Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00289 and ECD_00290 are separated by 235 nucleotides ECD_00290 and ECD_00291 overlap by 11 nucleotides
ECD_00289: ECD_00289 - propionate--CoA ligase, at 322,335 to 324,221
_00289
ECD_00290: ECD_00290 - cytosine transporter, at 324,457 to 325,716
_00290
ECD_00291: ECD_00291 - cytosine/isoguanine deaminase, at 325,706 to 326,989
_00291
Position (kb) 324
325
326 Strain fitness (log2 ratio) -2
-1
0
1
2 at 323.462 kb on + strand, within ECD_00289 at 323.491 kb on - strand, within ECD_00289 at 323.583 kb on + strand, within ECD_00289 at 323.583 kb on + strand, within ECD_00289 at 323.583 kb on + strand, within ECD_00289 at 323.584 kb on - strand, within ECD_00289 at 323.584 kb on - strand, within ECD_00289 at 323.584 kb on - strand, within ECD_00289 at 323.584 kb on - strand, within ECD_00289 at 323.584 kb on - strand, within ECD_00289 at 323.590 kb on - strand, within ECD_00289 at 323.685 kb on - strand, within ECD_00289 at 323.754 kb on + strand, within ECD_00289 at 323.824 kb on + strand, within ECD_00289 at 323.824 kb on + strand, within ECD_00289 at 323.824 kb on + strand, within ECD_00289 at 323.873 kb on + strand, within ECD_00289 at 323.873 kb on + strand, within ECD_00289 at 324.220 kb on - strand at 324.564 kb on + strand at 324.564 kb on + strand at 324.565 kb on - strand at 324.565 kb on - strand at 324.598 kb on - strand, within ECD_00290 at 324.598 kb on - strand, within ECD_00290 at 324.598 kb on - strand, within ECD_00290 at 324.598 kb on - strand, within ECD_00290 at 324.633 kb on + strand, within ECD_00290 at 324.652 kb on + strand, within ECD_00290 at 324.841 kb on - strand, within ECD_00290 at 324.867 kb on - strand, within ECD_00290 at 325.001 kb on + strand, within ECD_00290 at 325.282 kb on - strand, within ECD_00290 at 325.310 kb on - strand, within ECD_00290 at 325.408 kb on + strand, within ECD_00290 at 325.408 kb on + strand, within ECD_00290 at 325.408 kb on + strand, within ECD_00290 at 325.408 kb on + strand, within ECD_00290 at 325.411 kb on - strand, within ECD_00290 at 325.449 kb on + strand, within ECD_00290 at 325.449 kb on + strand, within ECD_00290 at 325.450 kb on - strand, within ECD_00290 at 325.450 kb on - strand, within ECD_00290 at 325.483 kb on + strand, within ECD_00290 at 325.622 kb on + strand at 325.639 kb on + strand at 325.830 kb on + strand at 325.892 kb on - strand, within ECD_00291 at 326.226 kb on + strand, within ECD_00291 at 326.244 kb on + strand, within ECD_00291 at 326.283 kb on - strand, within ECD_00291 at 326.302 kb on + strand, within ECD_00291 at 326.466 kb on - strand, within ECD_00291 at 326.477 kb on + strand, within ECD_00291 at 326.478 kb on - strand, within ECD_00291 at 326.478 kb on - strand, within ECD_00291 at 326.479 kb on + strand, within ECD_00291 at 326.479 kb on + strand, within ECD_00291
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 323,462 + ECD_00289 0.60 +0.5 323,491 - ECD_00289 0.61 -1.2 323,583 + ECD_00289 0.66 +0.5 323,583 + ECD_00289 0.66 -0.3 323,583 + ECD_00289 0.66 -0.6 323,584 - ECD_00289 0.66 -0.2 323,584 - ECD_00289 0.66 -1.4 323,584 - ECD_00289 0.66 +0.0 323,584 - ECD_00289 0.66 -0.6 323,584 - ECD_00289 0.66 -0.4 323,590 - ECD_00289 0.67 -0.5 323,685 - ECD_00289 0.72 -0.5 323,754 + ECD_00289 0.75 -0.5 323,824 + ECD_00289 0.79 +1.2 323,824 + ECD_00289 0.79 +1.3 323,824 + ECD_00289 0.79 +0.3 323,873 + ECD_00289 0.82 +0.4 323,873 + ECD_00289 0.82 +0.3 324,220 - -0.4 324,564 + -0.3 324,564 + -0.2 324,565 - +0.1 324,565 - -0.5 324,598 - ECD_00290 0.11 +0.5 324,598 - ECD_00290 0.11 +1.5 324,598 - ECD_00290 0.11 -0.1 324,598 - ECD_00290 0.11 +0.7 324,633 + ECD_00290 0.14 +2.5 324,652 + ECD_00290 0.15 +0.6 324,841 - ECD_00290 0.30 -0.4 324,867 - ECD_00290 0.33 -0.4 325,001 + ECD_00290 0.43 -0.1 325,282 - ECD_00290 0.65 +0.8 325,310 - ECD_00290 0.68 -1.8 325,408 + ECD_00290 0.75 -0.4 325,408 + ECD_00290 0.75 +0.2 325,408 + ECD_00290 0.75 +0.2 325,408 + ECD_00290 0.75 -0.5 325,411 - ECD_00290 0.76 +0.6 325,449 + ECD_00290 0.79 +0.3 325,449 + ECD_00290 0.79 +0.0 325,450 - ECD_00290 0.79 -0.9 325,450 - ECD_00290 0.79 +1.1 325,483 + ECD_00290 0.81 +1.2 325,622 + +0.6 325,639 + +0.4 325,830 + +0.3 325,892 - ECD_00291 0.14 +0.3 326,226 + ECD_00291 0.40 +0.7 326,244 + ECD_00291 0.42 +0.2 326,283 - ECD_00291 0.45 -0.3 326,302 + ECD_00291 0.46 -0.4 326,466 - ECD_00291 0.59 -0.5 326,477 + ECD_00291 0.60 -2.3 326,478 - ECD_00291 0.60 -0.2 326,478 - ECD_00291 0.60 +0.2 326,479 + ECD_00291 0.60 -0.1 326,479 + ECD_00291 0.60 -0.6
Or see this region's nucleotide sequence