Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01287 and ECD_01288 are separated by 20 nucleotides ECD_01288 and ECD_01289 overlap by 14 nucleotides ECD_01289 and ECD_01290 are separated by 30 nucleotides
ECD_01287: ECD_01287 - putative ABC sugar transporter periplasmic binding protein, at 1,358,275 to 1,359,567
_01287
ECD_01288: ECD_01288 - putative sugar ABC transporter permease, at 1,359,588 to 1,360,469
_01288
ECD_01289: ECD_01289 - putative sugar ABC transporter permease, at 1,360,456 to 1,361,298
_01289
ECD_01290: ECD_01290 - putative Zn-dependent NAD(P)-binding oxidoreductase, at 1,361,329 to 1,362,381
_01290
Position (kb)
1360
1361
1362 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1359.483 kb on + strand at 1359.516 kb on + strand at 1359.765 kb on + strand, within ECD_01288 at 1359.766 kb on - strand, within ECD_01288 at 1359.766 kb on - strand, within ECD_01288 at 1360.032 kb on + strand, within ECD_01288 at 1360.284 kb on + strand, within ECD_01288 at 1360.336 kb on + strand, within ECD_01288 at 1360.412 kb on + strand at 1360.808 kb on - strand, within ECD_01289 at 1360.809 kb on + strand, within ECD_01289 at 1360.810 kb on - strand, within ECD_01289 at 1361.179 kb on + strand, within ECD_01289 at 1361.239 kb on + strand at 1361.314 kb on + strand at 1361.642 kb on + strand, within ECD_01290 at 1361.969 kb on + strand, within ECD_01290 at 1361.973 kb on + strand, within ECD_01290 at 1362.091 kb on + strand, within ECD_01290
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 1,359,483 + -0.6 1,359,516 + +0.5 1,359,765 + ECD_01288 0.20 +0.2 1,359,766 - ECD_01288 0.20 +0.1 1,359,766 - ECD_01288 0.20 +0.2 1,360,032 + ECD_01288 0.50 -0.4 1,360,284 + ECD_01288 0.79 -0.6 1,360,336 + ECD_01288 0.85 -1.0 1,360,412 + +1.0 1,360,808 - ECD_01289 0.42 +0.3 1,360,809 + ECD_01289 0.42 +0.8 1,360,810 - ECD_01289 0.42 +2.8 1,361,179 + ECD_01289 0.86 +0.3 1,361,239 + -0.5 1,361,314 + +0.1 1,361,642 + ECD_01290 0.30 -0.9 1,361,969 + ECD_01290 0.61 +0.5 1,361,973 + ECD_01290 0.61 +0.6 1,362,091 + ECD_01290 0.72 +0.6
Or see this region's nucleotide sequence