Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02017 and ECD_02018 are separated by 47 nucleotides ECD_02018 and ECD_02019 are separated by 3 nucleotides ECD_02019 and ECD_02020 are separated by 30 nucleotides ECD_02020 and ECD_02021 are separated by 9 nucleotides
ECD_02017: ECD_02017 - galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding, at 2,069,638 to 2,070,678
_02017
ECD_02018: ECD_02018 - galactitol-specific enzyme IIC component of PTS, at 2,070,726 to 2,072,081
_02018
ECD_02019: ECD_02019 - galactitol-specific enzyme IIB component of PTS, at 2,072,085 to 2,072,369
_02019
ECD_02020: ECD_02020 - galactitol-specific enzyme IIA component of PTS, at 2,072,400 to 2,072,852
_02020
ECD_02021: ECD_02021 - D-tagatose 1,6-bisphosphate aldolase 2, subunit, at 2,072,862 to 2,074,124
_02021
Position (kb)
2070
2071
2072
2073 Strain fitness (log2 ratio)
-2
-1
0
1 at 2069.752 kb on - strand, within ECD_02017 at 2069.752 kb on - strand, within ECD_02017 at 2069.811 kb on - strand, within ECD_02017 at 2069.852 kb on - strand, within ECD_02017 at 2070.049 kb on - strand, within ECD_02017 at 2070.184 kb on - strand, within ECD_02017 at 2070.993 kb on - strand, within ECD_02018 at 2071.306 kb on - strand, within ECD_02018 at 2071.526 kb on - strand, within ECD_02018 at 2071.548 kb on - strand, within ECD_02018 at 2071.554 kb on - strand, within ECD_02018 at 2071.608 kb on - strand, within ECD_02018 at 2072.095 kb on - strand at 2072.649 kb on - strand, within ECD_02020 at 2072.941 kb on - strand at 2072.941 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,069,752 - ECD_02017 0.11 -0.4 2,069,752 - ECD_02017 0.11 -0.8 2,069,811 - ECD_02017 0.17 -0.0 2,069,852 - ECD_02017 0.21 -2.2 2,070,049 - ECD_02017 0.39 -0.3 2,070,184 - ECD_02017 0.52 +0.2 2,070,993 - ECD_02018 0.20 -0.3 2,071,306 - ECD_02018 0.43 +0.5 2,071,526 - ECD_02018 0.59 +0.1 2,071,548 - ECD_02018 0.61 -0.6 2,071,554 - ECD_02018 0.61 -0.3 2,071,608 - ECD_02018 0.65 -0.3 2,072,095 - -0.3 2,072,649 - ECD_02020 0.55 +0.9 2,072,941 - -0.2 2,072,941 - -0.5
Or see this region's nucleotide sequence