Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03391 and ECD_03392 overlap by 4 nucleotides ECD_03392 and ECD_03393 are separated by 10 nucleotides ECD_03393 and ECD_03394 are separated by 9 nucleotides
ECD_03391: ECD_03391 - dipeptide/heme ABC transporter ATPase, at 3,564,018 to 3,565,022
_03391
ECD_03392: ECD_03392 - dipeptide/heme ABC transporter ATPase, at 3,565,019 to 3,566,002
_03392
ECD_03393: ECD_03393 - dipeptide/heme ABC transporter permease, at 3,566,013 to 3,566,915
_03393
ECD_03394: ECD_03394 - dipeptide/heme ABC transporter permease, at 3,566,925 to 3,567,944
_03394
Position (kb)
3566
3567 Strain fitness (log2 ratio)
-1
0
1 at 3565.022 kb on + strand at 3565.022 kb on + strand at 3565.022 kb on + strand at 3565.023 kb on - strand at 3565.170 kb on + strand, within ECD_03392 at 3565.171 kb on - strand, within ECD_03392 at 3565.255 kb on + strand, within ECD_03392 at 3565.255 kb on + strand, within ECD_03392 at 3565.257 kb on + strand, within ECD_03392 at 3565.257 kb on + strand, within ECD_03392 at 3565.320 kb on + strand, within ECD_03392 at 3565.320 kb on + strand, within ECD_03392 at 3565.320 kb on + strand, within ECD_03392 at 3565.320 kb on + strand, within ECD_03392 at 3565.321 kb on - strand, within ECD_03392 at 3565.321 kb on - strand, within ECD_03392 at 3565.321 kb on - strand, within ECD_03392 at 3565.321 kb on - strand, within ECD_03392 at 3565.321 kb on - strand, within ECD_03392 at 3565.337 kb on - strand, within ECD_03392 at 3565.337 kb on - strand, within ECD_03392 at 3565.372 kb on + strand, within ECD_03392 at 3565.373 kb on - strand, within ECD_03392 at 3565.373 kb on - strand, within ECD_03392 at 3565.376 kb on + strand, within ECD_03392 at 3565.407 kb on - strand, within ECD_03392 at 3565.407 kb on - strand, within ECD_03392 at 3565.418 kb on + strand, within ECD_03392 at 3565.418 kb on + strand, within ECD_03392 at 3565.655 kb on - strand, within ECD_03392 at 3565.686 kb on + strand, within ECD_03392 at 3565.686 kb on + strand, within ECD_03392 at 3565.686 kb on + strand, within ECD_03392 at 3565.687 kb on - strand, within ECD_03392 at 3565.771 kb on + strand, within ECD_03392 at 3565.771 kb on + strand, within ECD_03392 at 3565.772 kb on - strand, within ECD_03392 at 3565.913 kb on + strand at 3565.914 kb on - strand at 3565.914 kb on - strand at 3565.982 kb on - strand at 3565.985 kb on + strand at 3565.986 kb on - strand at 3565.991 kb on + strand at 3565.992 kb on - strand at 3565.994 kb on + strand at 3566.014 kb on + strand at 3566.014 kb on + strand at 3566.014 kb on + strand at 3566.015 kb on - strand at 3566.066 kb on + strand at 3566.066 kb on + strand at 3566.291 kb on + strand, within ECD_03393 at 3566.291 kb on + strand, within ECD_03393 at 3566.389 kb on + strand, within ECD_03393 at 3566.390 kb on - strand, within ECD_03393 at 3566.514 kb on - strand, within ECD_03393 at 3566.543 kb on - strand, within ECD_03393 at 3566.573 kb on + strand, within ECD_03393 at 3566.574 kb on - strand, within ECD_03393 at 3566.592 kb on + strand, within ECD_03393 at 3566.592 kb on + strand, within ECD_03393 at 3566.592 kb on + strand, within ECD_03393 at 3566.629 kb on + strand, within ECD_03393 at 3566.629 kb on + strand, within ECD_03393 at 3566.630 kb on - strand, within ECD_03393 at 3566.630 kb on - strand, within ECD_03393 at 3566.630 kb on - strand, within ECD_03393 at 3566.630 kb on - strand, within ECD_03393 at 3566.659 kb on - strand, within ECD_03393 at 3566.659 kb on - strand, within ECD_03393 at 3566.752 kb on + strand, within ECD_03393 at 3566.752 kb on + strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.753 kb on - strand, within ECD_03393 at 3566.803 kb on + strand, within ECD_03393 at 3566.842 kb on + strand at 3566.843 kb on - strand at 3566.859 kb on + strand at 3566.927 kb on - strand at 3566.933 kb on + strand at 3566.963 kb on - strand at 3566.993 kb on + strand at 3567.015 kb on + strand at 3567.238 kb on + strand, within ECD_03394 at 3567.278 kb on + strand, within ECD_03394 at 3567.278 kb on + strand, within ECD_03394 at 3567.305 kb on + strand, within ECD_03394 at 3567.306 kb on - strand, within ECD_03394 at 3567.332 kb on + strand, within ECD_03394 at 3567.393 kb on - strand, within ECD_03394 at 3567.712 kb on - strand, within ECD_03394 at 3567.712 kb on - strand, within ECD_03394 at 3567.712 kb on - strand, within ECD_03394 at 3567.726 kb on - strand, within ECD_03394 at 3567.740 kb on - strand, within ECD_03394 at 3567.749 kb on - strand, within ECD_03394 at 3567.749 kb on - strand, within ECD_03394 at 3567.749 kb on - strand, within ECD_03394 at 3567.749 kb on - strand, within ECD_03394 at 3567.768 kb on - strand, within ECD_03394 at 3567.768 kb on - strand, within ECD_03394 at 3567.772 kb on - strand, within ECD_03394 at 3567.772 kb on - strand, within ECD_03394 at 3567.887 kb on + strand at 3567.888 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,565,022 + +0.0 3,565,022 + -0.4 3,565,022 + +0.0 3,565,023 - +0.4 3,565,170 + ECD_03392 0.15 +0.0 3,565,171 - ECD_03392 0.15 -0.0 3,565,255 + ECD_03392 0.24 -1.1 3,565,255 + ECD_03392 0.24 -0.1 3,565,257 + ECD_03392 0.24 +1.3 3,565,257 + ECD_03392 0.24 +0.5 3,565,320 + ECD_03392 0.31 +0.8 3,565,320 + ECD_03392 0.31 +0.5 3,565,320 + ECD_03392 0.31 -0.1 3,565,320 + ECD_03392 0.31 -0.2 3,565,321 - ECD_03392 0.31 +0.7 3,565,321 - ECD_03392 0.31 +0.1 3,565,321 - ECD_03392 0.31 +0.9 3,565,321 - ECD_03392 0.31 +0.1 3,565,321 - ECD_03392 0.31 -0.0 3,565,337 - ECD_03392 0.32 +0.2 3,565,337 - ECD_03392 0.32 +0.5 3,565,372 + ECD_03392 0.36 +1.1 3,565,373 - ECD_03392 0.36 +0.8 3,565,373 - ECD_03392 0.36 -0.9 3,565,376 + ECD_03392 0.36 +0.7 3,565,407 - ECD_03392 0.39 +0.0 3,565,407 - ECD_03392 0.39 +0.4 3,565,418 + ECD_03392 0.41 +0.7 3,565,418 + ECD_03392 0.41 -0.2 3,565,655 - ECD_03392 0.65 +0.8 3,565,686 + ECD_03392 0.68 +0.2 3,565,686 + ECD_03392 0.68 +0.5 3,565,686 + ECD_03392 0.68 +0.9 3,565,687 - ECD_03392 0.68 +0.2 3,565,771 + ECD_03392 0.76 -0.6 3,565,771 + ECD_03392 0.76 -0.4 3,565,772 - ECD_03392 0.77 -0.3 3,565,913 + +1.1 3,565,914 - -0.2 3,565,914 - +1.3 3,565,982 - -0.9 3,565,985 + +1.4 3,565,986 - +0.5 3,565,991 + +0.6 3,565,992 - +0.2 3,565,994 + -0.3 3,566,014 + -0.2 3,566,014 + +0.1 3,566,014 + -1.0 3,566,015 - +0.2 3,566,066 + +0.9 3,566,066 + +0.1 3,566,291 + ECD_03393 0.31 -0.6 3,566,291 + ECD_03393 0.31 +1.1 3,566,389 + ECD_03393 0.42 +0.1 3,566,390 - ECD_03393 0.42 -0.4 3,566,514 - ECD_03393 0.55 +0.3 3,566,543 - ECD_03393 0.59 +0.2 3,566,573 + ECD_03393 0.62 -0.1 3,566,574 - ECD_03393 0.62 -0.4 3,566,592 + ECD_03393 0.64 -0.1 3,566,592 + ECD_03393 0.64 -0.3 3,566,592 + ECD_03393 0.64 +0.4 3,566,629 + ECD_03393 0.68 -0.1 3,566,629 + ECD_03393 0.68 +0.6 3,566,630 - ECD_03393 0.68 +0.4 3,566,630 - ECD_03393 0.68 +0.9 3,566,630 - ECD_03393 0.68 -0.6 3,566,630 - ECD_03393 0.68 +0.0 3,566,659 - ECD_03393 0.72 +0.1 3,566,659 - ECD_03393 0.72 +0.6 3,566,752 + ECD_03393 0.82 -0.1 3,566,752 + ECD_03393 0.82 -0.1 3,566,753 - ECD_03393 0.82 -0.8 3,566,753 - ECD_03393 0.82 +0.5 3,566,753 - ECD_03393 0.82 -0.1 3,566,753 - ECD_03393 0.82 +1.4 3,566,753 - ECD_03393 0.82 -0.1 3,566,753 - ECD_03393 0.82 +0.1 3,566,753 - ECD_03393 0.82 +0.9 3,566,753 - ECD_03393 0.82 +0.5 3,566,803 + ECD_03393 0.87 +0.1 3,566,842 + +0.0 3,566,843 - +0.0 3,566,859 + -0.4 3,566,927 - +0.2 3,566,933 + +0.3 3,566,963 - -0.8 3,566,993 + -0.2 3,567,015 + +0.5 3,567,238 + ECD_03394 0.31 -0.4 3,567,278 + ECD_03394 0.35 -0.4 3,567,278 + ECD_03394 0.35 +0.4 3,567,305 + ECD_03394 0.37 +0.4 3,567,306 - ECD_03394 0.37 +0.2 3,567,332 + ECD_03394 0.40 +0.6 3,567,393 - ECD_03394 0.46 -0.9 3,567,712 - ECD_03394 0.77 +0.9 3,567,712 - ECD_03394 0.77 -0.4 3,567,712 - ECD_03394 0.77 -0.5 3,567,726 - ECD_03394 0.79 +0.1 3,567,740 - ECD_03394 0.80 -0.8 3,567,749 - ECD_03394 0.81 -0.6 3,567,749 - ECD_03394 0.81 -0.1 3,567,749 - ECD_03394 0.81 +1.4 3,567,749 - ECD_03394 0.81 +0.4 3,567,768 - ECD_03394 0.83 +0.3 3,567,768 - ECD_03394 0.83 +0.3 3,567,772 - ECD_03394 0.83 -0.1 3,567,772 - ECD_03394 0.83 -0.6 3,567,887 + +0.2 3,567,888 - -0.7
Or see this region's nucleotide sequence