Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00416 and ECD_00417 are separated by 211 nucleotides ECD_00417 and ECD_00418 are separated by 13 nucleotides ECD_00418 and ECD_00419 are separated by 69 nucleotides
ECD_00416: ECD_00416 - mechanosensitive channel protein, intermediate conductance, K+ regulated, at 455,582 to 458,944
_00416
ECD_00417: ECD_00417 - DUF2496 family protein, at 459,156 to 459,317
_00417
ECD_00418: ECD_00418 - primosomal replication protein N'', at 459,331 to 459,858
_00418
ECD_00419: ECD_00419 - DUF454 family inner membrane protein, at 459,928 to 460,305
_00419
Position (kb) 459
460 Strain fitness (log2 ratio) -2
-1
0
1 at 458.229 kb on - strand, within ECD_00416 at 458.236 kb on + strand, within ECD_00416 at 458.237 kb on - strand, within ECD_00416 at 458.237 kb on - strand, within ECD_00416 at 458.237 kb on - strand, within ECD_00416 at 458.239 kb on + strand, within ECD_00416 at 458.239 kb on + strand, within ECD_00416 at 458.239 kb on + strand, within ECD_00416 at 458.248 kb on + strand, within ECD_00416 at 458.248 kb on + strand, within ECD_00416 at 458.252 kb on + strand, within ECD_00416 at 458.252 kb on + strand, within ECD_00416 at 458.260 kb on + strand, within ECD_00416 at 458.344 kb on - strand, within ECD_00416 at 458.446 kb on + strand, within ECD_00416 at 458.463 kb on + strand, within ECD_00416 at 458.463 kb on + strand, within ECD_00416 at 458.467 kb on + strand, within ECD_00416 at 458.468 kb on - strand, within ECD_00416 at 458.468 kb on - strand, within ECD_00416 at 458.468 kb on - strand, within ECD_00416 at 458.578 kb on + strand, within ECD_00416 at 458.750 kb on + strand at 458.750 kb on + strand at 458.751 kb on - strand at 458.780 kb on - strand at 458.965 kb on + strand at 459.059 kb on + strand at 459.076 kb on - strand at 459.127 kb on - strand at 459.137 kb on + strand at 459.138 kb on - strand at 459.151 kb on - strand at 459.184 kb on - strand, within ECD_00417 at 459.207 kb on + strand, within ECD_00417 at 459.207 kb on + strand, within ECD_00417 at 459.208 kb on - strand, within ECD_00417 at 459.208 kb on - strand, within ECD_00417 at 459.317 kb on + strand at 459.317 kb on + strand at 459.318 kb on - strand at 459.318 kb on - strand at 459.318 kb on - strand at 459.318 kb on - strand at 459.318 kb on - strand at 459.522 kb on + strand, within ECD_00418 at 459.522 kb on + strand, within ECD_00418 at 459.528 kb on + strand, within ECD_00418 at 459.889 kb on - strand at 459.928 kb on - strand at 459.944 kb on + strand at 459.945 kb on - strand at 460.103 kb on - strand, within ECD_00419 at 460.103 kb on - strand, within ECD_00419 at 460.106 kb on + strand, within ECD_00419 at 460.106 kb on + strand, within ECD_00419 at 460.106 kb on + strand, within ECD_00419 at 460.106 kb on + strand, within ECD_00419 at 460.106 kb on + strand, within ECD_00419 at 460.106 kb on + strand, within ECD_00419 at 460.258 kb on + strand, within ECD_00419 at 460.258 kb on + strand, within ECD_00419 at 460.258 kb on + strand, within ECD_00419 at 460.259 kb on - strand, within ECD_00419 at 460.259 kb on - strand, within ECD_00419 at 460.261 kb on - strand, within ECD_00419 at 460.261 kb on - strand, within ECD_00419 at 460.261 kb on - strand, within ECD_00419
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 458,229 - ECD_00416 0.79 -0.5 458,236 + ECD_00416 0.79 -0.2 458,237 - ECD_00416 0.79 -0.1 458,237 - ECD_00416 0.79 +0.5 458,237 - ECD_00416 0.79 -0.3 458,239 + ECD_00416 0.79 -0.2 458,239 + ECD_00416 0.79 +1.4 458,239 + ECD_00416 0.79 +0.3 458,248 + ECD_00416 0.79 -0.2 458,248 + ECD_00416 0.79 -0.5 458,252 + ECD_00416 0.79 -0.5 458,252 + ECD_00416 0.79 +0.7 458,260 + ECD_00416 0.80 -0.2 458,344 - ECD_00416 0.82 -2.2 458,446 + ECD_00416 0.85 +1.3 458,463 + ECD_00416 0.86 +0.9 458,463 + ECD_00416 0.86 +0.1 458,467 + ECD_00416 0.86 -0.1 458,468 - ECD_00416 0.86 -0.2 458,468 - ECD_00416 0.86 +0.5 458,468 - ECD_00416 0.86 -0.2 458,578 + ECD_00416 0.89 +1.0 458,750 + -1.8 458,750 + +0.5 458,751 - +0.1 458,780 - +0.1 458,965 + -0.7 459,059 + -0.2 459,076 - -0.0 459,127 - -0.9 459,137 + -0.7 459,138 - -0.4 459,151 - +0.2 459,184 - ECD_00417 0.17 -0.7 459,207 + ECD_00417 0.31 -0.3 459,207 + ECD_00417 0.31 -0.7 459,208 - ECD_00417 0.32 -1.1 459,208 - ECD_00417 0.32 -0.5 459,317 + -0.9 459,317 + +0.1 459,318 - +0.4 459,318 - +1.7 459,318 - -0.3 459,318 - +0.7 459,318 - -0.3 459,522 + ECD_00418 0.36 +0.3 459,522 + ECD_00418 0.36 +0.6 459,528 + ECD_00418 0.37 -0.5 459,889 - -0.7 459,928 - -0.1 459,944 + -0.0 459,945 - -0.8 460,103 - ECD_00419 0.46 +1.6 460,103 - ECD_00419 0.46 -0.3 460,106 + ECD_00419 0.47 -0.4 460,106 + ECD_00419 0.47 +0.5 460,106 + ECD_00419 0.47 +0.2 460,106 + ECD_00419 0.47 -0.0 460,106 + ECD_00419 0.47 +0.8 460,106 + ECD_00419 0.47 -0.6 460,258 + ECD_00419 0.87 +0.4 460,258 + ECD_00419 0.87 -0.1 460,258 + ECD_00419 0.87 +1.4 460,259 - ECD_00419 0.88 +0.7 460,259 - ECD_00419 0.88 +0.7 460,261 - ECD_00419 0.88 -0.5 460,261 - ECD_00419 0.88 +0.3 460,261 - ECD_00419 0.88 -0.9
Or see this region's nucleotide sequence