Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03347 and ECD_03348 are separated by 202 nucleotides ECD_03348 and ECD_03349 are separated by 71 nucleotides
ECD_03347: ECD_03347 - oligopeptidase A, at 3,505,526 to 3,507,568
_03347
ECD_03348: ECD_03348 - 23S rRNA m(6)A2030 methyltransferase, SAM-dependent, at 3,507,771 to 3,508,613
_03348
ECD_03349: ECD_03349 - glutathione oxidoreductase, at 3,508,685 to 3,510,037
_03349
Position (kb)
3507
3508
3509 Strain fitness (log2 ratio)
-2
-1
0
1 at 3506.895 kb on + strand, within ECD_03347 at 3506.914 kb on - strand, within ECD_03347 at 3507.072 kb on + strand, within ECD_03347 at 3507.115 kb on - strand, within ECD_03347 at 3507.115 kb on - strand, within ECD_03347 at 3507.131 kb on + strand, within ECD_03347 at 3507.250 kb on - strand, within ECD_03347 at 3507.250 kb on - strand, within ECD_03347 at 3507.250 kb on - strand, within ECD_03347 at 3507.282 kb on + strand, within ECD_03347 at 3507.429 kb on + strand at 3507.429 kb on + strand at 3507.429 kb on + strand at 3507.430 kb on - strand at 3507.430 kb on - strand at 3507.430 kb on - strand at 3507.617 kb on + strand at 3507.621 kb on + strand at 3507.621 kb on + strand at 3507.621 kb on + strand at 3507.621 kb on + strand at 3507.622 kb on - strand at 3507.622 kb on - strand at 3507.622 kb on - strand at 3507.631 kb on - strand at 3507.631 kb on - strand at 3507.631 kb on - strand at 3507.631 kb on - strand at 3507.631 kb on - strand at 3507.641 kb on + strand at 3507.702 kb on + strand at 3507.702 kb on + strand at 3507.703 kb on - strand at 3507.703 kb on - strand at 3507.766 kb on + strand at 3507.766 kb on + strand at 3507.821 kb on + strand at 3507.870 kb on - strand, within ECD_03348 at 3507.919 kb on + strand, within ECD_03348 at 3507.920 kb on - strand, within ECD_03348 at 3507.972 kb on - strand, within ECD_03348 at 3508.012 kb on - strand, within ECD_03348 at 3508.025 kb on - strand, within ECD_03348 at 3508.025 kb on - strand, within ECD_03348 at 3508.025 kb on - strand, within ECD_03348 at 3508.056 kb on + strand, within ECD_03348 at 3508.056 kb on + strand, within ECD_03348 at 3508.056 kb on + strand, within ECD_03348 at 3508.091 kb on - strand, within ECD_03348 at 3508.091 kb on - strand, within ECD_03348 at 3508.091 kb on - strand, within ECD_03348 at 3508.320 kb on + strand, within ECD_03348 at 3508.345 kb on - strand, within ECD_03348 at 3508.345 kb on - strand, within ECD_03348 at 3508.345 kb on - strand, within ECD_03348 at 3508.345 kb on - strand, within ECD_03348 at 3508.345 kb on - strand, within ECD_03348 at 3508.382 kb on + strand, within ECD_03348 at 3508.416 kb on - strand, within ECD_03348 at 3508.532 kb on + strand at 3508.533 kb on - strand at 3508.634 kb on + strand at 3508.634 kb on + strand at 3508.635 kb on - strand at 3508.635 kb on - strand at 3508.637 kb on + strand at 3508.637 kb on + strand at 3508.637 kb on + strand at 3508.637 kb on + strand at 3508.637 kb on + strand at 3508.638 kb on - strand at 3508.691 kb on - strand at 3508.697 kb on + strand at 3508.703 kb on + strand at 3508.703 kb on + strand at 3508.703 kb on + strand at 3508.703 kb on + strand at 3508.703 kb on + strand at 3508.703 kb on + strand at 3508.703 kb on + strand at 3508.704 kb on - strand at 3508.704 kb on - strand at 3508.704 kb on - strand at 3508.704 kb on - strand at 3508.761 kb on - strand at 3508.761 kb on - strand at 3508.876 kb on + strand, within ECD_03349 at 3508.876 kb on + strand, within ECD_03349 at 3508.877 kb on - strand, within ECD_03349 at 3508.877 kb on - strand, within ECD_03349 at 3508.877 kb on - strand, within ECD_03349 at 3508.877 kb on - strand, within ECD_03349 at 3508.881 kb on - strand, within ECD_03349 at 3508.881 kb on - strand, within ECD_03349 at 3508.955 kb on + strand, within ECD_03349 at 3508.956 kb on - strand, within ECD_03349 at 3508.966 kb on + strand, within ECD_03349 at 3508.972 kb on + strand, within ECD_03349 at 3508.972 kb on + strand, within ECD_03349 at 3508.972 kb on + strand, within ECD_03349 at 3508.973 kb on - strand, within ECD_03349 at 3509.013 kb on + strand, within ECD_03349 at 3509.013 kb on + strand, within ECD_03349 at 3509.141 kb on + strand, within ECD_03349 at 3509.146 kb on + strand, within ECD_03349 at 3509.213 kb on + strand, within ECD_03349
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,506,895 + ECD_03347 0.67 -0.2 3,506,914 - ECD_03347 0.68 -0.0 3,507,072 + ECD_03347 0.76 -0.4 3,507,115 - ECD_03347 0.78 +0.1 3,507,115 - ECD_03347 0.78 -0.7 3,507,131 + ECD_03347 0.79 -0.1 3,507,250 - ECD_03347 0.84 -0.4 3,507,250 - ECD_03347 0.84 -0.6 3,507,250 - ECD_03347 0.84 +0.5 3,507,282 + ECD_03347 0.86 +0.5 3,507,429 + -0.2 3,507,429 + -1.4 3,507,429 + +0.1 3,507,430 - -0.4 3,507,430 - +0.6 3,507,430 - -1.2 3,507,617 + +0.6 3,507,621 + -0.9 3,507,621 + +0.0 3,507,621 + -0.8 3,507,621 + -0.4 3,507,622 - -0.2 3,507,622 - -0.5 3,507,622 - +0.8 3,507,631 - -0.3 3,507,631 - +0.7 3,507,631 - +0.4 3,507,631 - +0.4 3,507,631 - +0.3 3,507,641 + -0.1 3,507,702 + -0.0 3,507,702 + +0.1 3,507,703 - +0.2 3,507,703 - +0.2 3,507,766 + -0.1 3,507,766 + +0.2 3,507,821 + -0.2 3,507,870 - ECD_03348 0.12 -0.9 3,507,919 + ECD_03348 0.18 +1.0 3,507,920 - ECD_03348 0.18 +1.3 3,507,972 - ECD_03348 0.24 +0.3 3,508,012 - ECD_03348 0.29 +0.5 3,508,025 - ECD_03348 0.30 -0.4 3,508,025 - ECD_03348 0.30 +0.3 3,508,025 - ECD_03348 0.30 +0.3 3,508,056 + ECD_03348 0.34 -0.7 3,508,056 + ECD_03348 0.34 -0.3 3,508,056 + ECD_03348 0.34 +0.0 3,508,091 - ECD_03348 0.38 -0.1 3,508,091 - ECD_03348 0.38 -0.5 3,508,091 - ECD_03348 0.38 +0.1 3,508,320 + ECD_03348 0.65 +0.2 3,508,345 - ECD_03348 0.68 -1.0 3,508,345 - ECD_03348 0.68 +0.2 3,508,345 - ECD_03348 0.68 +0.2 3,508,345 - ECD_03348 0.68 +0.4 3,508,345 - ECD_03348 0.68 -0.6 3,508,382 + ECD_03348 0.72 +0.0 3,508,416 - ECD_03348 0.77 -0.5 3,508,532 + +0.3 3,508,533 - +0.1 3,508,634 + -0.3 3,508,634 + -0.0 3,508,635 - +0.2 3,508,635 - -2.4 3,508,637 + -0.5 3,508,637 + +0.0 3,508,637 + +0.1 3,508,637 + -0.5 3,508,637 + -0.7 3,508,638 - +0.3 3,508,691 - -0.8 3,508,697 + -0.3 3,508,703 + +0.3 3,508,703 + +0.1 3,508,703 + -0.5 3,508,703 + -1.3 3,508,703 + -0.4 3,508,703 + +0.3 3,508,703 + -0.8 3,508,704 - -0.4 3,508,704 - -1.1 3,508,704 - +0.6 3,508,704 - +0.3 3,508,761 - -1.2 3,508,761 - -1.4 3,508,876 + ECD_03349 0.14 -0.7 3,508,876 + ECD_03349 0.14 -0.4 3,508,877 - ECD_03349 0.14 -0.7 3,508,877 - ECD_03349 0.14 -0.5 3,508,877 - ECD_03349 0.14 +0.3 3,508,877 - ECD_03349 0.14 -0.4 3,508,881 - ECD_03349 0.14 -0.2 3,508,881 - ECD_03349 0.14 -1.5 3,508,955 + ECD_03349 0.20 +0.3 3,508,956 - ECD_03349 0.20 -0.8 3,508,966 + ECD_03349 0.21 -1.7 3,508,972 + ECD_03349 0.21 -2.4 3,508,972 + ECD_03349 0.21 -0.1 3,508,972 + ECD_03349 0.21 +0.5 3,508,973 - ECD_03349 0.21 -0.5 3,509,013 + ECD_03349 0.24 -1.4 3,509,013 + ECD_03349 0.24 +0.0 3,509,141 + ECD_03349 0.34 -1.6 3,509,146 + ECD_03349 0.34 +0.0 3,509,213 + ECD_03349 0.39 +0.3
Or see this region's nucleotide sequence