Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02711 and ECD_02712 are separated by 2 nucleotides ECD_02712 and ECD_02713 are separated by 50 nucleotides ECD_02713 and ECD_02714 overlap by 4 nucleotides
ECD_02711: ECD_02711 - putative Fe-S subunit oxidoreductase subunit, at 2,846,921 to 2,850,019
_02711
ECD_02712: ECD_02712 - putative chlorohydrolase/aminohydrolase, at 2,850,022 to 2,851,350
_02712
ECD_02713: ECD_02713 - putative oxidoreductase, at 2,851,401 to 2,852,180
_02713
ECD_02714: ECD_02714 - putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding, at 2,852,177 to 2,855,047
_02714
Position (kb)
2850
2851
2852 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2849.028 kb on + strand, within ECD_02711 at 2849.028 kb on + strand, within ECD_02711 at 2849.028 kb on + strand, within ECD_02711 at 2849.049 kb on - strand, within ECD_02711 at 2849.062 kb on - strand, within ECD_02711 at 2849.090 kb on + strand, within ECD_02711 at 2849.090 kb on + strand, within ECD_02711 at 2849.090 kb on + strand, within ECD_02711 at 2849.091 kb on - strand, within ECD_02711 at 2849.115 kb on + strand, within ECD_02711 at 2849.116 kb on - strand, within ECD_02711 at 2849.134 kb on + strand, within ECD_02711 at 2849.167 kb on - strand, within ECD_02711 at 2849.179 kb on + strand, within ECD_02711 at 2849.179 kb on + strand, within ECD_02711 at 2849.179 kb on + strand, within ECD_02711 at 2849.180 kb on - strand, within ECD_02711 at 2849.180 kb on - strand, within ECD_02711 at 2849.253 kb on + strand, within ECD_02711 at 2849.253 kb on + strand, within ECD_02711 at 2849.383 kb on + strand, within ECD_02711 at 2849.383 kb on + strand, within ECD_02711 at 2849.383 kb on + strand, within ECD_02711 at 2849.384 kb on - strand, within ECD_02711 at 2849.397 kb on + strand, within ECD_02711 at 2849.398 kb on - strand, within ECD_02711 at 2849.398 kb on - strand, within ECD_02711 at 2849.398 kb on - strand, within ECD_02711 at 2849.464 kb on + strand, within ECD_02711 at 2849.465 kb on - strand, within ECD_02711 at 2849.497 kb on + strand, within ECD_02711 at 2849.497 kb on + strand, within ECD_02711 at 2849.497 kb on + strand, within ECD_02711 at 2849.497 kb on + strand, within ECD_02711 at 2849.497 kb on + strand, within ECD_02711 at 2849.498 kb on - strand, within ECD_02711 at 2849.498 kb on - strand, within ECD_02711 at 2849.498 kb on - strand, within ECD_02711 at 2849.498 kb on - strand, within ECD_02711 at 2849.532 kb on - strand, within ECD_02711 at 2849.532 kb on - strand, within ECD_02711 at 2849.540 kb on - strand, within ECD_02711 at 2849.549 kb on - strand, within ECD_02711 at 2849.554 kb on + strand, within ECD_02711 at 2849.623 kb on + strand, within ECD_02711 at 2849.623 kb on + strand, within ECD_02711 at 2849.623 kb on + strand, within ECD_02711 at 2849.623 kb on + strand, within ECD_02711 at 2849.623 kb on + strand, within ECD_02711 at 2849.624 kb on - strand, within ECD_02711 at 2849.627 kb on + strand, within ECD_02711 at 2849.627 kb on + strand, within ECD_02711 at 2849.628 kb on - strand, within ECD_02711 at 2849.628 kb on - strand, within ECD_02711 at 2849.628 kb on - strand, within ECD_02711 at 2849.628 kb on - strand, within ECD_02711 at 2849.628 kb on - strand, within ECD_02711 at 2849.729 kb on + strand at 2849.729 kb on + strand at 2849.730 kb on - strand at 2849.730 kb on - strand at 2849.730 kb on - strand at 2849.730 kb on - strand at 2849.777 kb on - strand at 2849.783 kb on + strand at 2849.783 kb on + strand at 2849.783 kb on + strand at 2849.784 kb on - strand at 2849.828 kb on - strand at 2849.828 kb on - strand at 2849.885 kb on - strand at 2849.901 kb on + strand at 2849.902 kb on - strand at 2849.927 kb on - strand at 2849.927 kb on - strand at 2849.934 kb on + strand at 2849.934 kb on + strand at 2849.934 kb on + strand at 2849.935 kb on - strand at 2849.935 kb on - strand at 2849.953 kb on + strand at 2849.953 kb on + strand at 2849.954 kb on - strand at 2849.954 kb on - strand at 2849.954 kb on - strand at 2849.954 kb on - strand at 2849.954 kb on - strand at 2849.993 kb on + strand at 2849.993 kb on + strand at 2849.994 kb on - strand at 2850.017 kb on + strand at 2850.017 kb on + strand at 2850.017 kb on + strand at 2850.017 kb on + strand at 2850.017 kb on + strand at 2850.017 kb on + strand at 2850.017 kb on + strand at 2850.018 kb on - strand at 2850.057 kb on - strand at 2850.057 kb on - strand at 2850.087 kb on + strand at 2850.088 kb on - strand at 2850.240 kb on + strand, within ECD_02712 at 2850.334 kb on + strand, within ECD_02712 at 2850.334 kb on + strand, within ECD_02712 at 2850.367 kb on - strand, within ECD_02712 at 2850.378 kb on + strand, within ECD_02712 at 2850.378 kb on + strand, within ECD_02712 at 2850.378 kb on + strand, within ECD_02712 at 2850.378 kb on + strand, within ECD_02712 at 2850.379 kb on - strand, within ECD_02712 at 2850.379 kb on - strand, within ECD_02712 at 2850.412 kb on + strand, within ECD_02712 at 2850.413 kb on - strand, within ECD_02712 at 2850.413 kb on - strand, within ECD_02712 at 2850.413 kb on - strand, within ECD_02712 at 2850.415 kb on - strand, within ECD_02712 at 2850.531 kb on - strand, within ECD_02712 at 2850.592 kb on + strand, within ECD_02712 at 2850.592 kb on + strand, within ECD_02712 at 2850.609 kb on + strand, within ECD_02712 at 2850.609 kb on + strand, within ECD_02712 at 2850.609 kb on + strand, within ECD_02712 at 2850.609 kb on + strand, within ECD_02712 at 2850.610 kb on - strand, within ECD_02712 at 2850.696 kb on + strand, within ECD_02712 at 2850.696 kb on + strand, within ECD_02712 at 2850.697 kb on - strand, within ECD_02712 at 2850.697 kb on - strand, within ECD_02712 at 2850.697 kb on - strand, within ECD_02712 at 2850.719 kb on - strand, within ECD_02712 at 2850.731 kb on - strand, within ECD_02712 at 2850.731 kb on - strand, within ECD_02712 at 2850.820 kb on + strand, within ECD_02712 at 2850.820 kb on + strand, within ECD_02712 at 2850.820 kb on + strand, within ECD_02712 at 2850.820 kb on + strand, within ECD_02712 at 2850.820 kb on + strand, within ECD_02712 at 2850.821 kb on - strand, within ECD_02712 at 2850.821 kb on - strand, within ECD_02712 at 2850.821 kb on - strand, within ECD_02712 at 2850.821 kb on - strand, within ECD_02712 at 2850.821 kb on - strand, within ECD_02712 at 2850.821 kb on - strand, within ECD_02712 at 2850.876 kb on + strand, within ECD_02712 at 2850.910 kb on + strand, within ECD_02712 at 2850.910 kb on + strand, within ECD_02712 at 2850.911 kb on - strand, within ECD_02712 at 2850.911 kb on - strand, within ECD_02712 at 2851.066 kb on - strand, within ECD_02712 at 2851.120 kb on + strand, within ECD_02712 at 2851.121 kb on - strand, within ECD_02712 at 2851.133 kb on + strand, within ECD_02712 at 2851.147 kb on + strand, within ECD_02712 at 2851.191 kb on + strand, within ECD_02712 at 2851.252 kb on + strand at 2851.252 kb on + strand at 2851.252 kb on + strand at 2851.253 kb on - strand at 2851.253 kb on - strand at 2851.253 kb on - strand at 2851.253 kb on - strand at 2851.269 kb on + strand at 2851.270 kb on - strand at 2851.291 kb on + strand at 2851.291 kb on + strand at 2851.320 kb on + strand at 2851.320 kb on + strand at 2851.321 kb on - strand at 2851.348 kb on + strand at 2851.385 kb on + strand at 2851.386 kb on - strand at 2851.389 kb on + strand at 2851.389 kb on + strand at 2851.389 kb on + strand at 2851.390 kb on - strand at 2851.390 kb on - strand at 2851.508 kb on + strand, within ECD_02713 at 2851.509 kb on - strand, within ECD_02713 at 2851.509 kb on - strand, within ECD_02713 at 2851.546 kb on + strand, within ECD_02713 at 2851.695 kb on - strand, within ECD_02713 at 2851.819 kb on - strand, within ECD_02713 at 2851.819 kb on - strand, within ECD_02713 at 2851.819 kb on - strand, within ECD_02713 at 2851.961 kb on + strand, within ECD_02713 at 2852.103 kb on + strand at 2852.103 kb on + strand at 2852.106 kb on - strand at 2852.112 kb on + strand at 2852.112 kb on + strand at 2852.112 kb on + strand at 2852.112 kb on + strand at 2852.112 kb on + strand at 2852.112 kb on + strand at 2852.114 kb on + strand at 2852.114 kb on + strand at 2852.114 kb on + strand at 2852.115 kb on - strand at 2852.176 kb on + strand at 2852.177 kb on - strand at 2852.191 kb on + strand at 2852.191 kb on + strand at 2852.192 kb on - strand at 2852.323 kb on - strand at 2852.335 kb on + strand at 2852.336 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,849,028 + ECD_02711 0.68 +0.2 2,849,028 + ECD_02711 0.68 +0.0 2,849,028 + ECD_02711 0.68 -1.1 2,849,049 - ECD_02711 0.69 +0.2 2,849,062 - ECD_02711 0.69 +1.2 2,849,090 + ECD_02711 0.70 +0.5 2,849,090 + ECD_02711 0.70 +0.2 2,849,090 + ECD_02711 0.70 -0.4 2,849,091 - ECD_02711 0.70 +0.5 2,849,115 + ECD_02711 0.71 +0.5 2,849,116 - ECD_02711 0.71 +0.0 2,849,134 + ECD_02711 0.71 +0.5 2,849,167 - ECD_02711 0.72 -0.8 2,849,179 + ECD_02711 0.73 -0.4 2,849,179 + ECD_02711 0.73 +0.2 2,849,179 + ECD_02711 0.73 +0.7 2,849,180 - ECD_02711 0.73 +0.7 2,849,180 - ECD_02711 0.73 -1.2 2,849,253 + ECD_02711 0.75 -0.3 2,849,253 + ECD_02711 0.75 -0.2 2,849,383 + ECD_02711 0.79 +0.0 2,849,383 + ECD_02711 0.79 -0.2 2,849,383 + ECD_02711 0.79 -0.4 2,849,384 - ECD_02711 0.79 -0.8 2,849,397 + ECD_02711 0.80 -0.0 2,849,398 - ECD_02711 0.80 +0.8 2,849,398 - ECD_02711 0.80 +0.3 2,849,398 - ECD_02711 0.80 +0.5 2,849,464 + ECD_02711 0.82 +0.3 2,849,465 - ECD_02711 0.82 +1.0 2,849,497 + ECD_02711 0.83 -1.5 2,849,497 + ECD_02711 0.83 +0.1 2,849,497 + ECD_02711 0.83 +0.7 2,849,497 + ECD_02711 0.83 -0.5 2,849,497 + ECD_02711 0.83 -0.4 2,849,498 - ECD_02711 0.83 -2.1 2,849,498 - ECD_02711 0.83 -0.3 2,849,498 - ECD_02711 0.83 -0.4 2,849,498 - ECD_02711 0.83 +0.1 2,849,532 - ECD_02711 0.84 +0.6 2,849,532 - ECD_02711 0.84 -0.7 2,849,540 - ECD_02711 0.85 -0.1 2,849,549 - ECD_02711 0.85 +0.9 2,849,554 + ECD_02711 0.85 +0.5 2,849,623 + ECD_02711 0.87 -0.4 2,849,623 + ECD_02711 0.87 +0.1 2,849,623 + ECD_02711 0.87 +0.1 2,849,623 + ECD_02711 0.87 -0.3 2,849,623 + ECD_02711 0.87 -0.4 2,849,624 - ECD_02711 0.87 -0.1 2,849,627 + ECD_02711 0.87 +0.2 2,849,627 + ECD_02711 0.87 +0.7 2,849,628 - ECD_02711 0.87 +0.0 2,849,628 - ECD_02711 0.87 -0.7 2,849,628 - ECD_02711 0.87 +1.7 2,849,628 - ECD_02711 0.87 +0.2 2,849,628 - ECD_02711 0.87 +0.3 2,849,729 + -1.1 2,849,729 + -0.1 2,849,730 - +0.9 2,849,730 - -0.8 2,849,730 - +1.7 2,849,730 - +2.5 2,849,777 - -0.3 2,849,783 + -0.0 2,849,783 + +0.8 2,849,783 + +0.6 2,849,784 - -0.4 2,849,828 - +0.5 2,849,828 - -2.1 2,849,885 - +0.0 2,849,901 + -0.6 2,849,902 - +0.4 2,849,927 - -0.5 2,849,927 - +0.4 2,849,934 + +0.4 2,849,934 + +1.2 2,849,934 + -0.4 2,849,935 - +0.6 2,849,935 - -0.6 2,849,953 + -0.1 2,849,953 + -0.1 2,849,954 - -0.8 2,849,954 - -0.2 2,849,954 - +0.2 2,849,954 - -2.3 2,849,954 - -0.4 2,849,993 + +0.0 2,849,993 + +0.7 2,849,994 - +0.5 2,850,017 + -0.2 2,850,017 + +0.5 2,850,017 + +0.5 2,850,017 + -0.6 2,850,017 + +0.1 2,850,017 + +0.2 2,850,017 + -0.2 2,850,018 - +0.6 2,850,057 - -0.9 2,850,057 - +0.4 2,850,087 + +0.5 2,850,088 - +0.5 2,850,240 + ECD_02712 0.16 -0.3 2,850,334 + ECD_02712 0.23 +0.4 2,850,334 + ECD_02712 0.23 +1.3 2,850,367 - ECD_02712 0.26 +0.5 2,850,378 + ECD_02712 0.27 +0.5 2,850,378 + ECD_02712 0.27 +0.7 2,850,378 + ECD_02712 0.27 +1.2 2,850,378 + ECD_02712 0.27 -0.3 2,850,379 - ECD_02712 0.27 -0.1 2,850,379 - ECD_02712 0.27 +0.4 2,850,412 + ECD_02712 0.29 +0.4 2,850,413 - ECD_02712 0.29 +0.2 2,850,413 - ECD_02712 0.29 +1.3 2,850,413 - ECD_02712 0.29 +0.2 2,850,415 - ECD_02712 0.30 -0.9 2,850,531 - ECD_02712 0.38 +0.1 2,850,592 + ECD_02712 0.43 +0.6 2,850,592 + ECD_02712 0.43 +0.5 2,850,609 + ECD_02712 0.44 -0.8 2,850,609 + ECD_02712 0.44 -0.2 2,850,609 + ECD_02712 0.44 -0.4 2,850,609 + ECD_02712 0.44 +0.7 2,850,610 - ECD_02712 0.44 +0.1 2,850,696 + ECD_02712 0.51 +0.7 2,850,696 + ECD_02712 0.51 +0.0 2,850,697 - ECD_02712 0.51 -1.2 2,850,697 - ECD_02712 0.51 +1.5 2,850,697 - ECD_02712 0.51 +0.3 2,850,719 - ECD_02712 0.52 -0.0 2,850,731 - ECD_02712 0.53 +1.0 2,850,731 - ECD_02712 0.53 +0.3 2,850,820 + ECD_02712 0.60 +0.3 2,850,820 + ECD_02712 0.60 +0.2 2,850,820 + ECD_02712 0.60 +0.6 2,850,820 + ECD_02712 0.60 -0.2 2,850,820 + ECD_02712 0.60 +0.2 2,850,821 - ECD_02712 0.60 -2.3 2,850,821 - ECD_02712 0.60 +0.3 2,850,821 - ECD_02712 0.60 -1.6 2,850,821 - ECD_02712 0.60 +0.3 2,850,821 - ECD_02712 0.60 -0.0 2,850,821 - ECD_02712 0.60 +0.2 2,850,876 + ECD_02712 0.64 +0.3 2,850,910 + ECD_02712 0.67 +0.1 2,850,910 + ECD_02712 0.67 +0.0 2,850,911 - ECD_02712 0.67 -0.4 2,850,911 - ECD_02712 0.67 -0.6 2,851,066 - ECD_02712 0.79 +0.5 2,851,120 + ECD_02712 0.83 +0.7 2,851,121 - ECD_02712 0.83 +1.2 2,851,133 + ECD_02712 0.84 -0.5 2,851,147 + ECD_02712 0.85 -0.3 2,851,191 + ECD_02712 0.88 +0.3 2,851,252 + -0.1 2,851,252 + -0.0 2,851,252 + -0.1 2,851,253 - -0.5 2,851,253 - +0.1 2,851,253 - -0.4 2,851,253 - -0.2 2,851,269 + +0.1 2,851,270 - +0.5 2,851,291 + +0.3 2,851,291 + -0.1 2,851,320 + -1.0 2,851,320 + -0.2 2,851,321 - +0.2 2,851,348 + -1.0 2,851,385 + -0.1 2,851,386 - +0.1 2,851,389 + +0.6 2,851,389 + -0.1 2,851,389 + -1.2 2,851,390 - -0.6 2,851,390 - -0.1 2,851,508 + ECD_02713 0.14 +1.5 2,851,509 - ECD_02713 0.14 +0.1 2,851,509 - ECD_02713 0.14 +0.0 2,851,546 + ECD_02713 0.19 +1.0 2,851,695 - ECD_02713 0.38 +1.0 2,851,819 - ECD_02713 0.54 +0.4 2,851,819 - ECD_02713 0.54 +1.5 2,851,819 - ECD_02713 0.54 +0.1 2,851,961 + ECD_02713 0.72 +0.4 2,852,103 + -0.5 2,852,103 + -0.7 2,852,106 - +1.2 2,852,112 + +1.2 2,852,112 + +0.6 2,852,112 + -0.6 2,852,112 + +0.9 2,852,112 + -0.6 2,852,112 + -0.4 2,852,114 + +0.5 2,852,114 + -0.8 2,852,114 + -0.7 2,852,115 - +0.1 2,852,176 + -0.1 2,852,177 - +0.7 2,852,191 + -1.0 2,852,191 + +0.5 2,852,192 - +0.8 2,852,323 - +0.3 2,852,335 + +0.3 2,852,336 - +1.0
Or see this region's nucleotide sequence