Strain Fitness in Escherichia coli BL21 around ECD_00111

Experiment: N4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N4
122,005	+		ECD_00109	0.85	-0.6
122,006	-		ECD_00109	0.85	+1.2
122,093	+				-0.3
122,098	-				+1.5
122,098	-				+0.9
122,229	+		ECD_00110	0.17	-0.1
122,230	-		ECD_00110	0.17	-1.0
122,259	-		ECD_00110	0.20	-0.0
122,276	+		ECD_00110	0.22	-0.3
122,340	+		ECD_00110	0.30	-1.0
122,341	-		ECD_00110	0.30	+0.3
122,365	+		ECD_00110	0.33	+0.6
122,365	+		ECD_00110	0.33	-0.3
122,365	+		ECD_00110	0.33	-1.0
122,366	-		ECD_00110	0.33	+0.7
122,366	-		ECD_00110	0.33	+1.2
122,366	-		ECD_00110	0.33	-0.6
122,366	-		ECD_00110	0.33	-0.8
122,385	+		ECD_00110	0.35	+0.1
122,385	+		ECD_00110	0.35	-0.9
122,503	-		ECD_00110	0.49	+0.4
122,669	+		ECD_00110	0.68	+0.4
122,705	+		ECD_00110	0.72	+1.4
122,705	+		ECD_00110	0.72	-0.5
122,706	-		ECD_00110	0.73	-0.8
122,706	-		ECD_00110	0.73	-0.2
122,707	+		ECD_00110	0.73	+0.5
122,707	+		ECD_00110	0.73	+0.1
122,707	+		ECD_00110	0.73	+2.0
122,707	+		ECD_00110	0.73	-0.2
122,708	-		ECD_00110	0.73	-0.2
122,708	-		ECD_00110	0.73	-0.5
122,782	+		ECD_00110	0.81	+0.4
122,945	+				+0.3
122,962	-				+1.2
122,976	-				-0.2
123,034	-				+0.7
123,037	+				+0.5
123,037	+				-0.7
123,066	-				-0.3
123,153	-		ECD_00111	0.12	-0.0
123,244	+		ECD_00111	0.19	-2.2
123,244	+		ECD_00111	0.19	+0.1
123,302	+		ECD_00111	0.23	-0.4
123,302	+		ECD_00111	0.23	-0.5
123,303	-		ECD_00111	0.23	-2.0
123,303	-		ECD_00111	0.23	+0.1
123,303	-		ECD_00111	0.23	+0.8
123,307	-		ECD_00111	0.24	-0.4
123,351	+		ECD_00111	0.27	-0.4
123,356	-		ECD_00111	0.27	-0.8
123,429	+		ECD_00111	0.32	-2.9
123,444	-		ECD_00111	0.34	-0.7
123,446	-		ECD_00111	0.34	+1.0
123,446	-		ECD_00111	0.34	-0.1
123,458	+		ECD_00111	0.35	-0.1
123,458	+		ECD_00111	0.35	+0.8
123,459	-		ECD_00111	0.35	-0.8
123,482	-		ECD_00111	0.36	+0.7
123,611	+		ECD_00111	0.46	-0.0
123,612	-		ECD_00111	0.46	+0.1
123,629	+		ECD_00111	0.47	-0.4
123,630	-		ECD_00111	0.47	+0.5
123,730	-		ECD_00111	0.54	+0.0
123,833	-		ECD_00111	0.62	-0.0
124,007	+		ECD_00111	0.75	-0.2
124,008	-		ECD_00111	0.75	-0.6
124,012	-		ECD_00111	0.75	-0.5
124,235	-				-0.8
124,235	-				+0.2
124,235	-				-0.4
124,291	-				-1.2
124,299	+				-0.2
124,389	-				+0.5
124,708	+				-0.3
124,728	-				-0.5
124,731	+				-0.8
124,749	+				+0.6
124,750	-				-0.2
124,751	+				-0.1
124,883	+				-0.3
124,903	+				+0.0
124,903	+				-0.4
125,188	+		ECD_00112	0.38	+0.5
125,188	+		ECD_00112	0.38	-0.1
125,188	+		ECD_00112	0.38	+1.8
125,223	+		ECD_00112	0.43	-0.6
125,233	+		ECD_00112	0.44	-0.1
125,236	+		ECD_00112	0.44	-1.3