Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00768 and ECD_00769 are separated by 228 nucleotides ECD_00769 and ECD_00770 are separated by 264 nucleotides ECD_00770 and ECD_00771 are separated by 73 nucleotides
ECD_00768: ECD_00768 - putative dehydrogenase, at 820,343 to 821,428
_00768
ECD_00769: ECD_00769 - DUF1471 family putative periplasmic protein, at 821,657 to 821,917
_00769
ECD_00770: ECD_00770 - DksA-type zinc finger protein, at 822,182 to 822,448
_00770
ECD_00771: ECD_00771 - Fe(II)-dependent oxygenase superfamily protein, at 822,522 to 823,199
_00771
Position (kb) 821
822 Strain fitness (log2 ratio) -1
0
1 at 820.930 kb on + strand, within ECD_00768 at 821.044 kb on + strand, within ECD_00768 at 821.150 kb on - strand, within ECD_00768 at 821.203 kb on + strand, within ECD_00768 at 821.204 kb on - strand, within ECD_00768 at 821.471 kb on + strand at 821.472 kb on - strand at 821.544 kb on + strand at 821.544 kb on + strand at 821.545 kb on - strand at 821.664 kb on + strand at 821.718 kb on + strand, within ECD_00769 at 822.468 kb on + strand at 822.469 kb on - strand at 822.469 kb on - strand at 822.469 kb on - strand at 822.475 kb on - strand at 822.486 kb on + strand at 822.486 kb on + strand at 822.564 kb on - strand at 822.618 kb on - strand, within ECD_00771 at 822.628 kb on - strand, within ECD_00771 at 822.684 kb on - strand, within ECD_00771 at 822.745 kb on + strand, within ECD_00771 at 822.746 kb on - strand, within ECD_00771 at 822.823 kb on + strand, within ECD_00771 at 822.824 kb on - strand, within ECD_00771
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 820,930 + ECD_00768 0.54 -1.3 821,044 + ECD_00768 0.65 -0.5 821,150 - ECD_00768 0.74 +0.4 821,203 + ECD_00768 0.79 +0.6 821,204 - ECD_00768 0.79 +1.4 821,471 + -0.3 821,472 - +0.4 821,544 + +0.0 821,544 + +0.5 821,545 - +1.0 821,664 + -1.5 821,718 + ECD_00769 0.23 +0.8 822,468 + +0.0 822,469 - -0.4 822,469 - +0.1 822,469 - +0.1 822,475 - -0.3 822,486 + +0.0 822,486 + -1.7 822,564 - +0.5 822,618 - ECD_00771 0.14 -1.0 822,628 - ECD_00771 0.16 -0.4 822,684 - ECD_00771 0.24 +0.7 822,745 + ECD_00771 0.33 -0.7 822,746 - ECD_00771 0.33 -0.7 822,823 + ECD_00771 0.44 -0.3 822,824 - ECD_00771 0.45 +0.5
Or see this region's nucleotide sequence