Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02192 and ECD_02193 are separated by 78 nucleotides ECD_02193 and ECD_02194 are separated by 54 nucleotides ECD_02194 and ECD_02195 are separated by 64 nucleotides
ECD_02192: ECD_02192 - isochorismate synthase 2, at 2,269,522 to 2,270,817
_02192
ECD_02193: ECD_02193 - putative membrane-anchored DUF883 family ribosome-binding protein, at 2,270,896 to 2,271,201
_02193
ECD_02194: ECD_02194 - GNAT family putative N-acetyltransferase, at 2,271,256 to 2,271,717
_02194
ECD_02195: ECD_02195 - RNase BN, tRNA processing enzyme, at 2,271,782 to 2,272,699
_02195
Position (kb)
2270
2271
2272 Strain fitness (log2 ratio)
-2
-1
0
1 at 2269.931 kb on - strand, within ECD_02192 at 2270.006 kb on - strand, within ECD_02192 at 2270.035 kb on - strand, within ECD_02192 at 2270.498 kb on - strand, within ECD_02192 at 2270.644 kb on - strand, within ECD_02192 at 2270.806 kb on - strand at 2270.921 kb on - strand at 2270.979 kb on - strand, within ECD_02193 at 2270.979 kb on - strand, within ECD_02193 at 2271.015 kb on - strand, within ECD_02193 at 2271.018 kb on - strand, within ECD_02193 at 2271.018 kb on - strand, within ECD_02193 at 2271.018 kb on - strand, within ECD_02193 at 2271.018 kb on - strand, within ECD_02193 at 2271.018 kb on - strand, within ECD_02193 at 2271.095 kb on + strand, within ECD_02193 at 2271.180 kb on + strand at 2271.234 kb on - strand at 2271.237 kb on + strand at 2271.238 kb on - strand at 2271.238 kb on - strand at 2271.311 kb on + strand, within ECD_02194 at 2271.347 kb on + strand, within ECD_02194 at 2271.409 kb on - strand, within ECD_02194 at 2271.666 kb on - strand, within ECD_02194 at 2271.718 kb on - strand at 2271.737 kb on + strand at 2271.737 kb on + strand at 2271.738 kb on - strand at 2271.738 kb on - strand at 2271.738 kb on - strand at 2271.745 kb on - strand at 2272.025 kb on - strand, within ECD_02195
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,269,931 - ECD_02192 0.32 -0.5 2,270,006 - ECD_02192 0.37 +0.2 2,270,035 - ECD_02192 0.40 +0.2 2,270,498 - ECD_02192 0.75 +0.5 2,270,644 - ECD_02192 0.87 -1.3 2,270,806 - +0.4 2,270,921 - -0.2 2,270,979 - ECD_02193 0.27 +0.4 2,270,979 - ECD_02193 0.27 +0.4 2,271,015 - ECD_02193 0.39 -0.2 2,271,018 - ECD_02193 0.40 +0.5 2,271,018 - ECD_02193 0.40 -0.3 2,271,018 - ECD_02193 0.40 +0.8 2,271,018 - ECD_02193 0.40 +0.3 2,271,018 - ECD_02193 0.40 -0.2 2,271,095 + ECD_02193 0.65 +0.2 2,271,180 + +0.4 2,271,234 - +1.2 2,271,237 + -0.6 2,271,238 - +0.4 2,271,238 - -0.8 2,271,311 + ECD_02194 0.12 -2.1 2,271,347 + ECD_02194 0.20 -1.3 2,271,409 - ECD_02194 0.33 +0.4 2,271,666 - ECD_02194 0.89 -0.2 2,271,718 - +1.2 2,271,737 + -0.2 2,271,737 + -0.0 2,271,738 - -0.0 2,271,738 - +1.0 2,271,738 - -0.6 2,271,745 - -0.0 2,272,025 - ECD_02195 0.26 -0.3
Or see this region's nucleotide sequence