Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00743 and ECD_00744 overlap by 14 nucleotides ECD_00744 and ECD_00745 overlap by 8 nucleotides ECD_00745 and ECD_00746 are separated by 578 nucleotides
ECD_00743: ECD_00743 - 8-amino-7-oxononanoate synthase, at 794,374 to 795,528
_00743
ECD_00744: ECD_00744 - malonyl-ACP O-methyltransferase, SAM-dependent, at 795,515 to 796,270
_00744
ECD_00745: ECD_00745 - dethiobiotin synthetase, at 796,263 to 796,940
_00745
ECD_00746: ECD_00746 - exision nuclease of nucleotide excision repair, DNA damage recognition component, at 797,519 to 799,540
_00746
Position (kb) 796
797 Strain fitness (log2 ratio) -2
-1
0
1 at 795.354 kb on + strand, within ECD_00743 at 795.526 kb on + strand at 795.573 kb on - strand at 795.591 kb on + strand, within ECD_00744 at 795.651 kb on + strand, within ECD_00744 at 795.651 kb on + strand, within ECD_00744 at 795.724 kb on - strand, within ECD_00744 at 795.779 kb on + strand, within ECD_00744 at 795.779 kb on + strand, within ECD_00744 at 796.236 kb on - strand at 796.414 kb on + strand, within ECD_00745 at 796.439 kb on - strand, within ECD_00745 at 796.477 kb on + strand, within ECD_00745 at 796.696 kb on + strand, within ECD_00745 at 796.718 kb on + strand, within ECD_00745 at 796.719 kb on - strand, within ECD_00745 at 796.721 kb on + strand, within ECD_00745 at 796.751 kb on - strand, within ECD_00745 at 796.825 kb on - strand, within ECD_00745 at 796.825 kb on - strand, within ECD_00745 at 796.826 kb on + strand, within ECD_00745 at 796.950 kb on - strand at 796.950 kb on - strand at 797.165 kb on + strand at 797.462 kb on + strand at 797.462 kb on + strand at 797.466 kb on + strand at 797.481 kb on + strand at 797.481 kb on + strand at 797.703 kb on + strand at 797.703 kb on + strand at 797.704 kb on - strand at 797.738 kb on + strand, within ECD_00746 at 797.804 kb on + strand, within ECD_00746 at 797.819 kb on + strand, within ECD_00746 at 797.819 kb on + strand, within ECD_00746 at 797.819 kb on + strand, within ECD_00746 at 797.820 kb on - strand, within ECD_00746 at 797.820 kb on - strand, within ECD_00746
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 795,354 + ECD_00743 0.85 -0.8 795,526 + +0.8 795,573 - +0.9 795,591 + ECD_00744 0.10 -1.5 795,651 + ECD_00744 0.18 +0.8 795,651 + ECD_00744 0.18 +1.1 795,724 - ECD_00744 0.28 -0.5 795,779 + ECD_00744 0.35 -0.7 795,779 + ECD_00744 0.35 -1.9 796,236 - +0.9 796,414 + ECD_00745 0.22 +0.3 796,439 - ECD_00745 0.26 +0.4 796,477 + ECD_00745 0.32 +0.5 796,696 + ECD_00745 0.64 +0.6 796,718 + ECD_00745 0.67 +0.3 796,719 - ECD_00745 0.67 +0.2 796,721 + ECD_00745 0.68 +1.2 796,751 - ECD_00745 0.72 -0.2 796,825 - ECD_00745 0.83 -0.7 796,825 - ECD_00745 0.83 +0.5 796,826 + ECD_00745 0.83 -0.0 796,950 - -0.1 796,950 - +0.3 797,165 + -0.3 797,462 + -0.4 797,462 + +0.6 797,466 + -0.0 797,481 + -0.6 797,481 + +0.9 797,703 + +0.9 797,703 + -0.1 797,704 - -0.4 797,738 + ECD_00746 0.11 -0.6 797,804 + ECD_00746 0.14 +1.3 797,819 + ECD_00746 0.15 +0.2 797,819 + ECD_00746 0.15 -0.7 797,819 + ECD_00746 0.15 +0.2 797,820 - ECD_00746 0.15 -0.8 797,820 - ECD_00746 0.15 +0.4
Or see this region's nucleotide sequence