Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02773 and ECD_02774 are separated by 76 nucleotides ECD_02774 and ECD_02775 are separated by 94 nucleotides ECD_02775 and ECD_02776 are separated by 79 nucleotides
ECD_02773: ECD_02773 - D-galactose transporter, at 2,919,142 to 2,920,536
_02773
ECD_02774: ECD_02774 - Zn-dependent metalloprotease-related protein, at 2,920,613 to 2,921,110
_02774
ECD_02775: ECD_02775 - DNA-specific endonuclease I, at 2,921,205 to 2,921,912
_02775
ECD_02776: ECD_02776 - 16S rRNA m(3)U1498 methyltransferase, SAM-dependent, at 2,921,992 to 2,922,723
_02776
Position (kb)
2920
2921
2922 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2919.613 kb on + strand, within ECD_02773 at 2919.613 kb on + strand, within ECD_02773 at 2919.614 kb on - strand, within ECD_02773 at 2919.673 kb on - strand, within ECD_02773 at 2919.777 kb on - strand, within ECD_02773 at 2919.920 kb on + strand, within ECD_02773 at 2919.920 kb on + strand, within ECD_02773 at 2919.920 kb on + strand, within ECD_02773 at 2919.921 kb on - strand, within ECD_02773 at 2919.955 kb on + strand, within ECD_02773 at 2919.955 kb on + strand, within ECD_02773 at 2919.956 kb on - strand, within ECD_02773 at 2919.956 kb on - strand, within ECD_02773 at 2919.989 kb on - strand, within ECD_02773 at 2919.989 kb on - strand, within ECD_02773 at 2919.990 kb on + strand, within ECD_02773 at 2919.990 kb on + strand, within ECD_02773 at 2919.990 kb on + strand, within ECD_02773 at 2919.991 kb on - strand, within ECD_02773 at 2919.991 kb on - strand, within ECD_02773 at 2919.991 kb on - strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.044 kb on - strand, within ECD_02773 at 2920.089 kb on + strand, within ECD_02773 at 2920.090 kb on - strand, within ECD_02773 at 2920.139 kb on + strand, within ECD_02773 at 2920.140 kb on - strand, within ECD_02773 at 2920.215 kb on + strand, within ECD_02773 at 2920.215 kb on + strand, within ECD_02773 at 2920.402 kb on + strand at 2920.403 kb on - strand at 2920.403 kb on - strand at 2920.403 kb on - strand at 2920.419 kb on - strand at 2920.419 kb on - strand at 2920.479 kb on + strand at 2920.479 kb on + strand at 2920.479 kb on + strand at 2920.479 kb on + strand at 2920.480 kb on - strand at 2920.480 kb on - strand at 2920.480 kb on - strand at 2920.480 kb on - strand at 2920.488 kb on + strand at 2920.489 kb on - strand at 2920.534 kb on + strand at 2920.730 kb on + strand, within ECD_02774 at 2920.731 kb on - strand, within ECD_02774 at 2920.776 kb on - strand, within ECD_02774 at 2921.027 kb on - strand, within ECD_02774 at 2921.031 kb on + strand, within ECD_02774 at 2921.122 kb on - strand at 2921.172 kb on - strand at 2921.199 kb on + strand at 2921.199 kb on + strand at 2921.199 kb on + strand at 2921.200 kb on - strand at 2921.208 kb on + strand at 2921.208 kb on + strand at 2921.209 kb on - strand at 2921.222 kb on + strand at 2921.222 kb on + strand at 2921.223 kb on - strand at 2921.223 kb on - strand at 2921.277 kb on - strand, within ECD_02775 at 2921.354 kb on + strand, within ECD_02775 at 2921.443 kb on + strand, within ECD_02775 at 2921.444 kb on - strand, within ECD_02775 at 2921.525 kb on + strand, within ECD_02775 at 2921.612 kb on + strand, within ECD_02775 at 2921.613 kb on - strand, within ECD_02775 at 2921.617 kb on - strand, within ECD_02775 at 2921.617 kb on - strand, within ECD_02775 at 2921.730 kb on + strand, within ECD_02775 at 2921.730 kb on + strand, within ECD_02775 at 2921.730 kb on + strand, within ECD_02775 at 2921.730 kb on + strand, within ECD_02775 at 2921.730 kb on + strand, within ECD_02775 at 2921.730 kb on + strand, within ECD_02775 at 2921.730 kb on + strand, within ECD_02775 at 2921.731 kb on - strand, within ECD_02775 at 2921.731 kb on - strand, within ECD_02775 at 2921.731 kb on - strand, within ECD_02775 at 2921.731 kb on - strand, within ECD_02775 at 2921.731 kb on - strand, within ECD_02775 at 2921.736 kb on + strand, within ECD_02775 at 2921.736 kb on + strand, within ECD_02775 at 2921.736 kb on + strand, within ECD_02775 at 2921.736 kb on + strand, within ECD_02775 at 2921.736 kb on + strand, within ECD_02775 at 2921.736 kb on + strand, within ECD_02775 at 2921.737 kb on - strand, within ECD_02775 at 2921.737 kb on - strand, within ECD_02775 at 2921.737 kb on - strand, within ECD_02775 at 2921.739 kb on - strand, within ECD_02775 at 2921.739 kb on - strand, within ECD_02775 at 2921.751 kb on + strand, within ECD_02775 at 2921.808 kb on + strand, within ECD_02775 at 2921.870 kb on + strand at 2921.910 kb on + strand at 2921.911 kb on - strand at 2921.911 kb on - strand at 2921.915 kb on + strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.916 kb on - strand at 2921.956 kb on + strand at 2921.957 kb on - strand at 2921.957 kb on - strand at 2921.987 kb on + strand at 2921.991 kb on + strand at 2921.991 kb on + strand at 2921.991 kb on + strand at 2921.992 kb on - strand at 2921.992 kb on - strand at 2921.992 kb on - strand at 2922.010 kb on + strand at 2922.010 kb on + strand at 2922.010 kb on + strand at 2922.010 kb on + strand at 2922.010 kb on + strand at 2922.011 kb on - strand at 2922.084 kb on - strand, within ECD_02776 at 2922.084 kb on - strand, within ECD_02776
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,919,613 + ECD_02773 0.34 -0.0 2,919,613 + ECD_02773 0.34 -0.3 2,919,614 - ECD_02773 0.34 +0.1 2,919,673 - ECD_02773 0.38 +0.4 2,919,777 - ECD_02773 0.46 -0.2 2,919,920 + ECD_02773 0.56 +0.0 2,919,920 + ECD_02773 0.56 +0.5 2,919,920 + ECD_02773 0.56 +0.2 2,919,921 - ECD_02773 0.56 -1.1 2,919,955 + ECD_02773 0.58 -0.9 2,919,955 + ECD_02773 0.58 +0.6 2,919,956 - ECD_02773 0.58 +0.8 2,919,956 - ECD_02773 0.58 -0.2 2,919,989 - ECD_02773 0.61 +0.1 2,919,989 - ECD_02773 0.61 +0.9 2,919,990 + ECD_02773 0.61 +0.5 2,919,990 + ECD_02773 0.61 +0.4 2,919,990 + ECD_02773 0.61 +0.3 2,919,991 - ECD_02773 0.61 -0.1 2,919,991 - ECD_02773 0.61 -0.6 2,919,991 - ECD_02773 0.61 -1.4 2,920,043 + ECD_02773 0.65 +0.3 2,920,043 + ECD_02773 0.65 +0.6 2,920,043 + ECD_02773 0.65 +0.6 2,920,043 + ECD_02773 0.65 -0.4 2,920,043 + ECD_02773 0.65 +0.3 2,920,044 - ECD_02773 0.65 +0.2 2,920,089 + ECD_02773 0.68 +0.5 2,920,090 - ECD_02773 0.68 +0.2 2,920,139 + ECD_02773 0.71 -0.1 2,920,140 - ECD_02773 0.72 -0.2 2,920,215 + ECD_02773 0.77 +0.3 2,920,215 + ECD_02773 0.77 +0.7 2,920,402 + +0.6 2,920,403 - -0.3 2,920,403 - +0.2 2,920,403 - +1.3 2,920,419 - +0.6 2,920,419 - +0.1 2,920,479 + +0.4 2,920,479 + +0.4 2,920,479 + +0.5 2,920,479 + +0.2 2,920,480 - -0.1 2,920,480 - -2.0 2,920,480 - -0.0 2,920,480 - -0.6 2,920,488 + +0.6 2,920,489 - -0.3 2,920,534 + +1.5 2,920,730 + ECD_02774 0.23 +0.7 2,920,731 - ECD_02774 0.24 +0.5 2,920,776 - ECD_02774 0.33 +1.1 2,921,027 - ECD_02774 0.83 +0.3 2,921,031 + ECD_02774 0.84 +1.4 2,921,122 - +0.8 2,921,172 - +0.1 2,921,199 + -0.4 2,921,199 + +0.4 2,921,199 + -0.5 2,921,200 - +0.3 2,921,208 + -0.4 2,921,208 + -0.9 2,921,209 - +0.8 2,921,222 + +1.0 2,921,222 + +0.7 2,921,223 - -0.2 2,921,223 - +0.4 2,921,277 - ECD_02775 0.10 -0.4 2,921,354 + ECD_02775 0.21 +0.7 2,921,443 + ECD_02775 0.34 +0.2 2,921,444 - ECD_02775 0.34 -0.5 2,921,525 + ECD_02775 0.45 +0.8 2,921,612 + ECD_02775 0.57 +1.0 2,921,613 - ECD_02775 0.58 +0.2 2,921,617 - ECD_02775 0.58 +0.3 2,921,617 - ECD_02775 0.58 +0.6 2,921,730 + ECD_02775 0.74 +0.9 2,921,730 + ECD_02775 0.74 +0.5 2,921,730 + ECD_02775 0.74 +0.8 2,921,730 + ECD_02775 0.74 +0.8 2,921,730 + ECD_02775 0.74 -0.2 2,921,730 + ECD_02775 0.74 -0.2 2,921,730 + ECD_02775 0.74 -0.2 2,921,731 - ECD_02775 0.74 +1.0 2,921,731 - ECD_02775 0.74 -0.9 2,921,731 - ECD_02775 0.74 +1.6 2,921,731 - ECD_02775 0.74 +0.9 2,921,731 - ECD_02775 0.74 +0.5 2,921,736 + ECD_02775 0.75 -0.1 2,921,736 + ECD_02775 0.75 +0.4 2,921,736 + ECD_02775 0.75 -0.0 2,921,736 + ECD_02775 0.75 -1.7 2,921,736 + ECD_02775 0.75 -0.5 2,921,736 + ECD_02775 0.75 +0.0 2,921,737 - ECD_02775 0.75 -0.4 2,921,737 - ECD_02775 0.75 -0.1 2,921,737 - ECD_02775 0.75 +2.8 2,921,739 - ECD_02775 0.75 -1.1 2,921,739 - ECD_02775 0.75 +0.6 2,921,751 + ECD_02775 0.77 +1.6 2,921,808 + ECD_02775 0.85 -1.2 2,921,870 + +0.2 2,921,910 + -0.2 2,921,911 - -0.2 2,921,911 - +0.0 2,921,915 + +0.1 2,921,916 - +0.2 2,921,916 - +0.3 2,921,916 - +0.1 2,921,916 - -0.0 2,921,916 - -0.6 2,921,916 - +0.1 2,921,916 - +0.1 2,921,916 - -2.9 2,921,916 - -1.8 2,921,956 + +0.4 2,921,957 - +0.8 2,921,957 - +0.2 2,921,987 + -0.1 2,921,991 + +0.4 2,921,991 + +1.2 2,921,991 + -1.2 2,921,992 - -0.5 2,921,992 - -0.2 2,921,992 - +0.7 2,922,010 + -0.1 2,922,010 + +0.2 2,922,010 + +0.2 2,922,010 + -1.1 2,922,010 + -1.7 2,922,011 - -0.2 2,922,084 - ECD_02776 0.13 -0.4 2,922,084 - ECD_02776 0.13 +0.2
Or see this region's nucleotide sequence