Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03666 and ECD_03667 are separated by 18 nucleotides ECD_03667 and ECD_03668 overlap by 23 nucleotides ECD_03668 and ECD_03669 are separated by 4 nucleotides
ECD_03666: ECD_03666 - dTDP-glucose 4,6-dehydratase, at 3,862,762 to 3,863,829
_03666
ECD_03667: ECD_03667 - glucose-1-phosphate thymidylyltransferase, at 3,863,848 to 3,864,729
_03667
ECD_03668: ECD_03668 - TDP-fucosamine acetyltransferase, at 3,864,707 to 3,865,381
_03668
ECD_03669: ECD_03669 - TDP-4-oxo-6-deoxy-D-glucose transaminase, at 3,865,386 to 3,866,516
_03669
Position (kb)
3864
3865
3866 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3863.736 kb on + strand at 3863.736 kb on + strand at 3863.797 kb on + strand at 3863.813 kb on + strand at 3863.856 kb on + strand at 3863.856 kb on + strand at 3863.950 kb on + strand, within ECD_03667 at 3863.951 kb on - strand, within ECD_03667 at 3864.018 kb on + strand, within ECD_03667 at 3864.019 kb on - strand, within ECD_03667 at 3864.051 kb on + strand, within ECD_03667 at 3864.076 kb on + strand, within ECD_03667 at 3864.382 kb on - strand, within ECD_03667 at 3864.439 kb on - strand, within ECD_03667 at 3864.439 kb on - strand, within ECD_03667 at 3864.457 kb on + strand, within ECD_03667 at 3864.458 kb on - strand, within ECD_03667 at 3864.557 kb on + strand, within ECD_03667 at 3864.557 kb on + strand, within ECD_03667 at 3864.785 kb on - strand, within ECD_03668 at 3864.983 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.132 kb on - strand, within ECD_03668 at 3865.161 kb on - strand, within ECD_03668 at 3865.263 kb on - strand, within ECD_03668 at 3865.263 kb on - strand, within ECD_03668 at 3865.332 kb on + strand at 3865.332 kb on + strand at 3865.333 kb on - strand at 3865.333 kb on - strand at 3865.333 kb on - strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.433 kb on + strand at 3865.433 kb on + strand at 3865.434 kb on - strand at 3865.434 kb on - strand at 3865.434 kb on - strand at 3865.535 kb on - strand, within ECD_03669 at 3865.621 kb on - strand, within ECD_03669 at 3865.834 kb on + strand, within ECD_03669 at 3865.866 kb on + strand, within ECD_03669 at 3865.910 kb on + strand, within ECD_03669 at 3866.051 kb on + strand, within ECD_03669 at 3866.055 kb on + strand, within ECD_03669 at 3866.056 kb on - strand, within ECD_03669 at 3866.057 kb on + strand, within ECD_03669 at 3866.058 kb on - strand, within ECD_03669 at 3866.069 kb on + strand, within ECD_03669 at 3866.083 kb on - strand, within ECD_03669 at 3866.083 kb on - strand, within ECD_03669 at 3866.176 kb on - strand, within ECD_03669 at 3866.178 kb on + strand, within ECD_03669 at 3866.283 kb on - strand, within ECD_03669 at 3866.307 kb on - strand, within ECD_03669
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,863,736 + +0.2 3,863,736 + +0.1 3,863,797 + -1.5 3,863,813 + +0.6 3,863,856 + +0.8 3,863,856 + +0.5 3,863,950 + ECD_03667 0.12 +0.4 3,863,951 - ECD_03667 0.12 +0.3 3,864,018 + ECD_03667 0.19 +0.3 3,864,019 - ECD_03667 0.19 +2.0 3,864,051 + ECD_03667 0.23 -0.2 3,864,076 + ECD_03667 0.26 +0.7 3,864,382 - ECD_03667 0.61 -0.8 3,864,439 - ECD_03667 0.67 +1.1 3,864,439 - ECD_03667 0.67 +0.7 3,864,457 + ECD_03667 0.69 +0.1 3,864,458 - ECD_03667 0.69 +1.1 3,864,557 + ECD_03667 0.80 +0.3 3,864,557 + ECD_03667 0.80 +0.8 3,864,785 - ECD_03668 0.12 +0.7 3,864,983 - ECD_03668 0.41 +0.7 3,865,074 - ECD_03668 0.54 +0.8 3,865,074 - ECD_03668 0.54 +1.6 3,865,074 - ECD_03668 0.54 +0.5 3,865,074 - ECD_03668 0.54 +0.9 3,865,132 - ECD_03668 0.63 +0.8 3,865,161 - ECD_03668 0.67 +0.6 3,865,263 - ECD_03668 0.82 -0.8 3,865,263 - ECD_03668 0.82 +1.2 3,865,332 + -0.0 3,865,332 + +1.6 3,865,333 - +1.6 3,865,333 - -0.8 3,865,333 - +0.7 3,865,431 + +0.7 3,865,431 + +0.2 3,865,431 + -0.4 3,865,431 + +0.1 3,865,431 + -0.8 3,865,431 + +1.7 3,865,433 + +0.8 3,865,433 + +0.9 3,865,434 - -0.2 3,865,434 - -0.8 3,865,434 - +1.3 3,865,535 - ECD_03669 0.13 +0.6 3,865,621 - ECD_03669 0.21 +0.6 3,865,834 + ECD_03669 0.40 -0.7 3,865,866 + ECD_03669 0.42 +0.3 3,865,910 + ECD_03669 0.46 -0.3 3,866,051 + ECD_03669 0.59 +2.9 3,866,055 + ECD_03669 0.59 +1.2 3,866,056 - ECD_03669 0.59 +0.7 3,866,057 + ECD_03669 0.59 +0.6 3,866,058 - ECD_03669 0.59 +0.3 3,866,069 + ECD_03669 0.60 -1.8 3,866,083 - ECD_03669 0.62 +0.4 3,866,083 - ECD_03669 0.62 -0.2 3,866,176 - ECD_03669 0.70 +1.6 3,866,178 + ECD_03669 0.70 -0.8 3,866,283 - ECD_03669 0.79 +0.6 3,866,307 - ECD_03669 0.81 +0.1
Or see this region's nucleotide sequence