Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00772 and ECD_00773 are separated by 264 nucleotides ECD_00773 and ECD_00774 are separated by 275 nucleotides
ECD_00772: ECD_00772 - catecholate siderophore receptor, at 823,241 to 825,523
_00772
ECD_00773: ECD_00773 - colanic acid mucoidy stimulation protein, at 825,788 to 826,048
_00773
ECD_00774: ECD_00774 - 23S rRNA m(6)A1618 methyltransferase, SAM-dependent, at 826,324 to 827,250
_00774
Position (kb) 825
826
827 Strain fitness (log2 ratio) -1
0
1 at 824.903 kb on - strand, within ECD_00772 at 825.010 kb on + strand, within ECD_00772 at 825.133 kb on + strand, within ECD_00772 at 825.136 kb on - strand, within ECD_00772 at 825.167 kb on - strand, within ECD_00772 at 825.168 kb on + strand, within ECD_00772 at 825.168 kb on + strand, within ECD_00772 at 825.168 kb on + strand, within ECD_00772 at 825.168 kb on + strand, within ECD_00772 at 825.168 kb on + strand, within ECD_00772 at 825.168 kb on + strand, within ECD_00772 at 825.169 kb on - strand, within ECD_00772 at 825.169 kb on - strand, within ECD_00772 at 825.194 kb on - strand, within ECD_00772 at 825.410 kb on - strand at 825.458 kb on - strand at 825.546 kb on - strand at 825.705 kb on - strand at 825.987 kb on + strand, within ECD_00773 at 826.029 kb on - strand at 826.067 kb on - strand at 826.220 kb on + strand at 826.269 kb on - strand at 826.323 kb on + strand at 826.672 kb on - strand, within ECD_00774 at 826.699 kb on + strand, within ECD_00774
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 824,903 - ECD_00772 0.73 -1.3 825,010 + ECD_00772 0.77 +0.6 825,133 + ECD_00772 0.83 +0.4 825,136 - ECD_00772 0.83 +0.1 825,167 - ECD_00772 0.84 +1.0 825,168 + ECD_00772 0.84 +0.5 825,168 + ECD_00772 0.84 +0.2 825,168 + ECD_00772 0.84 +1.5 825,168 + ECD_00772 0.84 +0.2 825,168 + ECD_00772 0.84 -0.3 825,168 + ECD_00772 0.84 +0.4 825,169 - ECD_00772 0.84 +0.9 825,169 - ECD_00772 0.84 +0.1 825,194 - ECD_00772 0.86 -1.1 825,410 - -0.1 825,458 - -0.1 825,546 - +0.2 825,705 - +0.4 825,987 + ECD_00773 0.76 +0.8 826,029 - -0.5 826,067 - -1.1 826,220 + +0.0 826,269 - -0.4 826,323 + +1.4 826,672 - ECD_00774 0.38 -1.3 826,699 + ECD_00774 0.40 -0.8
Or see this region's nucleotide sequence