Strain Fitness in Escherichia coli BL21 around ECD_03727

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03725 and ECD_03726 are separated by 94 nucleotidesECD_03726 and ECD_03727 are separated by 13 nucleotidesECD_03727 and ECD_03728 overlap by 4 nucleotides ECD_03725: ECD_03725 - DNA recombination protein, at 3,924,244 to 3,925,671 _03725 ECD_03726: ECD_03726 - bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase, at 3,925,766 to 3,926,521 _03726 ECD_03727: ECD_03727 - aerobic ubiquinone synthesis protein, SCP2 family protein, at 3,926,535 to 3,927,140 _03727 ECD_03728: ECD_03728 - regulator of octaprenylphenol hydroxylation, ubiquinone synthesis; regulator of 2'-N-acetyltransferase; putative ABC1 family protein kinase, at 3,927,137 to 3,928,777 _03728 Position (kb) 3926 3927 3928Strain fitness (log2 ratio) -1 0 1at 3925.592 kb on - strandat 3925.633 kb on + strandat 3925.633 kb on + strandat 3925.634 kb on - strandat 3925.634 kb on - strandat 3925.653 kb on + strandat 3925.653 kb on + strandat 3925.653 kb on + strandat 3925.654 kb on - strandat 3925.654 kb on - strandat 3925.654 kb on - strandat 3925.684 kb on - strandat 3926.512 kb on + strandat 3926.512 kb on + strandat 3926.512 kb on + strandat 3926.512 kb on + strandat 3926.641 kb on + strand, within ECD_03727at 3926.656 kb on + strand, within ECD_03727at 3926.710 kb on + strand, within ECD_03727at 3926.912 kb on + strand, within ECD_03727at 3927.032 kb on + strand, within ECD_03727

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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3,925,592 - +0.7
3,925,633 + +1.3
3,925,633 + +0.3
3,925,634 - -0.1
3,925,634 - +0.6
3,925,653 + -0.2
3,925,653 + -0.2
3,925,653 + +0.3
3,925,654 - +0.1
3,925,654 - +0.0
3,925,654 - +0.5
3,925,684 - -0.1
3,926,512 + +1.6
3,926,512 + -0.2
3,926,512 + +0.5
3,926,512 + -0.2
3,926,641 + ECD_03727 0.17 +1.3
3,926,656 + ECD_03727 0.20 +0.4
3,926,710 + ECD_03727 0.29 -0.8
3,926,912 + ECD_03727 0.62 +1.6
3,927,032 + ECD_03727 0.82 +0.8

Or see this region's nucleotide sequence