Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02294 and ECD_02295 overlap by 1 nucleotides ECD_02295 and ECD_02296 are separated by 14 nucleotides
ECD_02294: ECD_02294 - aminopeptidase, at 2,382,396 to 2,383,433
_02294
ECD_02295: ECD_02295 - Xaa-Pro aminopeptidase, at 2,383,433 to 2,384,518
_02295
ECD_02296: ECD_02296 - putative enzyme IIC component of PTS, at 2,384,533 to 2,385,780
_02296
Position (kb)
2383
2384
2385 Strain fitness (log2 ratio)
-1
0
1 at 2382.605 kb on + strand, within ECD_02294 at 2382.606 kb on - strand, within ECD_02294 at 2382.606 kb on - strand, within ECD_02294 at 2382.606 kb on - strand, within ECD_02294 at 2383.040 kb on - strand, within ECD_02294 at 2383.174 kb on - strand, within ECD_02294 at 2383.174 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.417 kb on - strand at 2383.417 kb on - strand at 2383.425 kb on + strand at 2383.655 kb on - strand, within ECD_02295 at 2383.861 kb on - strand, within ECD_02295 at 2384.071 kb on + strand, within ECD_02295 at 2384.323 kb on - strand, within ECD_02295 at 2384.353 kb on - strand, within ECD_02295 at 2384.353 kb on - strand, within ECD_02295 at 2384.353 kb on - strand, within ECD_02295 at 2384.485 kb on + strand at 2384.606 kb on - strand at 2384.636 kb on + strand at 2384.637 kb on - strand at 2384.748 kb on - strand, within ECD_02296 at 2384.748 kb on - strand, within ECD_02296 at 2384.925 kb on + strand, within ECD_02296 at 2384.959 kb on + strand, within ECD_02296 at 2385.057 kb on - strand, within ECD_02296 at 2385.096 kb on + strand, within ECD_02296 at 2385.097 kb on - strand, within ECD_02296 at 2385.141 kb on - strand, within ECD_02296 at 2385.141 kb on - strand, within ECD_02296 at 2385.143 kb on + strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.144 kb on - strand, within ECD_02296 at 2385.273 kb on + strand, within ECD_02296 at 2385.274 kb on - strand, within ECD_02296 at 2385.327 kb on + strand, within ECD_02296 at 2385.505 kb on + strand, within ECD_02296
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,382,605 + ECD_02294 0.20 +0.7 2,382,606 - ECD_02294 0.20 +1.0 2,382,606 - ECD_02294 0.20 +1.3 2,382,606 - ECD_02294 0.20 +0.5 2,383,040 - ECD_02294 0.62 -0.6 2,383,174 - ECD_02294 0.75 +1.3 2,383,174 - ECD_02294 0.75 +0.4 2,383,230 - ECD_02294 0.80 -1.0 2,383,230 - ECD_02294 0.80 -0.0 2,383,230 - ECD_02294 0.80 -1.0 2,383,230 - ECD_02294 0.80 +0.1 2,383,417 - -0.5 2,383,417 - +0.0 2,383,425 + +0.1 2,383,655 - ECD_02295 0.20 -1.0 2,383,861 - ECD_02295 0.39 -1.5 2,384,071 + ECD_02295 0.59 -0.1 2,384,323 - ECD_02295 0.82 +0.3 2,384,353 - ECD_02295 0.85 -0.1 2,384,353 - ECD_02295 0.85 -0.2 2,384,353 - ECD_02295 0.85 -0.2 2,384,485 + +0.2 2,384,606 - -0.0 2,384,636 + -0.4 2,384,637 - +1.0 2,384,748 - ECD_02296 0.17 -0.3 2,384,748 - ECD_02296 0.17 +0.8 2,384,925 + ECD_02296 0.31 +0.3 2,384,959 + ECD_02296 0.34 +0.1 2,385,057 - ECD_02296 0.42 -0.2 2,385,096 + ECD_02296 0.45 -1.2 2,385,097 - ECD_02296 0.45 +0.3 2,385,141 - ECD_02296 0.49 +0.5 2,385,141 - ECD_02296 0.49 +0.9 2,385,143 + ECD_02296 0.49 +0.8 2,385,144 - ECD_02296 0.49 -0.0 2,385,144 - ECD_02296 0.49 +0.3 2,385,144 - ECD_02296 0.49 +0.3 2,385,144 - ECD_02296 0.49 +1.4 2,385,273 + ECD_02296 0.59 -0.1 2,385,274 - ECD_02296 0.59 +0.3 2,385,327 + ECD_02296 0.64 +0.1 2,385,505 + ECD_02296 0.78 +1.3
Or see this region's nucleotide sequence