Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03666 and ECD_03667 are separated by 18 nucleotides ECD_03667 and ECD_03668 overlap by 23 nucleotides ECD_03668 and ECD_03669 are separated by 4 nucleotides
ECD_03666: ECD_03666 - dTDP-glucose 4,6-dehydratase, at 3,862,762 to 3,863,829
_03666
ECD_03667: ECD_03667 - glucose-1-phosphate thymidylyltransferase, at 3,863,848 to 3,864,729
_03667
ECD_03668: ECD_03668 - TDP-fucosamine acetyltransferase, at 3,864,707 to 3,865,381
_03668
ECD_03669: ECD_03669 - TDP-4-oxo-6-deoxy-D-glucose transaminase, at 3,865,386 to 3,866,516
_03669
Position (kb)
3863
3864
3865 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3862.871 kb on - strand, within ECD_03666 at 3863.077 kb on + strand, within ECD_03666 at 3863.077 kb on + strand, within ECD_03666 at 3863.078 kb on - strand, within ECD_03666 at 3863.079 kb on + strand, within ECD_03666 at 3863.079 kb on + strand, within ECD_03666 at 3863.079 kb on + strand, within ECD_03666 at 3863.079 kb on + strand, within ECD_03666 at 3863.080 kb on - strand, within ECD_03666 at 3863.080 kb on - strand, within ECD_03666 at 3863.080 kb on - strand, within ECD_03666 at 3863.104 kb on + strand, within ECD_03666 at 3863.154 kb on + strand, within ECD_03666 at 3863.154 kb on + strand, within ECD_03666 at 3863.154 kb on + strand, within ECD_03666 at 3863.154 kb on + strand, within ECD_03666 at 3863.154 kb on + strand, within ECD_03666 at 3863.155 kb on - strand, within ECD_03666 at 3863.171 kb on + strand, within ECD_03666 at 3863.171 kb on + strand, within ECD_03666 at 3863.171 kb on + strand, within ECD_03666 at 3863.171 kb on + strand, within ECD_03666 at 3863.171 kb on + strand, within ECD_03666 at 3863.172 kb on - strand, within ECD_03666 at 3863.173 kb on + strand, within ECD_03666 at 3863.173 kb on + strand, within ECD_03666 at 3863.173 kb on + strand, within ECD_03666 at 3863.174 kb on - strand, within ECD_03666 at 3863.239 kb on + strand, within ECD_03666 at 3863.293 kb on + strand, within ECD_03666 at 3863.294 kb on - strand, within ECD_03666 at 3863.310 kb on + strand, within ECD_03666 at 3863.311 kb on - strand, within ECD_03666 at 3863.329 kb on - strand, within ECD_03666 at 3863.332 kb on + strand, within ECD_03666 at 3863.332 kb on + strand, within ECD_03666 at 3863.332 kb on + strand, within ECD_03666 at 3863.332 kb on + strand, within ECD_03666 at 3863.332 kb on + strand, within ECD_03666 at 3863.333 kb on - strand, within ECD_03666 at 3863.408 kb on + strand, within ECD_03666 at 3863.408 kb on + strand, within ECD_03666 at 3863.408 kb on + strand, within ECD_03666 at 3863.408 kb on + strand, within ECD_03666 at 3863.410 kb on + strand, within ECD_03666 at 3863.443 kb on + strand, within ECD_03666 at 3863.443 kb on + strand, within ECD_03666 at 3863.444 kb on - strand, within ECD_03666 at 3863.470 kb on + strand, within ECD_03666 at 3863.471 kb on - strand, within ECD_03666 at 3863.507 kb on - strand, within ECD_03666 at 3863.508 kb on + strand, within ECD_03666 at 3863.508 kb on + strand, within ECD_03666 at 3863.511 kb on + strand, within ECD_03666 at 3863.511 kb on + strand, within ECD_03666 at 3863.512 kb on - strand, within ECD_03666 at 3863.512 kb on - strand, within ECD_03666 at 3863.512 kb on - strand, within ECD_03666 at 3863.532 kb on + strand, within ECD_03666 at 3863.612 kb on - strand, within ECD_03666 at 3863.612 kb on - strand, within ECD_03666 at 3863.612 kb on - strand, within ECD_03666 at 3863.613 kb on + strand, within ECD_03666 at 3863.614 kb on - strand, within ECD_03666 at 3863.736 kb on + strand at 3863.736 kb on + strand at 3863.797 kb on + strand at 3863.813 kb on + strand at 3863.856 kb on + strand at 3863.856 kb on + strand at 3863.950 kb on + strand, within ECD_03667 at 3863.951 kb on - strand, within ECD_03667 at 3864.018 kb on + strand, within ECD_03667 at 3864.019 kb on - strand, within ECD_03667 at 3864.051 kb on + strand, within ECD_03667 at 3864.076 kb on + strand, within ECD_03667 at 3864.382 kb on - strand, within ECD_03667 at 3864.439 kb on - strand, within ECD_03667 at 3864.439 kb on - strand, within ECD_03667 at 3864.457 kb on + strand, within ECD_03667 at 3864.458 kb on - strand, within ECD_03667 at 3864.557 kb on + strand, within ECD_03667 at 3864.557 kb on + strand, within ECD_03667 at 3864.785 kb on - strand, within ECD_03668 at 3864.983 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.074 kb on - strand, within ECD_03668 at 3865.132 kb on - strand, within ECD_03668 at 3865.161 kb on - strand, within ECD_03668 at 3865.263 kb on - strand, within ECD_03668 at 3865.263 kb on - strand, within ECD_03668 at 3865.332 kb on + strand at 3865.332 kb on + strand at 3865.333 kb on - strand at 3865.333 kb on - strand at 3865.333 kb on - strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.431 kb on + strand at 3865.433 kb on + strand at 3865.433 kb on + strand at 3865.434 kb on - strand at 3865.434 kb on - strand at 3865.434 kb on - strand at 3865.535 kb on - strand, within ECD_03669 at 3865.621 kb on - strand, within ECD_03669
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,862,871 - ECD_03666 0.10 +1.1 3,863,077 + ECD_03666 0.29 +0.7 3,863,077 + ECD_03666 0.29 -0.0 3,863,078 - ECD_03666 0.30 -0.1 3,863,079 + ECD_03666 0.30 +0.8 3,863,079 + ECD_03666 0.30 +0.8 3,863,079 + ECD_03666 0.30 +0.2 3,863,079 + ECD_03666 0.30 -0.0 3,863,080 - ECD_03666 0.30 +0.2 3,863,080 - ECD_03666 0.30 +0.1 3,863,080 - ECD_03666 0.30 -0.6 3,863,104 + ECD_03666 0.32 -0.7 3,863,154 + ECD_03666 0.37 +0.6 3,863,154 + ECD_03666 0.37 +1.6 3,863,154 + ECD_03666 0.37 +0.4 3,863,154 + ECD_03666 0.37 -0.1 3,863,154 + ECD_03666 0.37 +0.4 3,863,155 - ECD_03666 0.37 +0.4 3,863,171 + ECD_03666 0.38 +0.1 3,863,171 + ECD_03666 0.38 +0.5 3,863,171 + ECD_03666 0.38 +0.3 3,863,171 + ECD_03666 0.38 -0.3 3,863,171 + ECD_03666 0.38 +0.7 3,863,172 - ECD_03666 0.38 +0.3 3,863,173 + ECD_03666 0.38 +0.9 3,863,173 + ECD_03666 0.38 +0.5 3,863,173 + ECD_03666 0.38 -0.6 3,863,174 - ECD_03666 0.39 +0.1 3,863,239 + ECD_03666 0.45 -0.2 3,863,293 + ECD_03666 0.50 +0.4 3,863,294 - ECD_03666 0.50 +0.5 3,863,310 + ECD_03666 0.51 -0.0 3,863,311 - ECD_03666 0.51 +0.7 3,863,329 - ECD_03666 0.53 +0.7 3,863,332 + ECD_03666 0.53 +0.1 3,863,332 + ECD_03666 0.53 -0.9 3,863,332 + ECD_03666 0.53 +0.6 3,863,332 + ECD_03666 0.53 -0.5 3,863,332 + ECD_03666 0.53 +3.2 3,863,333 - ECD_03666 0.53 +2.2 3,863,408 + ECD_03666 0.60 +0.6 3,863,408 + ECD_03666 0.60 +0.5 3,863,408 + ECD_03666 0.60 +0.3 3,863,408 + ECD_03666 0.60 +0.2 3,863,410 + ECD_03666 0.61 +0.5 3,863,443 + ECD_03666 0.64 +0.2 3,863,443 + ECD_03666 0.64 -0.3 3,863,444 - ECD_03666 0.64 -0.4 3,863,470 + ECD_03666 0.66 -0.0 3,863,471 - ECD_03666 0.66 +0.9 3,863,507 - ECD_03666 0.70 +1.4 3,863,508 + ECD_03666 0.70 +0.2 3,863,508 + ECD_03666 0.70 +0.3 3,863,511 + ECD_03666 0.70 +0.2 3,863,511 + ECD_03666 0.70 -0.3 3,863,512 - ECD_03666 0.70 -0.8 3,863,512 - ECD_03666 0.70 +1.1 3,863,512 - ECD_03666 0.70 +0.8 3,863,532 + ECD_03666 0.72 -0.2 3,863,612 - ECD_03666 0.80 +0.4 3,863,612 - ECD_03666 0.80 +1.0 3,863,612 - ECD_03666 0.80 -0.1 3,863,613 + ECD_03666 0.80 +0.0 3,863,614 - ECD_03666 0.80 +0.5 3,863,736 + +0.2 3,863,736 + +0.1 3,863,797 + -1.5 3,863,813 + +0.6 3,863,856 + +0.8 3,863,856 + +0.5 3,863,950 + ECD_03667 0.12 +0.4 3,863,951 - ECD_03667 0.12 +0.3 3,864,018 + ECD_03667 0.19 +0.3 3,864,019 - ECD_03667 0.19 +2.0 3,864,051 + ECD_03667 0.23 -0.2 3,864,076 + ECD_03667 0.26 +0.7 3,864,382 - ECD_03667 0.61 -0.8 3,864,439 - ECD_03667 0.67 +1.1 3,864,439 - ECD_03667 0.67 +0.7 3,864,457 + ECD_03667 0.69 +0.1 3,864,458 - ECD_03667 0.69 +1.1 3,864,557 + ECD_03667 0.80 +0.3 3,864,557 + ECD_03667 0.80 +0.8 3,864,785 - ECD_03668 0.12 +0.7 3,864,983 - ECD_03668 0.41 +0.7 3,865,074 - ECD_03668 0.54 +0.8 3,865,074 - ECD_03668 0.54 +1.6 3,865,074 - ECD_03668 0.54 +0.5 3,865,074 - ECD_03668 0.54 +0.9 3,865,132 - ECD_03668 0.63 +0.8 3,865,161 - ECD_03668 0.67 +0.6 3,865,263 - ECD_03668 0.82 -0.8 3,865,263 - ECD_03668 0.82 +1.2 3,865,332 + -0.0 3,865,332 + +1.6 3,865,333 - +1.6 3,865,333 - -0.8 3,865,333 - +0.7 3,865,431 + +0.7 3,865,431 + +0.2 3,865,431 + -0.4 3,865,431 + +0.1 3,865,431 + -0.8 3,865,431 + +1.7 3,865,433 + +0.8 3,865,433 + +0.9 3,865,434 - -0.2 3,865,434 - -0.8 3,865,434 - +1.3 3,865,535 - ECD_03669 0.13 +0.6 3,865,621 - ECD_03669 0.21 +0.6
Or see this region's nucleotide sequence