Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03767 and ECD_03768 are separated by 167 nucleotides ECD_03768 and ECD_03769 are separated by 33 nucleotides ECD_03769 and ECD_03770 are separated by 98 nucleotides
ECD_03767: ECD_03767 - 3-sulfolactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent, at 3,979,262 to 3,980,158
_03767
ECD_03768: ECD_03768 - 6-deoxy-6-sulfofructose kinase, at 3,980,326 to 3,981,222
_03768
ECD_03769: ECD_03769 - putative transcriptional regulator for sulfoquinovose utilization, at 3,981,256 to 3,982,041
_03769
ECD_03770: ECD_03770 - alpha-D-glucose-1-phosphate phosphatase, anomer-specific, at 3,982,140 to 3,982,739
_03770
Position (kb)
3980
3981
3982 Strain fitness (log2 ratio)
-2
-1
0
1 at 3979.360 kb on + strand, within ECD_03767 at 3979.360 kb on + strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.362 kb on + strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.442 kb on - strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.757 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.790 kb on - strand, within ECD_03767 at 3979.850 kb on - strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.882 kb on - strand, within ECD_03767 at 3979.901 kb on - strand, within ECD_03767 at 3979.904 kb on + strand, within ECD_03767 at 3979.905 kb on - strand, within ECD_03767 at 3979.973 kb on - strand, within ECD_03767 at 3979.978 kb on + strand, within ECD_03767 at 3980.315 kb on - strand at 3980.349 kb on + strand at 3980.349 kb on + strand at 3980.349 kb on + strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.371 kb on + strand at 3980.371 kb on + strand at 3980.371 kb on + strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.374 kb on + strand at 3980.403 kb on + strand at 3980.407 kb on + strand at 3980.507 kb on + strand, within ECD_03768 at 3980.508 kb on - strand, within ECD_03768 at 3980.587 kb on - strand, within ECD_03768 at 3980.587 kb on - strand, within ECD_03768 at 3980.649 kb on + strand, within ECD_03768 at 3980.650 kb on - strand, within ECD_03768 at 3980.653 kb on + strand, within ECD_03768 at 3980.653 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.736 kb on - strand, within ECD_03768 at 3980.736 kb on - strand, within ECD_03768 at 3980.846 kb on + strand, within ECD_03768 at 3980.846 kb on + strand, within ECD_03768 at 3980.847 kb on - strand, within ECD_03768 at 3980.847 kb on - strand, within ECD_03768 at 3981.035 kb on + strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.040 kb on - strand, within ECD_03768 at 3981.040 kb on - strand, within ECD_03768 at 3981.104 kb on + strand, within ECD_03768 at 3981.326 kb on - strand at 3981.326 kb on - strand at 3981.326 kb on - strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.328 kb on - strand at 3981.333 kb on + strand at 3981.333 kb on + strand at 3981.334 kb on - strand at 3981.417 kb on + strand, within ECD_03769 at 3981.532 kb on + strand, within ECD_03769 at 3981.532 kb on + strand, within ECD_03769 at 3981.532 kb on + strand, within ECD_03769 at 3981.555 kb on - strand, within ECD_03769 at 3981.555 kb on - strand, within ECD_03769 at 3981.558 kb on + strand, within ECD_03769 at 3981.599 kb on + strand, within ECD_03769 at 3981.604 kb on - strand, within ECD_03769 at 3981.610 kb on - strand, within ECD_03769 at 3981.610 kb on - strand, within ECD_03769 at 3981.711 kb on + strand, within ECD_03769 at 3981.715 kb on - strand, within ECD_03769 at 3981.769 kb on + strand, within ECD_03769 at 3981.776 kb on + strand, within ECD_03769 at 3981.777 kb on - strand, within ECD_03769 at 3981.837 kb on + strand, within ECD_03769 at 3981.897 kb on + strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.995 kb on + strand at 3982.070 kb on - strand at 3982.070 kb on - strand at 3982.070 kb on - strand at 3982.081 kb on + strand at 3982.081 kb on + strand at 3982.081 kb on + strand at 3982.082 kb on - strand at 3982.111 kb on - strand at 3982.146 kb on + strand at 3982.147 kb on - strand at 3982.147 kb on - strand at 3982.149 kb on - strand at 3982.149 kb on - strand at 3982.160 kb on - strand at 3982.216 kb on + strand, within ECD_03770
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,979,360 + ECD_03767 0.11 -0.4 3,979,360 + ECD_03767 0.11 +0.5 3,979,361 - ECD_03767 0.11 -0.7 3,979,361 - ECD_03767 0.11 -0.1 3,979,362 + ECD_03767 0.11 -0.5 3,979,363 - ECD_03767 0.11 +0.4 3,979,363 - ECD_03767 0.11 +0.4 3,979,442 - ECD_03767 0.20 -0.1 3,979,632 + ECD_03767 0.41 -0.1 3,979,632 + ECD_03767 0.41 -0.1 3,979,632 + ECD_03767 0.41 -0.1 3,979,633 - ECD_03767 0.41 +0.5 3,979,633 - ECD_03767 0.41 -0.1 3,979,633 - ECD_03767 0.41 +0.4 3,979,757 + ECD_03767 0.55 +0.9 3,979,789 + ECD_03767 0.59 +0.8 3,979,789 + ECD_03767 0.59 -0.5 3,979,789 + ECD_03767 0.59 +0.3 3,979,790 - ECD_03767 0.59 +0.9 3,979,850 - ECD_03767 0.66 -1.1 3,979,879 + ECD_03767 0.69 -0.9 3,979,879 + ECD_03767 0.69 +0.1 3,979,879 + ECD_03767 0.69 +0.3 3,979,879 + ECD_03767 0.69 +0.5 3,979,879 + ECD_03767 0.69 +0.1 3,979,879 + ECD_03767 0.69 -0.2 3,979,879 + ECD_03767 0.69 -1.0 3,979,880 - ECD_03767 0.69 +0.6 3,979,880 - ECD_03767 0.69 +0.1 3,979,880 - ECD_03767 0.69 -0.0 3,979,880 - ECD_03767 0.69 +1.5 3,979,880 - ECD_03767 0.69 -1.7 3,979,880 - ECD_03767 0.69 -2.4 3,979,882 - ECD_03767 0.69 -0.9 3,979,901 - ECD_03767 0.71 -0.1 3,979,904 + ECD_03767 0.72 +0.1 3,979,905 - ECD_03767 0.72 +0.7 3,979,973 - ECD_03767 0.79 +0.2 3,979,978 + ECD_03767 0.80 +0.1 3,980,315 - +0.4 3,980,349 + -0.4 3,980,349 + +1.0 3,980,349 + +0.0 3,980,350 - +0.7 3,980,350 - +0.7 3,980,350 - -0.1 3,980,350 - -0.4 3,980,350 - +0.5 3,980,371 + -0.3 3,980,371 + +1.1 3,980,371 + -0.2 3,980,372 - +0.1 3,980,372 - +1.0 3,980,372 - -0.4 3,980,372 - -0.5 3,980,374 + +0.7 3,980,403 + +0.1 3,980,407 + +0.7 3,980,507 + ECD_03768 0.20 -0.2 3,980,508 - ECD_03768 0.20 -0.5 3,980,587 - ECD_03768 0.29 -0.6 3,980,587 - ECD_03768 0.29 +0.2 3,980,649 + ECD_03768 0.36 -0.1 3,980,650 - ECD_03768 0.36 +1.1 3,980,653 + ECD_03768 0.36 -1.7 3,980,653 + ECD_03768 0.36 +0.2 3,980,735 + ECD_03768 0.46 +0.7 3,980,735 + ECD_03768 0.46 -0.6 3,980,735 + ECD_03768 0.46 -0.3 3,980,735 + ECD_03768 0.46 +0.2 3,980,735 + ECD_03768 0.46 -0.7 3,980,735 + ECD_03768 0.46 +0.2 3,980,736 - ECD_03768 0.46 +0.9 3,980,736 - ECD_03768 0.46 +0.7 3,980,846 + ECD_03768 0.58 -0.2 3,980,846 + ECD_03768 0.58 -1.2 3,980,847 - ECD_03768 0.58 -0.4 3,980,847 - ECD_03768 0.58 +0.2 3,981,035 + ECD_03768 0.79 +0.1 3,981,036 - ECD_03768 0.79 -0.2 3,981,036 - ECD_03768 0.79 +0.2 3,981,036 - ECD_03768 0.79 -0.2 3,981,036 - ECD_03768 0.79 +1.3 3,981,040 - ECD_03768 0.80 +1.5 3,981,040 - ECD_03768 0.80 +0.1 3,981,104 + ECD_03768 0.87 +0.1 3,981,326 - -0.2 3,981,326 - -1.8 3,981,326 - -0.3 3,981,327 + -0.6 3,981,327 + -0.6 3,981,327 + -0.8 3,981,327 + +0.5 3,981,327 + +0.4 3,981,327 + -1.1 3,981,327 + -1.0 3,981,328 - +0.4 3,981,333 + -0.9 3,981,333 + -1.2 3,981,334 - -0.7 3,981,417 + ECD_03769 0.20 -0.5 3,981,532 + ECD_03769 0.35 -0.7 3,981,532 + ECD_03769 0.35 +0.8 3,981,532 + ECD_03769 0.35 -0.4 3,981,555 - ECD_03769 0.38 +0.0 3,981,555 - ECD_03769 0.38 -0.1 3,981,558 + ECD_03769 0.38 -0.9 3,981,599 + ECD_03769 0.44 -0.4 3,981,604 - ECD_03769 0.44 +0.5 3,981,610 - ECD_03769 0.45 +0.1 3,981,610 - ECD_03769 0.45 +0.0 3,981,711 + ECD_03769 0.58 -0.9 3,981,715 - ECD_03769 0.58 -0.5 3,981,769 + ECD_03769 0.65 +0.5 3,981,776 + ECD_03769 0.66 +0.3 3,981,777 - ECD_03769 0.66 +0.4 3,981,837 + ECD_03769 0.74 -1.3 3,981,897 + ECD_03769 0.82 -0.4 3,981,898 - ECD_03769 0.82 -0.7 3,981,898 - ECD_03769 0.82 +0.3 3,981,898 - ECD_03769 0.82 +0.4 3,981,898 - ECD_03769 0.82 -0.7 3,981,901 + ECD_03769 0.82 +0.7 3,981,901 + ECD_03769 0.82 +0.6 3,981,901 + ECD_03769 0.82 -0.2 3,981,901 + ECD_03769 0.82 +0.1 3,981,901 + ECD_03769 0.82 -0.3 3,981,902 - ECD_03769 0.82 -0.2 3,981,902 - ECD_03769 0.82 +0.9 3,981,902 - ECD_03769 0.82 +0.5 3,981,902 - ECD_03769 0.82 -0.5 3,981,995 + -0.2 3,982,070 - +0.3 3,982,070 - +0.4 3,982,070 - +0.7 3,982,081 + -0.2 3,982,081 + +1.0 3,982,081 + -1.7 3,982,082 - +0.9 3,982,111 - +0.5 3,982,146 + -0.2 3,982,147 - +0.6 3,982,147 - -0.1 3,982,149 - -0.1 3,982,149 - -1.2 3,982,160 - -0.5 3,982,216 + ECD_03770 0.13 -0.2
Or see this region's nucleotide sequence