Strain Fitness in Escherichia coli BL21 around ECD_04156

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04154 and ECD_04155 overlap by 4 nucleotidesECD_04155 and ECD_04156 overlap by 4 nucleotidesECD_04156 and ECD_04157 are separated by 44 nucleotides ECD_04154: ECD_04154 - ferric citrate ABC transporter permease, at 4,424,855 to 4,425,811 _04154 ECD_04155: ECD_04155 - ferric citrate ABC transporter permease, at 4,425,808 to 4,426,806 _04155 ECD_04156: ECD_04156 - ferric citrate ABC transporter periplasmic binding protein, at 4,426,803 to 4,427,705 _04156 ECD_04157: ECD_04157 - TonB-dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR-interacting protein, at 4,427,750 to 4,430,074 _04157 Position (kb) 4426 4427 4428Strain fitness (log2 ratio) -1 0 1 2at 4425.910 kb on + strand, within ECD_04155at 4425.911 kb on - strand, within ECD_04155at 4425.962 kb on - strand, within ECD_04155at 4426.073 kb on - strand, within ECD_04155at 4426.077 kb on + strand, within ECD_04155at 4426.077 kb on + strand, within ECD_04155at 4426.077 kb on + strand, within ECD_04155at 4426.077 kb on + strand, within ECD_04155at 4426.077 kb on + strand, within ECD_04155at 4426.078 kb on - strand, within ECD_04155at 4426.078 kb on - strand, within ECD_04155at 4426.078 kb on - strand, within ECD_04155at 4426.078 kb on - strand, within ECD_04155at 4426.078 kb on - strand, within ECD_04155at 4426.093 kb on + strand, within ECD_04155at 4426.120 kb on - strand, within ECD_04155at 4426.271 kb on + strand, within ECD_04155at 4426.318 kb on - strand, within ECD_04155at 4426.318 kb on - strand, within ECD_04155at 4426.451 kb on + strand, within ECD_04155at 4426.485 kb on + strand, within ECD_04155at 4426.515 kb on + strand, within ECD_04155at 4426.752 kb on + strandat 4426.752 kb on + strandat 4426.752 kb on + strandat 4427.226 kb on - strand, within ECD_04156at 4427.226 kb on - strand, within ECD_04156at 4427.226 kb on - strand, within ECD_04156at 4427.327 kb on + strand, within ECD_04156at 4427.365 kb on + strand, within ECD_04156at 4427.365 kb on + strand, within ECD_04156at 4427.526 kb on - strand, within ECD_04156at 4427.613 kb on - strand, within ECD_04156at 4427.705 kb on + strandat 4427.705 kb on + strandat 4427.705 kb on + strandat 4427.706 kb on - strandat 4427.706 kb on - strandat 4427.706 kb on - strandat 4427.721 kb on - strandat 4427.773 kb on + strandat 4427.773 kb on + strandat 4427.775 kb on + strandat 4427.775 kb on + strandat 4427.775 kb on + strandat 4427.776 kb on - strandat 4427.776 kb on - strandat 4427.799 kb on + strandat 4427.799 kb on + strandat 4427.800 kb on - strandat 4427.800 kb on - strandat 4427.800 kb on - strandat 4427.800 kb on - strandat 4427.800 kb on - strandat 4427.907 kb on + strandat 4427.980 kb on + strandat 4428.052 kb on - strand, within ECD_04157at 4428.073 kb on + strand, within ECD_04157at 4428.073 kb on + strand, within ECD_04157at 4428.092 kb on + strand, within ECD_04157at 4428.106 kb on - strand, within ECD_04157at 4428.106 kb on - strand, within ECD_04157at 4428.141 kb on + strand, within ECD_04157at 4428.141 kb on + strand, within ECD_04157at 4428.141 kb on + strand, within ECD_04157at 4428.142 kb on - strand, within ECD_04157at 4428.142 kb on - strand, within ECD_04157at 4428.147 kb on + strand, within ECD_04157at 4428.147 kb on + strand, within ECD_04157at 4428.147 kb on + strand, within ECD_04157at 4428.157 kb on - strand, within ECD_04157at 4428.157 kb on - strand, within ECD_04157at 4428.202 kb on - strand, within ECD_04157at 4428.417 kb on + strand, within ECD_04157at 4428.418 kb on - strand, within ECD_04157at 4428.418 kb on - strand, within ECD_04157at 4428.423 kb on - strand, within ECD_04157at 4428.480 kb on + strand, within ECD_04157at 4428.481 kb on - strand, within ECD_04157at 4428.481 kb on - strand, within ECD_04157at 4428.511 kb on + strand, within ECD_04157at 4428.513 kb on + strand, within ECD_04157at 4428.514 kb on - strand, within ECD_04157at 4428.514 kb on - strand, within ECD_04157at 4428.580 kb on + strand, within ECD_04157at 4428.628 kb on - strand, within ECD_04157

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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4,425,910 + ECD_04155 0.10 -0.1
4,425,911 - ECD_04155 0.10 +0.5
4,425,962 - ECD_04155 0.15 +0.3
4,426,073 - ECD_04155 0.27 +0.4
4,426,077 + ECD_04155 0.27 +0.1
4,426,077 + ECD_04155 0.27 +0.2
4,426,077 + ECD_04155 0.27 +0.7
4,426,077 + ECD_04155 0.27 -0.5
4,426,077 + ECD_04155 0.27 +2.0
4,426,078 - ECD_04155 0.27 -0.8
4,426,078 - ECD_04155 0.27 +0.2
4,426,078 - ECD_04155 0.27 +0.5
4,426,078 - ECD_04155 0.27 +0.8
4,426,078 - ECD_04155 0.27 +1.2
4,426,093 + ECD_04155 0.29 -0.7
4,426,120 - ECD_04155 0.31 +0.6
4,426,271 + ECD_04155 0.46 +0.2
4,426,318 - ECD_04155 0.51 -0.1
4,426,318 - ECD_04155 0.51 -0.2
4,426,451 + ECD_04155 0.64 +0.8
4,426,485 + ECD_04155 0.68 +0.8
4,426,515 + ECD_04155 0.71 -0.2
4,426,752 + +0.9
4,426,752 + +0.2
4,426,752 + +0.3
4,427,226 - ECD_04156 0.47 +0.4
4,427,226 - ECD_04156 0.47 +1.3
4,427,226 - ECD_04156 0.47 +0.8
4,427,327 + ECD_04156 0.58 +0.5
4,427,365 + ECD_04156 0.62 +0.9
4,427,365 + ECD_04156 0.62 +0.3
4,427,526 - ECD_04156 0.80 +1.1
4,427,613 - ECD_04156 0.90 +0.2
4,427,705 + -0.3
4,427,705 + +0.1
4,427,705 + +0.0
4,427,706 - +0.0
4,427,706 - +0.8
4,427,706 - +0.8
4,427,721 - +0.4
4,427,773 + +0.7
4,427,773 + +0.7
4,427,775 + +0.4
4,427,775 + +0.9
4,427,775 + +0.0
4,427,776 - +0.4
4,427,776 - -0.1
4,427,799 + -1.0
4,427,799 + +0.5
4,427,800 - -0.1
4,427,800 - +0.7
4,427,800 - +0.5
4,427,800 - +0.1
4,427,800 - +0.4
4,427,907 + +0.2
4,427,980 + +0.2
4,428,052 - ECD_04157 0.13 +0.4
4,428,073 + ECD_04157 0.14 +0.5
4,428,073 + ECD_04157 0.14 +0.4
4,428,092 + ECD_04157 0.15 +0.7
4,428,106 - ECD_04157 0.15 +1.0
4,428,106 - ECD_04157 0.15 +0.4
4,428,141 + ECD_04157 0.17 -0.4
4,428,141 + ECD_04157 0.17 +1.0
4,428,141 + ECD_04157 0.17 -0.1
4,428,142 - ECD_04157 0.17 +0.5
4,428,142 - ECD_04157 0.17 -0.2
4,428,147 + ECD_04157 0.17 +0.5
4,428,147 + ECD_04157 0.17 -0.4
4,428,147 + ECD_04157 0.17 +0.1
4,428,157 - ECD_04157 0.18 +1.2
4,428,157 - ECD_04157 0.18 +1.5
4,428,202 - ECD_04157 0.19 +0.1
4,428,417 + ECD_04157 0.29 -0.3
4,428,418 - ECD_04157 0.29 -0.9
4,428,418 - ECD_04157 0.29 -0.2
4,428,423 - ECD_04157 0.29 +0.8
4,428,480 + ECD_04157 0.31 +0.8
4,428,481 - ECD_04157 0.31 +0.1
4,428,481 - ECD_04157 0.31 +0.3
4,428,511 + ECD_04157 0.33 +0.2
4,428,513 + ECD_04157 0.33 +0.1
4,428,514 - ECD_04157 0.33 +0.6
4,428,514 - ECD_04157 0.33 +0.5
4,428,580 + ECD_04157 0.36 +0.2
4,428,628 - ECD_04157 0.38 -0.0

Or see this region's nucleotide sequence