Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03763 and ECD_03764 are separated by 124 nucleotides ECD_03764 and ECD_03765 are separated by 113 nucleotides
ECD_03763: ECD_03763 - putative sulfolipid alpha-glucosidase; alpha-glucosyl fluoride glucosidase, at 3,973,934 to 3,975,937
_03763
ECD_03764: ECD_03764 - putative sulfoquinovose mutarotase, at 3,976,062 to 3,976,988
_03764
ECD_03765: ECD_03765 - sulfoquinovose isomerase, at 3,977,102 to 3,978,343
_03765
Position (kb)
3976
3977 Strain fitness (log2 ratio)
-1
0
1 at 3975.201 kb on - strand, within ECD_03763 at 3975.276 kb on + strand, within ECD_03763 at 3975.276 kb on + strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.366 kb on + strand, within ECD_03763 at 3975.366 kb on + strand, within ECD_03763 at 3975.393 kb on + strand, within ECD_03763 at 3975.393 kb on + strand, within ECD_03763 at 3975.393 kb on + strand, within ECD_03763 at 3975.394 kb on - strand, within ECD_03763 at 3975.394 kb on - strand, within ECD_03763 at 3975.394 kb on - strand, within ECD_03763 at 3975.415 kb on + strand, within ECD_03763 at 3975.415 kb on + strand, within ECD_03763 at 3975.439 kb on - strand, within ECD_03763 at 3975.439 kb on - strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.558 kb on + strand, within ECD_03763 at 3975.583 kb on - strand, within ECD_03763 at 3975.583 kb on - strand, within ECD_03763 at 3975.587 kb on - strand, within ECD_03763 at 3975.622 kb on + strand, within ECD_03763 at 3975.651 kb on - strand, within ECD_03763 at 3975.688 kb on + strand, within ECD_03763 at 3975.731 kb on + strand, within ECD_03763 at 3975.732 kb on - strand, within ECD_03763 at 3975.789 kb on - strand at 3975.800 kb on - strand at 3975.998 kb on + strand at 3976.056 kb on + strand at 3976.122 kb on + strand at 3976.125 kb on + strand at 3976.167 kb on - strand, within ECD_03764 at 3976.414 kb on + strand, within ECD_03764 at 3976.445 kb on - strand, within ECD_03764 at 3976.445 kb on - strand, within ECD_03764 at 3976.461 kb on + strand, within ECD_03764 at 3976.461 kb on + strand, within ECD_03764 at 3976.462 kb on - strand, within ECD_03764 at 3976.478 kb on - strand, within ECD_03764 at 3976.607 kb on - strand, within ECD_03764 at 3976.650 kb on + strand, within ECD_03764 at 3976.709 kb on + strand, within ECD_03764 at 3976.709 kb on + strand, within ECD_03764 at 3976.709 kb on + strand, within ECD_03764 at 3976.710 kb on - strand, within ECD_03764 at 3976.710 kb on - strand, within ECD_03764 at 3976.710 kb on - strand, within ECD_03764 at 3976.732 kb on + strand, within ECD_03764 at 3976.733 kb on - strand, within ECD_03764 at 3976.842 kb on + strand, within ECD_03764 at 3976.843 kb on - strand, within ECD_03764 at 3976.964 kb on + strand at 3976.964 kb on + strand at 3976.964 kb on + strand at 3976.965 kb on - strand at 3976.965 kb on - strand at 3976.965 kb on - strand at 3976.965 kb on - strand at 3976.976 kb on + strand at 3976.977 kb on - strand at 3976.977 kb on - strand at 3976.977 kb on - strand at 3976.980 kb on + strand at 3976.988 kb on + strand at 3976.988 kb on + strand at 3976.988 kb on + strand at 3976.988 kb on + strand at 3976.988 kb on + strand at 3976.989 kb on - strand at 3976.989 kb on - strand at 3976.989 kb on - strand at 3976.989 kb on - strand at 3977.103 kb on + strand at 3977.113 kb on + strand at 3977.113 kb on + strand at 3977.114 kb on - strand at 3977.199 kb on + strand at 3977.200 kb on - strand at 3977.200 kb on - strand at 3977.200 kb on - strand at 3977.204 kb on - strand at 3977.239 kb on + strand, within ECD_03765 at 3977.296 kb on + strand, within ECD_03765 at 3977.296 kb on + strand, within ECD_03765 at 3977.296 kb on + strand, within ECD_03765 at 3977.296 kb on + strand, within ECD_03765 at 3977.297 kb on - strand, within ECD_03765 at 3977.297 kb on - strand, within ECD_03765 at 3977.297 kb on - strand, within ECD_03765 at 3977.297 kb on - strand, within ECD_03765 at 3977.297 kb on - strand, within ECD_03765 at 3977.305 kb on - strand, within ECD_03765 at 3977.334 kb on + strand, within ECD_03765 at 3977.358 kb on + strand, within ECD_03765 at 3977.402 kb on + strand, within ECD_03765 at 3977.443 kb on + strand, within ECD_03765 at 3977.444 kb on - strand, within ECD_03765 at 3977.444 kb on - strand, within ECD_03765 at 3977.446 kb on - strand, within ECD_03765 at 3977.579 kb on + strand, within ECD_03765 at 3977.711 kb on - strand, within ECD_03765 at 3977.791 kb on - strand, within ECD_03765
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,975,201 - ECD_03763 0.63 +0.6 3,975,276 + ECD_03763 0.67 -0.6 3,975,276 + ECD_03763 0.67 +0.5 3,975,277 - ECD_03763 0.67 -0.2 3,975,277 - ECD_03763 0.67 -0.9 3,975,277 - ECD_03763 0.67 +1.0 3,975,277 - ECD_03763 0.67 -0.3 3,975,277 - ECD_03763 0.67 -0.7 3,975,366 + ECD_03763 0.71 +0.5 3,975,366 + ECD_03763 0.71 +0.6 3,975,393 + ECD_03763 0.73 +0.6 3,975,393 + ECD_03763 0.73 -0.4 3,975,393 + ECD_03763 0.73 +0.4 3,975,394 - ECD_03763 0.73 +0.8 3,975,394 - ECD_03763 0.73 +0.5 3,975,394 - ECD_03763 0.73 -0.2 3,975,415 + ECD_03763 0.74 -0.1 3,975,415 + ECD_03763 0.74 +0.1 3,975,439 - ECD_03763 0.75 +0.5 3,975,439 - ECD_03763 0.75 +0.5 3,975,486 + ECD_03763 0.77 +0.9 3,975,486 + ECD_03763 0.77 -0.0 3,975,486 + ECD_03763 0.77 -0.6 3,975,486 + ECD_03763 0.77 +0.6 3,975,487 - ECD_03763 0.77 +0.2 3,975,487 - ECD_03763 0.77 +0.3 3,975,487 - ECD_03763 0.77 -0.3 3,975,487 - ECD_03763 0.77 -0.2 3,975,487 - ECD_03763 0.77 +0.0 3,975,487 - ECD_03763 0.77 +0.0 3,975,487 - ECD_03763 0.77 -0.4 3,975,558 + ECD_03763 0.81 -0.4 3,975,583 - ECD_03763 0.82 -0.5 3,975,583 - ECD_03763 0.82 +0.6 3,975,587 - ECD_03763 0.82 -0.1 3,975,622 + ECD_03763 0.84 -0.9 3,975,651 - ECD_03763 0.86 +0.6 3,975,688 + ECD_03763 0.88 -0.7 3,975,731 + ECD_03763 0.90 +0.8 3,975,732 - ECD_03763 0.90 +0.1 3,975,789 - +0.7 3,975,800 - +0.3 3,975,998 + +0.1 3,976,056 + +0.2 3,976,122 + +0.1 3,976,125 + +0.3 3,976,167 - ECD_03764 0.11 +0.5 3,976,414 + ECD_03764 0.38 +1.6 3,976,445 - ECD_03764 0.41 +0.8 3,976,445 - ECD_03764 0.41 -0.3 3,976,461 + ECD_03764 0.43 +1.3 3,976,461 + ECD_03764 0.43 -0.9 3,976,462 - ECD_03764 0.43 -0.4 3,976,478 - ECD_03764 0.45 +0.8 3,976,607 - ECD_03764 0.59 -0.3 3,976,650 + ECD_03764 0.63 +0.7 3,976,709 + ECD_03764 0.70 +0.0 3,976,709 + ECD_03764 0.70 +0.1 3,976,709 + ECD_03764 0.70 +0.5 3,976,710 - ECD_03764 0.70 +0.0 3,976,710 - ECD_03764 0.70 +0.2 3,976,710 - ECD_03764 0.70 +0.6 3,976,732 + ECD_03764 0.72 +0.8 3,976,733 - ECD_03764 0.72 +0.1 3,976,842 + ECD_03764 0.84 +0.8 3,976,843 - ECD_03764 0.84 +0.9 3,976,964 + -0.0 3,976,964 + +0.2 3,976,964 + -0.4 3,976,965 - -0.0 3,976,965 - -1.2 3,976,965 - +0.0 3,976,965 - +0.0 3,976,976 + +0.2 3,976,977 - +0.5 3,976,977 - +0.2 3,976,977 - +0.1 3,976,980 + +0.6 3,976,988 + +0.4 3,976,988 + +0.4 3,976,988 + -0.3 3,976,988 + +0.4 3,976,988 + +1.0 3,976,989 - +0.3 3,976,989 - +0.2 3,976,989 - +0.2 3,976,989 - +0.9 3,977,103 + -0.4 3,977,113 + +0.3 3,977,113 + -0.4 3,977,114 - -0.6 3,977,199 + -0.4 3,977,200 - +0.7 3,977,200 - -1.6 3,977,200 - -0.0 3,977,204 - -0.8 3,977,239 + ECD_03765 0.11 -1.1 3,977,296 + ECD_03765 0.16 -0.1 3,977,296 + ECD_03765 0.16 +0.1 3,977,296 + ECD_03765 0.16 -0.4 3,977,296 + ECD_03765 0.16 -0.7 3,977,297 - ECD_03765 0.16 +0.2 3,977,297 - ECD_03765 0.16 +0.1 3,977,297 - ECD_03765 0.16 +0.1 3,977,297 - ECD_03765 0.16 +0.3 3,977,297 - ECD_03765 0.16 +0.4 3,977,305 - ECD_03765 0.16 +0.4 3,977,334 + ECD_03765 0.19 +0.6 3,977,358 + ECD_03765 0.21 -1.3 3,977,402 + ECD_03765 0.24 -1.0 3,977,443 + ECD_03765 0.27 -0.1 3,977,444 - ECD_03765 0.28 +0.1 3,977,444 - ECD_03765 0.28 +0.1 3,977,446 - ECD_03765 0.28 +0.6 3,977,579 + ECD_03765 0.38 +0.3 3,977,711 - ECD_03765 0.49 +0.3 3,977,791 - ECD_03765 0.55 -0.3
Or see this region's nucleotide sequence