Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03269 and ECD_03270 are separated by 611 nucleotides ECD_03270 and ECD_03271 are separated by 42 nucleotides
ECD_03269: ECD_03269 - maltodextrin phosphorylase, at 3,410,376 to 3,412,769
_03269
ECD_03270: ECD_03270 - mal regulon transcriptional activator, at 3,413,381 to 3,416,086
_03270
ECD_03271: ECD_03271 - RNA 3'-terminal phosphate cyclase, at 3,416,129 to 3,417,145
_03271
Position (kb)
3413
3414
3415
3416
3417 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3412.487 kb on - strand, within ECD_03269 at 3412.487 kb on - strand, within ECD_03269 at 3412.507 kb on - strand, within ECD_03269 at 3412.507 kb on - strand, within ECD_03269 at 3412.579 kb on + strand at 3412.579 kb on + strand at 3412.579 kb on + strand at 3412.580 kb on - strand at 3412.580 kb on - strand at 3412.584 kb on - strand at 3412.584 kb on - strand at 3412.698 kb on + strand at 3412.757 kb on + strand at 3412.769 kb on + strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.813 kb on - strand at 3412.858 kb on - strand at 3412.908 kb on + strand at 3412.908 kb on + strand at 3412.909 kb on - strand at 3412.952 kb on - strand at 3412.974 kb on - strand at 3412.974 kb on - strand at 3412.974 kb on - strand at 3413.116 kb on - strand at 3413.116 kb on - strand at 3413.156 kb on + strand at 3413.156 kb on + strand at 3413.188 kb on + strand at 3413.269 kb on - strand at 3413.314 kb on - strand at 3413.314 kb on - strand at 3413.315 kb on + strand at 3413.315 kb on + strand at 3413.327 kb on - strand at 3413.347 kb on + strand at 3413.347 kb on + strand at 3413.376 kb on + strand at 3413.376 kb on + strand at 3413.380 kb on + strand at 3413.381 kb on - strand at 3413.609 kb on + strand at 3413.610 kb on - strand at 3413.656 kb on - strand, within ECD_03270 at 3413.656 kb on - strand, within ECD_03270 at 3413.656 kb on - strand, within ECD_03270 at 3413.684 kb on + strand, within ECD_03270 at 3413.684 kb on + strand, within ECD_03270 at 3413.685 kb on - strand, within ECD_03270 at 3413.685 kb on - strand, within ECD_03270 at 3413.741 kb on - strand, within ECD_03270 at 3413.750 kb on + strand, within ECD_03270 at 3413.769 kb on - strand, within ECD_03270 at 3413.769 kb on - strand, within ECD_03270 at 3413.783 kb on - strand, within ECD_03270 at 3413.938 kb on + strand, within ECD_03270 at 3413.938 kb on + strand, within ECD_03270 at 3413.938 kb on + strand, within ECD_03270 at 3414.046 kb on - strand, within ECD_03270 at 3414.046 kb on - strand, within ECD_03270 at 3414.046 kb on - strand, within ECD_03270 at 3414.051 kb on + strand, within ECD_03270 at 3414.052 kb on - strand, within ECD_03270 at 3414.076 kb on + strand, within ECD_03270 at 3414.140 kb on + strand, within ECD_03270 at 3414.140 kb on + strand, within ECD_03270 at 3414.338 kb on + strand, within ECD_03270 at 3414.338 kb on + strand, within ECD_03270 at 3414.355 kb on + strand, within ECD_03270 at 3414.355 kb on + strand, within ECD_03270 at 3414.515 kb on - strand, within ECD_03270 at 3414.571 kb on + strand, within ECD_03270 at 3414.664 kb on + strand, within ECD_03270 at 3414.665 kb on - strand, within ECD_03270 at 3414.734 kb on - strand, within ECD_03270 at 3414.833 kb on + strand, within ECD_03270 at 3414.833 kb on + strand, within ECD_03270 at 3414.834 kb on - strand, within ECD_03270 at 3414.836 kb on - strand, within ECD_03270 at 3414.909 kb on + strand, within ECD_03270 at 3414.956 kb on + strand, within ECD_03270 at 3414.957 kb on - strand, within ECD_03270 at 3414.972 kb on + strand, within ECD_03270 at 3415.255 kb on - strand, within ECD_03270 at 3415.255 kb on - strand, within ECD_03270 at 3415.311 kb on - strand, within ECD_03270 at 3415.311 kb on - strand, within ECD_03270 at 3415.330 kb on + strand, within ECD_03270 at 3415.355 kb on + strand, within ECD_03270 at 3415.376 kb on - strand, within ECD_03270 at 3415.567 kb on + strand, within ECD_03270 at 3415.592 kb on + strand, within ECD_03270 at 3415.592 kb on + strand, within ECD_03270 at 3415.592 kb on + strand, within ECD_03270 at 3415.592 kb on + strand, within ECD_03270 at 3415.609 kb on + strand, within ECD_03270 at 3415.610 kb on - strand, within ECD_03270 at 3415.732 kb on + strand, within ECD_03270 at 3415.735 kb on + strand, within ECD_03270 at 3415.861 kb on - strand at 3415.908 kb on + strand at 3415.909 kb on - strand at 3415.922 kb on + strand at 3415.923 kb on - strand at 3415.932 kb on - strand at 3416.075 kb on + strand at 3416.075 kb on + strand at 3416.084 kb on + strand at 3416.085 kb on - strand at 3416.117 kb on + strand at 3416.117 kb on + strand at 3416.118 kb on - strand at 3416.118 kb on - strand at 3416.165 kb on + strand at 3416.246 kb on - strand, within ECD_03271 at 3416.246 kb on - strand, within ECD_03271 at 3416.298 kb on + strand, within ECD_03271 at 3416.299 kb on - strand, within ECD_03271 at 3416.299 kb on - strand, within ECD_03271 at 3416.444 kb on - strand, within ECD_03271 at 3416.555 kb on + strand, within ECD_03271 at 3416.555 kb on + strand, within ECD_03271 at 3416.555 kb on + strand, within ECD_03271 at 3416.555 kb on + strand, within ECD_03271 at 3416.556 kb on - strand, within ECD_03271 at 3416.558 kb on + strand, within ECD_03271 at 3416.559 kb on - strand, within ECD_03271 at 3416.559 kb on - strand, within ECD_03271 at 3416.559 kb on - strand, within ECD_03271 at 3416.614 kb on + strand, within ECD_03271 at 3416.615 kb on - strand, within ECD_03271 at 3416.667 kb on + strand, within ECD_03271 at 3416.851 kb on + strand, within ECD_03271 at 3416.852 kb on - strand, within ECD_03271 at 3416.852 kb on - strand, within ECD_03271 at 3417.046 kb on + strand at 3417.046 kb on + strand at 3417.046 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,412,487 - ECD_03269 0.88 -0.1 3,412,487 - ECD_03269 0.88 +0.3 3,412,507 - ECD_03269 0.89 +0.4 3,412,507 - ECD_03269 0.89 +0.3 3,412,579 + +0.2 3,412,579 + +0.1 3,412,579 + -0.3 3,412,580 - +1.1 3,412,580 - +0.4 3,412,584 - +0.2 3,412,584 - -0.0 3,412,698 + -0.3 3,412,757 + -0.0 3,412,769 + -0.4 3,412,770 - +0.2 3,412,770 - +0.4 3,412,770 - +0.6 3,412,770 - +0.1 3,412,770 - -0.2 3,412,813 - -0.4 3,412,858 - +0.5 3,412,908 + +0.9 3,412,908 + -0.9 3,412,909 - -0.5 3,412,952 - -0.2 3,412,974 - -0.3 3,412,974 - +0.8 3,412,974 - +0.5 3,413,116 - -0.5 3,413,116 - -0.0 3,413,156 + -0.3 3,413,156 + +0.2 3,413,188 + -2.2 3,413,269 - +0.9 3,413,314 - +0.5 3,413,314 - -0.4 3,413,315 + -0.1 3,413,315 + -1.5 3,413,327 - +0.1 3,413,347 + +0.1 3,413,347 + -0.4 3,413,376 + -0.1 3,413,376 + +0.0 3,413,380 + +1.2 3,413,381 - -0.1 3,413,609 + +0.2 3,413,610 - -0.9 3,413,656 - ECD_03270 0.10 +1.4 3,413,656 - ECD_03270 0.10 +0.4 3,413,656 - ECD_03270 0.10 +0.1 3,413,684 + ECD_03270 0.11 +1.0 3,413,684 + ECD_03270 0.11 +0.2 3,413,685 - ECD_03270 0.11 +0.3 3,413,685 - ECD_03270 0.11 +0.8 3,413,741 - ECD_03270 0.13 +0.8 3,413,750 + ECD_03270 0.14 +0.8 3,413,769 - ECD_03270 0.14 +0.3 3,413,769 - ECD_03270 0.14 -0.4 3,413,783 - ECD_03270 0.15 +1.2 3,413,938 + ECD_03270 0.21 +0.5 3,413,938 + ECD_03270 0.21 +0.7 3,413,938 + ECD_03270 0.21 +0.2 3,414,046 - ECD_03270 0.25 +0.2 3,414,046 - ECD_03270 0.25 +0.0 3,414,046 - ECD_03270 0.25 -0.3 3,414,051 + ECD_03270 0.25 +0.9 3,414,052 - ECD_03270 0.25 -0.1 3,414,076 + ECD_03270 0.26 -0.2 3,414,140 + ECD_03270 0.28 +0.6 3,414,140 + ECD_03270 0.28 -0.5 3,414,338 + ECD_03270 0.35 +0.7 3,414,338 + ECD_03270 0.35 +0.3 3,414,355 + ECD_03270 0.36 +0.7 3,414,355 + ECD_03270 0.36 +0.6 3,414,515 - ECD_03270 0.42 -0.6 3,414,571 + ECD_03270 0.44 +0.7 3,414,664 + ECD_03270 0.47 +0.9 3,414,665 - ECD_03270 0.47 +0.5 3,414,734 - ECD_03270 0.50 -0.1 3,414,833 + ECD_03270 0.54 -0.8 3,414,833 + ECD_03270 0.54 +0.7 3,414,834 - ECD_03270 0.54 +0.9 3,414,836 - ECD_03270 0.54 +0.9 3,414,909 + ECD_03270 0.56 +0.4 3,414,956 + ECD_03270 0.58 +0.3 3,414,957 - ECD_03270 0.58 +4.0 3,414,972 + ECD_03270 0.59 -0.2 3,415,255 - ECD_03270 0.69 +1.7 3,415,255 - ECD_03270 0.69 +0.8 3,415,311 - ECD_03270 0.71 +1.7 3,415,311 - ECD_03270 0.71 +0.8 3,415,330 + ECD_03270 0.72 +0.8 3,415,355 + ECD_03270 0.73 +0.3 3,415,376 - ECD_03270 0.74 +0.5 3,415,567 + ECD_03270 0.81 +0.9 3,415,592 + ECD_03270 0.82 +0.6 3,415,592 + ECD_03270 0.82 +0.9 3,415,592 + ECD_03270 0.82 -0.1 3,415,592 + ECD_03270 0.82 +1.3 3,415,609 + ECD_03270 0.82 +0.3 3,415,610 - ECD_03270 0.82 +0.6 3,415,732 + ECD_03270 0.87 +0.4 3,415,735 + ECD_03270 0.87 +1.1 3,415,861 - +0.2 3,415,908 + +0.3 3,415,909 - +0.2 3,415,922 + +0.6 3,415,923 - -0.5 3,415,932 - +0.8 3,416,075 + +0.7 3,416,075 + +0.7 3,416,084 + -0.7 3,416,085 - +1.3 3,416,117 + -0.2 3,416,117 + +0.5 3,416,118 - +0.9 3,416,118 - +0.3 3,416,165 + -0.3 3,416,246 - ECD_03271 0.12 -0.1 3,416,246 - ECD_03271 0.12 +0.1 3,416,298 + ECD_03271 0.17 +0.0 3,416,299 - ECD_03271 0.17 -0.7 3,416,299 - ECD_03271 0.17 -0.4 3,416,444 - ECD_03271 0.31 +0.4 3,416,555 + ECD_03271 0.42 +0.0 3,416,555 + ECD_03271 0.42 +0.7 3,416,555 + ECD_03271 0.42 -0.4 3,416,555 + ECD_03271 0.42 +0.5 3,416,556 - ECD_03271 0.42 +1.2 3,416,558 + ECD_03271 0.42 -0.3 3,416,559 - ECD_03271 0.42 -0.5 3,416,559 - ECD_03271 0.42 -0.2 3,416,559 - ECD_03271 0.42 +0.8 3,416,614 + ECD_03271 0.48 +0.1 3,416,615 - ECD_03271 0.48 +0.1 3,416,667 + ECD_03271 0.53 -0.1 3,416,851 + ECD_03271 0.71 +0.3 3,416,852 - ECD_03271 0.71 -1.2 3,416,852 - ECD_03271 0.71 +0.3 3,417,046 + +0.4 3,417,046 + -0.1 3,417,046 + +0.3
Or see this region's nucleotide sequence