Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02435 and ECD_02436 are separated by 47 nucleotides ECD_02436 and ECD_02437 are separated by 11 nucleotides ECD_02437 and ECD_02438 are separated by 65 nucleotides
ECD_02435: ECD_02435 - DoxX family inner membrane protein, at 2,539,151 to 2,539,573
_02435
ECD_02436: ECD_02436 - mutarotase superfamily protein, YphB family, at 2,539,621 to 2,540,493
_02436
ECD_02437: ECD_02437 - putative Zn-dependent NAD(P)-binding oxidoreductase, at 2,540,505 to 2,541,566
_02437
ECD_02438: ECD_02438 - putative sugar ABC transporter permease, at 2,541,632 to 2,542,630
_02438
Position (kb)
2540
2541
2542 Strain fitness (log2 ratio)
-2
-1
0
1 at 2539.537 kb on + strand at 2540.180 kb on + strand, within ECD_02436 at 2540.181 kb on - strand, within ECD_02436 at 2540.197 kb on - strand, within ECD_02436 at 2540.197 kb on - strand, within ECD_02436 at 2540.197 kb on - strand, within ECD_02436 at 2540.248 kb on + strand, within ECD_02436 at 2540.248 kb on + strand, within ECD_02436 at 2540.252 kb on + strand, within ECD_02436 at 2540.253 kb on - strand, within ECD_02436 at 2540.482 kb on - strand at 2540.483 kb on + strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.520 kb on - strand at 2540.520 kb on - strand at 2540.752 kb on + strand, within ECD_02437 at 2540.753 kb on - strand, within ECD_02437 at 2540.949 kb on - strand, within ECD_02437 at 2541.076 kb on + strand, within ECD_02437 at 2541.076 kb on + strand, within ECD_02437 at 2541.225 kb on - strand, within ECD_02437 at 2541.225 kb on - strand, within ECD_02437 at 2541.234 kb on - strand, within ECD_02437 at 2541.234 kb on - strand, within ECD_02437 at 2541.369 kb on - strand, within ECD_02437 at 2541.425 kb on - strand, within ECD_02437 at 2541.425 kb on - strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.430 kb on + strand, within ECD_02437 at 2541.431 kb on - strand, within ECD_02437 at 2541.431 kb on - strand, within ECD_02437 at 2541.478 kb on - strand at 2541.544 kb on + strand at 2541.585 kb on - strand at 2541.708 kb on - strand at 2541.730 kb on + strand at 2541.731 kb on - strand at 2541.767 kb on - strand, within ECD_02438 at 2542.238 kb on + strand, within ECD_02438 at 2542.408 kb on + strand, within ECD_02438 at 2542.559 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,539,537 + +1.0 2,540,180 + ECD_02436 0.64 -0.8 2,540,181 - ECD_02436 0.64 -0.2 2,540,197 - ECD_02436 0.66 +0.3 2,540,197 - ECD_02436 0.66 -0.0 2,540,197 - ECD_02436 0.66 -0.1 2,540,248 + ECD_02436 0.72 +1.4 2,540,248 + ECD_02436 0.72 -0.0 2,540,252 + ECD_02436 0.72 -0.6 2,540,253 - ECD_02436 0.72 +0.2 2,540,482 - -0.1 2,540,483 + -0.6 2,540,484 - -0.2 2,540,484 - +0.2 2,540,484 - -1.5 2,540,484 - +0.7 2,540,484 - -1.4 2,540,484 - -0.0 2,540,484 - +0.3 2,540,520 - -2.0 2,540,520 - -0.7 2,540,752 + ECD_02437 0.23 +0.8 2,540,753 - ECD_02437 0.23 +0.5 2,540,949 - ECD_02437 0.42 +0.5 2,541,076 + ECD_02437 0.54 -1.2 2,541,076 + ECD_02437 0.54 -0.4 2,541,225 - ECD_02437 0.68 +0.1 2,541,225 - ECD_02437 0.68 +0.6 2,541,234 - ECD_02437 0.69 -0.5 2,541,234 - ECD_02437 0.69 +0.3 2,541,369 - ECD_02437 0.81 -0.8 2,541,425 - ECD_02437 0.87 +0.3 2,541,425 - ECD_02437 0.87 +0.0 2,541,428 + ECD_02437 0.87 -0.7 2,541,428 + ECD_02437 0.87 -0.1 2,541,428 + ECD_02437 0.87 -0.3 2,541,428 + ECD_02437 0.87 -0.1 2,541,428 + ECD_02437 0.87 -0.5 2,541,429 - ECD_02437 0.87 +0.5 2,541,429 - ECD_02437 0.87 +0.2 2,541,429 - ECD_02437 0.87 +1.7 2,541,429 - ECD_02437 0.87 +0.0 2,541,429 - ECD_02437 0.87 -0.7 2,541,429 - ECD_02437 0.87 -2.1 2,541,429 - ECD_02437 0.87 +0.8 2,541,429 - ECD_02437 0.87 +0.9 2,541,430 + ECD_02437 0.87 +0.3 2,541,431 - ECD_02437 0.87 -1.2 2,541,431 - ECD_02437 0.87 +0.3 2,541,478 - +0.5 2,541,544 + -0.0 2,541,585 - +0.1 2,541,708 - +0.6 2,541,730 + -0.2 2,541,731 - +0.8 2,541,767 - ECD_02438 0.14 +0.2 2,542,238 + ECD_02438 0.61 +0.0 2,542,408 + ECD_02438 0.78 +0.2 2,542,559 - -0.7
Or see this region's nucleotide sequence