,258 + ECD_03937 0.53 -0.5
4,188,258 + ECD_03937 0.53 +0.5
4,188,259 - ECD_03937 0.53 +0.1
4,188,316 + ECD_03937 0.56 +0.0
4,188,317 - ECD_03937 0.56 -0.0
4,188,350 - ECD_03937 0.58 -0.0
4,188,358 - ECD_03937 0.59 -0.2
4,188,358 - ECD_03937 0.59 +0.1
4,188,359 + ECD_03937 0.59 +0.5
4,188,359 + ECD_03937 0.59 +0.6
4,188,359 + ECD_03937 0.59 +0.4
4,188,359 + ECD_03937 0.59 +1.2
4,188,360 - ECD_03937 0.59 -1.4
4,188,360 - ECD_03937 0.59 +0.4
4,188,360 - ECD_03937 0.59 +0.1
4,188,360 - ECD_03937 0.59 -0.4
4,188,360 - ECD_03937 0.59 +0.8
4,188,529 + ECD_03937 0.69 -0.4
4,188,553 + ECD_03937 0.70 +0.1
4,188,573 - ECD_03937 0.72 +0.5
4,188,640 + ECD_03937 0.76 +0.8
4,188,641 - ECD_03937 0.76 +0.2
4,188,641 - ECD_03937 0.76 +1.1
4,188,648 + ECD_03937 0.76 +0.5
4,188,649 - ECD_03937 0.76 +0.3
4,188,697 + ECD_03937 0.79 +1.0
4,188,697 + ECD_03937 0.79 +0.1
4,188,787 + ECD_03937 0.85 +0.4
4,188,853 + ECD_03937 0.89 +0.6
4,188,854 - ECD_03937 0.89 -0.5
4,188,938 + -0.1
4,189,021 - +0.2
4,189,021 - -0.3
4,189,142 + -0.2
4,189,142 + +0.4
4,189,247 - -0.3

Or see this region's nucleotide sequence