Strain Fitness in Escherichia coli BL21 around ECD_03306

Experiment: N4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03305 and ECD_03306 overlap by 4 nucleotidesECD_03306 and ECD_03307 are separated by 47 nucleotides ECD_03305: ECD_03305 - branched-chain amino acid ABC transporter permease, at 3,456,573 to 3,457,850 _03305 ECD_03306: ECD_03306 - branched-chain amino acid ABC transporter permease, at 3,457,847 to 3,458,773 _03306 ECD_03307: ECD_03307 - leucine transporter subunit, at 3,458,821 to 3,459,930 _03307 Position (kb) 3457 3458 3459Strain fitness (log2 ratio) -2 -1 0 1 2at 3456.920 kb on + strand, within ECD_03305at 3456.933 kb on + strand, within ECD_03305at 3457.030 kb on - strand, within ECD_03305at 3457.030 kb on - strand, within ECD_03305at 3457.087 kb on + strand, within ECD_03305at 3457.087 kb on + strand, within ECD_03305at 3457.106 kb on + strand, within ECD_03305at 3457.188 kb on - strand, within ECD_03305at 3457.230 kb on + strand, within ECD_03305at 3457.231 kb on - strand, within ECD_03305at 3457.273 kb on + strand, within ECD_03305at 3457.274 kb on - strand, within ECD_03305at 3457.372 kb on + strand, within ECD_03305at 3457.376 kb on - strand, within ECD_03305at 3457.376 kb on - strand, within ECD_03305at 3457.399 kb on + strand, within ECD_03305at 3457.414 kb on + strand, within ECD_03305at 3457.415 kb on - strand, within ECD_03305at 3457.415 kb on - strand, within ECD_03305at 3457.489 kb on + strand, within ECD_03305at 3457.489 kb on + strand, within ECD_03305at 3457.489 kb on + strand, within ECD_03305at 3457.489 kb on + strand, within ECD_03305at 3457.489 kb on + strand, within ECD_03305at 3457.490 kb on - strand, within ECD_03305at 3457.490 kb on - strand, within ECD_03305at 3457.490 kb on - strand, within ECD_03305at 3457.490 kb on - strand, within ECD_03305at 3457.536 kb on - strand, within ECD_03305at 3457.773 kb on + strandat 3457.773 kb on + strandat 3457.835 kb on + strandat 3457.841 kb on + strandat 3457.841 kb on + strandat 3457.841 kb on + strandat 3457.842 kb on - strandat 3457.842 kb on - strandat 3457.842 kb on - strandat 3457.842 kb on - strandat 3457.842 kb on - strandat 3457.842 kb on - strandat 3457.851 kb on - strandat 3457.936 kb on + strandat 3457.936 kb on + strandat 3457.937 kb on - strandat 3457.938 kb on + strandat 3458.076 kb on + strand, within ECD_03306at 3458.076 kb on + strand, within ECD_03306at 3458.077 kb on - strand, within ECD_03306at 3458.176 kb on + strand, within ECD_03306at 3458.176 kb on + strand, within ECD_03306at 3458.176 kb on + strand, within ECD_03306at 3458.176 kb on + strand, within ECD_03306at 3458.284 kb on + strand, within ECD_03306at 3458.314 kb on + strand, within ECD_03306at 3458.314 kb on + strand, within ECD_03306at 3458.381 kb on + strand, within ECD_03306at 3458.381 kb on + strand, within ECD_03306at 3458.382 kb on - strand, within ECD_03306at 3458.413 kb on - strand, within ECD_03306at 3458.532 kb on - strand, within ECD_03306at 3458.619 kb on + strand, within ECD_03306at 3458.619 kb on + strand, within ECD_03306at 3458.619 kb on + strand, within ECD_03306at 3458.619 kb on + strand, within ECD_03306at 3458.619 kb on + strand, within ECD_03306at 3458.619 kb on + strand, within ECD_03306at 3458.620 kb on - strand, within ECD_03306at 3458.620 kb on - strand, within ECD_03306at 3458.620 kb on - strand, within ECD_03306at 3458.620 kb on - strand, within ECD_03306at 3458.632 kb on + strand, within ECD_03306at 3458.632 kb on + strand, within ECD_03306at 3458.632 kb on + strand, within ECD_03306at 3458.632 kb on + strand, within ECD_03306at 3458.632 kb on + strand, within ECD_03306at 3458.633 kb on - strand, within ECD_03306at 3458.633 kb on - strand, within ECD_03306at 3458.634 kb on + strand, within ECD_03306at 3458.634 kb on + strand, within ECD_03306at 3458.634 kb on + strand, within ECD_03306at 3458.634 kb on + strand, within ECD_03306at 3458.634 kb on + strand, within ECD_03306at 3458.635 kb on - strand, within ECD_03306at 3458.635 kb on - strand, within ECD_03306at 3458.635 kb on - strand, within ECD_03306at 3458.688 kb on + strandat 3458.689 kb on - strandat 3458.709 kb on + strandat 3458.754 kb on + strandat 3458.756 kb on + strandat 3458.773 kb on + strandat 3458.773 kb on + strandat 3458.774 kb on - strandat 3459.020 kb on + strand, within ECD_03307at 3459.020 kb on + strand, within ECD_03307at 3459.021 kb on - strand, within ECD_03307at 3459.035 kb on + strand, within ECD_03307at 3459.036 kb on - strand, within ECD_03307at 3459.107 kb on + strand, within ECD_03307at 3459.121 kb on - strand, within ECD_03307at 3459.195 kb on + strand, within ECD_03307at 3459.196 kb on - strand, within ECD_03307at 3459.340 kb on - strand, within ECD_03307at 3459.413 kb on + strand, within ECD_03307at 3459.414 kb on - strand, within ECD_03307at 3459.471 kb on - strand, within ECD_03307at 3459.471 kb on - strand, within ECD_03307at 3459.513 kb on + strand, within ECD_03307at 3459.519 kb on + strand, within ECD_03307at 3459.520 kb on - strand, within ECD_03307at 3459.582 kb on + strand, within ECD_03307at 3459.583 kb on - strand, within ECD_03307at 3459.596 kb on + strand, within ECD_03307at 3459.596 kb on + strand, within ECD_03307at 3459.596 kb on + strand, within ECD_03307at 3459.597 kb on - strand, within ECD_03307at 3459.600 kb on + strand, within ECD_03307at 3459.619 kb on - strand, within ECD_03307at 3459.647 kb on + strand, within ECD_03307at 3459.647 kb on + strand, within ECD_03307at 3459.651 kb on + strand, within ECD_03307at 3459.651 kb on + strand, within ECD_03307at 3459.651 kb on + strand, within ECD_03307at 3459.652 kb on - strand, within ECD_03307at 3459.652 kb on - strand, within ECD_03307at 3459.717 kb on - strand, within ECD_03307at 3459.745 kb on - strand, within ECD_03307at 3459.745 kb on - strand, within ECD_03307

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Per-strain Table

Position Strand Gene LocusTag Fraction N4
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3,456,920 + ECD_03305 0.27 -0.3
3,456,933 + ECD_03305 0.28 -0.1
3,457,030 - ECD_03305 0.36 +0.3
3,457,030 - ECD_03305 0.36 +0.3
3,457,087 + ECD_03305 0.40 +0.3
3,457,087 + ECD_03305 0.40 +0.9
3,457,106 + ECD_03305 0.42 +1.3
3,457,188 - ECD_03305 0.48 -0.2
3,457,230 + ECD_03305 0.51 +0.6
3,457,231 - ECD_03305 0.51 -0.2
3,457,273 + ECD_03305 0.55 +0.4
3,457,274 - ECD_03305 0.55 +0.5
3,457,372 + ECD_03305 0.63 +0.4
3,457,376 - ECD_03305 0.63 +0.1
3,457,376 - ECD_03305 0.63 +0.2
3,457,399 + ECD_03305 0.65 +0.1
3,457,414 + ECD_03305 0.66 +0.1
3,457,415 - ECD_03305 0.66 -0.1
3,457,415 - ECD_03305 0.66 +0.5
3,457,489 + ECD_03305 0.72 -2.3
3,457,489 + ECD_03305 0.72 +0.2
3,457,489 + ECD_03305 0.72 -0.3
3,457,489 + ECD_03305 0.72 -0.5
3,457,489 + ECD_03305 0.72 +0.7
3,457,490 - ECD_03305 0.72 +1.4
3,457,490 - ECD_03305 0.72 -0.7
3,457,490 - ECD_03305 0.72 -0.1
3,457,490 - ECD_03305 0.72 +0.2
3,457,536 - ECD_03305 0.75 -0.1
3,457,773 + +0.4
3,457,773 + -0.3
3,457,835 + +0.3
3,457,841 + +0.0
3,457,841 + -0.2
3,457,841 + +0.3
3,457,842 - +0.5
3,457,842 - +0.1
3,457,842 - -0.4
3,457,842 - -0.9
3,457,842 - -0.3
3,457,842 - -0.3
3,457,851 - -0.8
3,457,936 + +0.8
3,457,936 + +0.1
3,457,937 - +0.1
3,457,938 + +0.7
3,458,076 + ECD_03306 0.25 +0.6
3,458,076 + ECD_03306 0.25 -0.5
3,458,077 - ECD_03306 0.25 -0.1
3,458,176 + ECD_03306 0.35 -0.3
3,458,176 + ECD_03306 0.35 +0.1
3,458,176 + ECD_03306 0.35 +0.1
3,458,176 + ECD_03306 0.35 +0.1
3,458,284 + ECD_03306 0.47 -0.6
3,458,314 + ECD_03306 0.50 -0.7
3,458,314 + ECD_03306 0.50 +0.3
3,458,381 + ECD_03306 0.58 +0.0
3,458,381 + ECD_03306 0.58 +0.2
3,458,382 - ECD_03306 0.58 +0.3
3,458,413 - ECD_03306 0.61 +1.0
3,458,532 - ECD_03306 0.74 +0.5
3,458,619 + ECD_03306 0.83 +1.6
3,458,619 + ECD_03306 0.83 -0.6
3,458,619 + ECD_03306 0.83 -0.7
3,458,619 + ECD_03306 0.83 +0.2
3,458,619 + ECD_03306 0.83 +0.6
3,458,619 + ECD_03306 0.83 +0.3
3,458,620 - ECD_03306 0.83 +1.3
3,458,620 - ECD_03306 0.83 -0.3
3,458,620 - ECD_03306 0.83 +0.5
3,458,620 - ECD_03306 0.83 +0.3
3,458,632 + ECD_03306 0.85 +0.2
3,458,632 + ECD_03306 0.85 +0.2
3,458,632 + ECD_03306 0.85 +0.3
3,458,632 + ECD_03306 0.85 +1.2
3,458,632 + ECD_03306 0.85 +0.1
3,458,633 - ECD_03306 0.85 -0.8
3,458,633 - ECD_03306 0.85 +0.1
3,458,634 + ECD_03306 0.85 -0.5
3,458,634 + ECD_03306 0.85 +0.3
3,458,634 + ECD_03306 0.85 +0.5
3,458,634 + ECD_03306 0.85 +0.8
3,458,634 + ECD_03306 0.85 +0.3
3,458,635 - ECD_03306 0.85 +0.2
3,458,635 - ECD_03306 0.85 +0.2
3,458,635 - ECD_03306 0.85 -0.2
3,458,688 + +0.4
3,458,689 - +0.0
3,458,709 + +0.3
3,458,754 + +0.2
3,458,756 + +0.6
3,458,773 + -0.4
3,458,773 + +0.5
3,458,774 - +0.3
3,459,020 + ECD_03307 0.18 +1.0
3,459,020 + ECD_03307 0.18 -0.1
3,459,021 - ECD_03307 0.18 +0.2
3,459,035 + ECD_03307 0.19 +0.4
3,459,036 - ECD_03307 0.19 +0.3
3,459,107 + ECD_03307 0.26 -0.1
3,459,121 - ECD_03307 0.27 -0.3
3,459,195 + ECD_03307 0.34 +0.2
3,459,196 - ECD_03307 0.34 +0.3
3,459,340 - ECD_03307 0.47 -0.2
3,459,413 + ECD_03307 0.53 +0.1
3,459,414 - ECD_03307 0.53 -0.2
3,459,471 - ECD_03307 0.59 +0.2
3,459,471 - ECD_03307 0.59 -0.3
3,459,513 + ECD_03307 0.62 +0.7
3,459,519 + ECD_03307 0.63 +0.7
3,459,520 - ECD_03307 0.63 -0.1
3,459,582 + ECD_03307 0.69 -0.4
3,459,583 - ECD_03307 0.69 +0.1
3,459,596 + ECD_03307 0.70 +2.3
3,459,596 + ECD_03307 0.70 +0.2
3,459,596 + ECD_03307 0.70 +0.4
3,459,597 - ECD_03307 0.70 -0.0
3,459,600 + ECD_03307 0.70 +0.7
3,459,619 - ECD_03307 0.72 +0.2
3,459,647 + ECD_03307 0.74 +0.6
3,459,647 + ECD_03307 0.74 -0.0
3,459,651 + ECD_03307 0.75 -0.7
3,459,651 + ECD_03307 0.75 -0.1
3,459,651 + ECD_03307 0.75 -0.9
3,459,652 - ECD_03307 0.75 -0.2
3,459,652 - ECD_03307 0.75 +0.2
3,459,717 - ECD_03307 0.81 +0.6
3,459,745 - ECD_03307 0.83 +0.7
3,459,745 - ECD_03307 0.83 +0.2

Or see this region's nucleotide sequence