Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01365 and ECD_01366 are separated by 13 nucleotides ECD_01366 and ECD_01367 are separated by 50 nucleotides ECD_01367 and ECD_01368 are separated by 200 nucleotides
ECD_01365: ECD_01365 - putative esterase, at 1,432,425 to 1,434,182
_01365
ECD_01366: ECD_01366 - putative phosphatase inner membrane protein, at 1,434,196 to 1,435,488
_01366
ECD_01367: ECD_01367 - NADH-azoreductase, FMN-dependent, at 1,435,539 to 1,436,144
_01367
ECD_01368: ECD_01368 - putative ATP-dependent helicase, at 1,436,345 to 1,440,247
_01368
Position (kb) 1434
1435
1436 Strain fitness (log2 ratio) -1
0
1 at 1433.689 kb on + strand, within ECD_01365 at 1434.035 kb on + strand at 1434.576 kb on + strand, within ECD_01366 at 1434.600 kb on + strand, within ECD_01366 at 1434.754 kb on - strand, within ECD_01366 at 1434.866 kb on + strand, within ECD_01366 at 1434.866 kb on + strand, within ECD_01366 at 1434.941 kb on + strand, within ECD_01366 at 1435.486 kb on + strand at 1435.486 kb on + strand at 1435.512 kb on + strand at 1435.678 kb on + strand, within ECD_01367 at 1435.855 kb on + strand, within ECD_01367
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 1,433,689 + ECD_01365 0.72 +0.9 1,434,035 + -0.2 1,434,576 + ECD_01366 0.29 -0.3 1,434,600 + ECD_01366 0.31 +0.1 1,434,754 - ECD_01366 0.43 +0.9 1,434,866 + ECD_01366 0.52 +0.7 1,434,866 + ECD_01366 0.52 +0.9 1,434,941 + ECD_01366 0.58 +1.2 1,435,486 + -0.1 1,435,486 + -0.1 1,435,512 + +0.6 1,435,678 + ECD_01367 0.23 +0.6 1,435,855 + ECD_01367 0.52 -0.1
Or see this region's nucleotide sequence