Strain Fitness in Escherichia coli BL21 around ECD_01868
Experiment: N4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | N4 |
---|---|---|---|---|---|
remove | |||||
1,927,773 | - | +1.9 | |||
1,927,773 | - | -0.0 | |||
1,928,088 | + | ECD_01867 | 0.40 | +0.5 | |
1,928,296 | + | ECD_01867 | 0.61 | +1.9 | |
1,928,646 | + | +0.9 | |||
1,928,647 | - | -0.5 | |||
1,928,895 | - | ECD_01868 | 0.13 | +0.9 | |
1,928,895 | - | ECD_01868 | 0.13 | -0.2 | |
1,929,106 | - | ECD_01868 | 0.27 | +0.1 | |
1,929,128 | + | ECD_01868 | 0.28 | -1.0 | |
1,929,243 | - | ECD_01868 | 0.36 | -0.5 | |
1,929,387 | + | ECD_01868 | 0.46 | -1.1 | |
1,929,550 | + | ECD_01868 | 0.56 | -0.7 | |
1,929,619 | + | ECD_01868 | 0.61 | +0.2 | |
1,929,622 | - | ECD_01868 | 0.61 | +0.4 | |
1,930,133 | + | -0.3 | |||
1,930,341 | + | +0.5 | |||
1,930,418 | + | ECD_01869 | 0.14 | +0.1 | |
1,930,429 | - | ECD_01869 | 0.15 | -0.4 | |
1,930,479 | - | ECD_01869 | 0.20 | -0.1 | |
1,930,836 | - | ECD_01869 | 0.56 | -0.5 | |
1,930,836 | - | ECD_01869 | 0.56 | -0.7 | |
1,930,837 | + | ECD_01869 | 0.56 | +0.3 | |
1,931,010 | - | ECD_01869 | 0.74 | +0.3 |
Or see this region's nucleotide sequence