Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03675 and ECD_03676 are separated by 157 nucleotides ECD_03676 and ECD_03677 are separated by 685 nucleotides
ECD_03675: ECD_03675 - putative AslA-specific sulfatase-maturating enzyme, at 3,873,198 to 3,874,433
_03675
ECD_03676: ECD_03676 - putative Ser-type periplasmic non-aryl sulfatase, at 3,874,591 to 3,876,246
_03676
ECD_03677: ECD_03677 - putative protoheme IX synthesis protein, at 3,876,932 to 3,878,128
_03677
Position (kb)
3874
3875
3876
3877 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3873.616 kb on - strand, within ECD_03675 at 3873.696 kb on + strand, within ECD_03675 at 3873.842 kb on + strand, within ECD_03675 at 3873.842 kb on + strand, within ECD_03675 at 3873.843 kb on - strand, within ECD_03675 at 3873.843 kb on - strand, within ECD_03675 at 3873.847 kb on + strand, within ECD_03675 at 3873.847 kb on + strand, within ECD_03675 at 3873.847 kb on + strand, within ECD_03675 at 3873.848 kb on - strand, within ECD_03675 at 3874.080 kb on + strand, within ECD_03675 at 3874.080 kb on + strand, within ECD_03675 at 3874.095 kb on + strand, within ECD_03675 at 3874.125 kb on - strand, within ECD_03675 at 3874.187 kb on + strand, within ECD_03675 at 3874.201 kb on + strand, within ECD_03675 at 3874.302 kb on + strand, within ECD_03675 at 3874.303 kb on - strand, within ECD_03675 at 3874.303 kb on - strand, within ECD_03675 at 3874.326 kb on + strand at 3874.339 kb on + strand at 3874.339 kb on + strand at 3874.340 kb on - strand at 3874.347 kb on + strand at 3874.347 kb on + strand at 3874.400 kb on + strand at 3874.428 kb on - strand at 3874.428 kb on - strand at 3874.602 kb on + strand at 3874.602 kb on + strand at 3874.642 kb on - strand at 3874.643 kb on + strand at 3874.643 kb on + strand at 3874.643 kb on + strand at 3874.643 kb on + strand at 3874.643 kb on + strand at 3874.643 kb on + strand at 3874.644 kb on - strand at 3874.724 kb on + strand at 3874.759 kb on + strand, within ECD_03676 at 3874.760 kb on - strand, within ECD_03676 at 3874.798 kb on - strand, within ECD_03676 at 3874.799 kb on + strand, within ECD_03676 at 3874.799 kb on + strand, within ECD_03676 at 3874.800 kb on - strand, within ECD_03676 at 3874.806 kb on - strand, within ECD_03676 at 3874.830 kb on - strand, within ECD_03676 at 3874.845 kb on + strand, within ECD_03676 at 3874.845 kb on + strand, within ECD_03676 at 3874.877 kb on + strand, within ECD_03676 at 3874.877 kb on + strand, within ECD_03676 at 3874.877 kb on + strand, within ECD_03676 at 3874.891 kb on - strand, within ECD_03676 at 3875.115 kb on + strand, within ECD_03676 at 3875.115 kb on + strand, within ECD_03676 at 3875.115 kb on + strand, within ECD_03676 at 3875.116 kb on - strand, within ECD_03676 at 3875.205 kb on + strand, within ECD_03676 at 3875.236 kb on - strand, within ECD_03676 at 3875.238 kb on - strand, within ECD_03676 at 3875.304 kb on + strand, within ECD_03676 at 3875.304 kb on + strand, within ECD_03676 at 3875.305 kb on - strand, within ECD_03676 at 3875.312 kb on + strand, within ECD_03676 at 3875.312 kb on + strand, within ECD_03676 at 3875.358 kb on - strand, within ECD_03676 at 3875.360 kb on + strand, within ECD_03676 at 3875.361 kb on - strand, within ECD_03676 at 3875.406 kb on + strand, within ECD_03676 at 3875.407 kb on - strand, within ECD_03676 at 3875.447 kb on + strand, within ECD_03676 at 3875.447 kb on + strand, within ECD_03676 at 3875.448 kb on - strand, within ECD_03676 at 3875.448 kb on - strand, within ECD_03676 at 3875.448 kb on - strand, within ECD_03676 at 3875.448 kb on - strand, within ECD_03676 at 3875.457 kb on + strand, within ECD_03676 at 3875.457 kb on + strand, within ECD_03676 at 3875.534 kb on + strand, within ECD_03676 at 3875.534 kb on + strand, within ECD_03676 at 3875.597 kb on + strand, within ECD_03676 at 3875.597 kb on + strand, within ECD_03676 at 3875.597 kb on + strand, within ECD_03676 at 3875.597 kb on + strand, within ECD_03676 at 3875.597 kb on + strand, within ECD_03676 at 3875.597 kb on + strand, within ECD_03676 at 3875.598 kb on - strand, within ECD_03676 at 3875.598 kb on - strand, within ECD_03676 at 3875.598 kb on - strand, within ECD_03676 at 3875.598 kb on - strand, within ECD_03676 at 3875.598 kb on - strand, within ECD_03676 at 3875.598 kb on - strand, within ECD_03676 at 3875.601 kb on + strand, within ECD_03676 at 3875.601 kb on + strand, within ECD_03676 at 3875.617 kb on - strand, within ECD_03676 at 3875.705 kb on + strand, within ECD_03676 at 3875.768 kb on + strand, within ECD_03676 at 3875.768 kb on + strand, within ECD_03676 at 3875.769 kb on - strand, within ECD_03676 at 3875.804 kb on + strand, within ECD_03676 at 3875.804 kb on + strand, within ECD_03676 at 3875.805 kb on - strand, within ECD_03676 at 3875.805 kb on - strand, within ECD_03676 at 3875.805 kb on - strand, within ECD_03676 at 3875.908 kb on - strand, within ECD_03676 at 3875.908 kb on - strand, within ECD_03676 at 3875.908 kb on - strand, within ECD_03676 at 3876.211 kb on + strand at 3876.212 kb on - strand at 3876.285 kb on + strand at 3876.289 kb on + strand at 3876.289 kb on + strand at 3876.306 kb on + strand at 3876.436 kb on - strand at 3876.499 kb on - strand at 3876.542 kb on + strand at 3876.544 kb on + strand at 3876.544 kb on + strand at 3876.544 kb on + strand at 3876.587 kb on + strand at 3876.611 kb on + strand at 3876.679 kb on + strand at 3876.699 kb on + strand at 3876.699 kb on + strand at 3876.756 kb on + strand at 3876.780 kb on + strand at 3876.780 kb on + strand at 3876.780 kb on + strand at 3876.836 kb on + strand at 3876.866 kb on + strand at 3876.867 kb on - strand at 3876.888 kb on + strand at 3876.933 kb on + strand at 3876.933 kb on + strand at 3876.934 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,873,616 - ECD_03675 0.34 +0.2 3,873,696 + ECD_03675 0.40 -0.1 3,873,842 + ECD_03675 0.52 -0.4 3,873,842 + ECD_03675 0.52 +0.6 3,873,843 - ECD_03675 0.52 +0.9 3,873,843 - ECD_03675 0.52 -0.2 3,873,847 + ECD_03675 0.53 +0.3 3,873,847 + ECD_03675 0.53 +0.1 3,873,847 + ECD_03675 0.53 -0.4 3,873,848 - ECD_03675 0.53 +0.6 3,874,080 + ECD_03675 0.71 -0.6 3,874,080 + ECD_03675 0.71 -0.5 3,874,095 + ECD_03675 0.73 -0.3 3,874,125 - ECD_03675 0.75 +0.2 3,874,187 + ECD_03675 0.80 +1.1 3,874,201 + ECD_03675 0.81 +0.5 3,874,302 + ECD_03675 0.89 +0.1 3,874,303 - ECD_03675 0.89 -1.3 3,874,303 - ECD_03675 0.89 -1.2 3,874,326 + +0.5 3,874,339 + -0.5 3,874,339 + -0.0 3,874,340 - -0.0 3,874,347 + +0.2 3,874,347 + +1.2 3,874,400 + -1.0 3,874,428 - -0.0 3,874,428 - -0.2 3,874,602 + +0.6 3,874,602 + +0.4 3,874,642 - +0.3 3,874,643 + +0.1 3,874,643 + +0.3 3,874,643 + +1.4 3,874,643 + -0.3 3,874,643 + +0.5 3,874,643 + +0.0 3,874,644 - +0.4 3,874,724 + +0.1 3,874,759 + ECD_03676 0.10 +0.1 3,874,760 - ECD_03676 0.10 +0.1 3,874,798 - ECD_03676 0.12 -1.5 3,874,799 + ECD_03676 0.13 -0.2 3,874,799 + ECD_03676 0.13 -0.8 3,874,800 - ECD_03676 0.13 +0.2 3,874,806 - ECD_03676 0.13 -0.7 3,874,830 - ECD_03676 0.14 -0.4 3,874,845 + ECD_03676 0.15 -0.0 3,874,845 + ECD_03676 0.15 -0.1 3,874,877 + ECD_03676 0.17 -0.2 3,874,877 + ECD_03676 0.17 -1.0 3,874,877 + ECD_03676 0.17 -0.2 3,874,891 - ECD_03676 0.18 +0.2 3,875,115 + ECD_03676 0.32 -0.2 3,875,115 + ECD_03676 0.32 +0.3 3,875,115 + ECD_03676 0.32 +0.4 3,875,116 - ECD_03676 0.32 +0.0 3,875,205 + ECD_03676 0.37 -0.4 3,875,236 - ECD_03676 0.39 +0.1 3,875,238 - ECD_03676 0.39 -1.3 3,875,304 + ECD_03676 0.43 +0.8 3,875,304 + ECD_03676 0.43 +0.1 3,875,305 - ECD_03676 0.43 -0.1 3,875,312 + ECD_03676 0.44 +0.6 3,875,312 + ECD_03676 0.44 +0.4 3,875,358 - ECD_03676 0.46 +0.3 3,875,360 + ECD_03676 0.46 +0.1 3,875,361 - ECD_03676 0.46 +0.1 3,875,406 + ECD_03676 0.49 +0.2 3,875,407 - ECD_03676 0.49 -0.4 3,875,447 + ECD_03676 0.52 -0.7 3,875,447 + ECD_03676 0.52 -0.7 3,875,448 - ECD_03676 0.52 -0.2 3,875,448 - ECD_03676 0.52 +1.6 3,875,448 - ECD_03676 0.52 +0.5 3,875,448 - ECD_03676 0.52 -0.2 3,875,457 + ECD_03676 0.52 +1.0 3,875,457 + ECD_03676 0.52 +1.1 3,875,534 + ECD_03676 0.57 -1.6 3,875,534 + ECD_03676 0.57 +0.0 3,875,597 + ECD_03676 0.61 +0.3 3,875,597 + ECD_03676 0.61 -1.9 3,875,597 + ECD_03676 0.61 +0.2 3,875,597 + ECD_03676 0.61 -0.8 3,875,597 + ECD_03676 0.61 -0.1 3,875,597 + ECD_03676 0.61 -0.0 3,875,598 - ECD_03676 0.61 -0.4 3,875,598 - ECD_03676 0.61 -1.2 3,875,598 - ECD_03676 0.61 -0.8 3,875,598 - ECD_03676 0.61 +0.9 3,875,598 - ECD_03676 0.61 +0.5 3,875,598 - ECD_03676 0.61 +0.9 3,875,601 + ECD_03676 0.61 -1.7 3,875,601 + ECD_03676 0.61 -0.1 3,875,617 - ECD_03676 0.62 -0.5 3,875,705 + ECD_03676 0.67 -0.3 3,875,768 + ECD_03676 0.71 -0.0 3,875,768 + ECD_03676 0.71 -1.0 3,875,769 - ECD_03676 0.71 -0.7 3,875,804 + ECD_03676 0.73 -0.1 3,875,804 + ECD_03676 0.73 +0.9 3,875,805 - ECD_03676 0.73 -0.0 3,875,805 - ECD_03676 0.73 -1.6 3,875,805 - ECD_03676 0.73 +0.9 3,875,908 - ECD_03676 0.80 +0.4 3,875,908 - ECD_03676 0.80 -0.3 3,875,908 - ECD_03676 0.80 -2.8 3,876,211 + +0.4 3,876,212 - +1.2 3,876,285 + -0.2 3,876,289 + -0.4 3,876,289 + +0.2 3,876,306 + +0.4 3,876,436 - +0.5 3,876,499 - -0.3 3,876,542 + +1.0 3,876,544 + +0.5 3,876,544 + +0.0 3,876,544 + -0.0 3,876,587 + +0.2 3,876,611 + -0.3 3,876,679 + +0.3 3,876,699 + +1.0 3,876,699 + -0.2 3,876,756 + +0.9 3,876,780 + +0.1 3,876,780 + -1.8 3,876,780 + -1.0 3,876,836 + -0.2 3,876,866 + -0.3 3,876,867 - -0.4 3,876,888 + -0.1 3,876,933 + +0.1 3,876,933 + -0.7 3,876,934 - +0.4
Or see this region's nucleotide sequence