Strain Fitness in Escherichia coli BL21 around ECD_03693

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03692 and ECD_03693 are separated by 41 nucleotidesECD_03693 and ECD_03694 are separated by 65 nucleotides ECD_03692: ECD_03692 - magnesium/nickel/cobalt transporter, at 3,892,596 to 3,893,546 _03692 ECD_03693: ECD_03693 - hypothetical protein, at 3,893,588 to 3,894,010 _03693 ECD_03694: ECD_03694 - hypothetical protein, at 3,894,076 to 3,894,924 _03694 Position (kb) 3893 3894 3895Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3892.877 kb on + strand, within ECD_03692at 3892.877 kb on + strand, within ECD_03692at 3892.877 kb on + strand, within ECD_03692at 3892.877 kb on + strand, within ECD_03692at 3892.878 kb on - strand, within ECD_03692at 3892.878 kb on - strand, within ECD_03692at 3892.878 kb on - strand, within ECD_03692at 3892.902 kb on - strand, within ECD_03692at 3892.939 kb on - strand, within ECD_03692at 3892.939 kb on - strand, within ECD_03692at 3892.970 kb on - strand, within ECD_03692at 3893.045 kb on + strand, within ECD_03692at 3893.046 kb on - strand, within ECD_03692at 3893.046 kb on - strand, within ECD_03692at 3893.049 kb on + strand, within ECD_03692at 3893.049 kb on + strand, within ECD_03692at 3893.049 kb on + strand, within ECD_03692at 3893.049 kb on + strand, within ECD_03692at 3893.081 kb on + strand, within ECD_03692at 3893.081 kb on + strand, within ECD_03692at 3893.106 kb on + strand, within ECD_03692at 3893.106 kb on + strand, within ECD_03692at 3893.106 kb on + strand, within ECD_03692at 3893.107 kb on - strand, within ECD_03692at 3893.208 kb on - strand, within ECD_03692at 3893.336 kb on + strand, within ECD_03692at 3893.692 kb on + strand, within ECD_03693at 3893.983 kb on - strandat 3894.852 kb on - strandat 3894.944 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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3,892,877 + ECD_03692 0.30 -1.6
3,892,877 + ECD_03692 0.30 -1.6
3,892,877 + ECD_03692 0.30 -3.2
3,892,877 + ECD_03692 0.30 -2.1
3,892,878 - ECD_03692 0.30 +1.6
3,892,878 - ECD_03692 0.30 -0.2
3,892,878 - ECD_03692 0.30 -1.6
3,892,902 - ECD_03692 0.32 -3.8
3,892,939 - ECD_03692 0.36 -1.9
3,892,939 - ECD_03692 0.36 -0.7
3,892,970 - ECD_03692 0.39 -0.0
3,893,045 + ECD_03692 0.47 +1.6
3,893,046 - ECD_03692 0.47 -2.5
3,893,046 - ECD_03692 0.47 -1.3
3,893,049 + ECD_03692 0.48 -0.7
3,893,049 + ECD_03692 0.48 -1.1
3,893,049 + ECD_03692 0.48 -0.9
3,893,049 + ECD_03692 0.48 -1.0
3,893,081 + ECD_03692 0.51 -0.7
3,893,081 + ECD_03692 0.51 -0.7
3,893,106 + ECD_03692 0.54 -2.2
3,893,106 + ECD_03692 0.54 -1.4
3,893,106 + ECD_03692 0.54 -1.3
3,893,107 - ECD_03692 0.54 +0.6
3,893,208 - ECD_03692 0.64 -1.8
3,893,336 + ECD_03692 0.78 -0.7
3,893,692 + ECD_03693 0.25 +0.1
3,893,983 - -0.1
3,894,852 - +0.3
3,894,944 - +0.6

Or see this region's nucleotide sequence