Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03219 and ECD_03220 are separated by 246 nucleotides ECD_03220 and ECD_03221 are separated by 294 nucleotides
ECD_03219: ECD_03219 - fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase, at 3,357,429 to 3,358,802
_03219
ECD_03220: ECD_03220 - small lipoprotein, at 3,359,049 to 3,359,216
_03220
ECD_03221: ECD_03221 - putative fructoselysine transporter, at 3,359,511 to 3,360,848
_03221
Position (kb)
3359
3360 Strain fitness (log2 ratio)
-1
0
1 at 3358.419 kb on - strand, within ECD_03219 at 3358.569 kb on + strand, within ECD_03219 at 3358.569 kb on + strand, within ECD_03219 at 3358.570 kb on - strand, within ECD_03219 at 3358.746 kb on - strand at 3358.801 kb on - strand at 3359.108 kb on + strand, within ECD_03220 at 3359.108 kb on + strand, within ECD_03220 at 3359.282 kb on + strand at 3359.293 kb on - strand at 3359.332 kb on + strand at 3359.350 kb on + strand at 3359.479 kb on + strand at 3359.487 kb on - strand at 3359.487 kb on - strand at 3359.505 kb on - strand at 3359.599 kb on + strand at 3359.600 kb on - strand at 3359.642 kb on + strand at 3359.698 kb on - strand, within ECD_03221 at 3359.707 kb on + strand, within ECD_03221 at 3359.708 kb on - strand, within ECD_03221 at 3359.708 kb on - strand, within ECD_03221 at 3359.740 kb on - strand, within ECD_03221 at 3359.924 kb on + strand, within ECD_03221 at 3359.925 kb on - strand, within ECD_03221 at 3359.925 kb on - strand, within ECD_03221 at 3359.932 kb on + strand, within ECD_03221 at 3359.933 kb on - strand, within ECD_03221 at 3359.933 kb on - strand, within ECD_03221 at 3359.974 kb on + strand, within ECD_03221 at 3359.979 kb on - strand, within ECD_03221 at 3359.979 kb on - strand, within ECD_03221 at 3359.979 kb on - strand, within ECD_03221 at 3360.035 kb on + strand, within ECD_03221 at 3360.093 kb on - strand, within ECD_03221 at 3360.132 kb on + strand, within ECD_03221 at 3360.149 kb on + strand, within ECD_03221 at 3360.149 kb on + strand, within ECD_03221 at 3360.149 kb on + strand, within ECD_03221 at 3360.150 kb on - strand, within ECD_03221 at 3360.150 kb on - strand, within ECD_03221 at 3360.157 kb on - strand, within ECD_03221 at 3360.158 kb on + strand, within ECD_03221 at 3360.173 kb on + strand, within ECD_03221
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,358,419 - ECD_03219 0.72 -0.8 3,358,569 + ECD_03219 0.83 +0.5 3,358,569 + ECD_03219 0.83 -1.3 3,358,570 - ECD_03219 0.83 +1.4 3,358,746 - -0.8 3,358,801 - -0.2 3,359,108 + ECD_03220 0.35 -0.1 3,359,108 + ECD_03220 0.35 +0.9 3,359,282 + +0.7 3,359,293 - +0.1 3,359,332 + +0.6 3,359,350 + -0.7 3,359,479 + +0.4 3,359,487 - +0.2 3,359,487 - +0.9 3,359,505 - -1.0 3,359,599 + +0.2 3,359,600 - -0.1 3,359,642 + +0.9 3,359,698 - ECD_03221 0.14 -0.5 3,359,707 + ECD_03221 0.15 +0.1 3,359,708 - ECD_03221 0.15 +0.8 3,359,708 - ECD_03221 0.15 +0.4 3,359,740 - ECD_03221 0.17 +0.7 3,359,924 + ECD_03221 0.31 -0.1 3,359,925 - ECD_03221 0.31 -0.2 3,359,925 - ECD_03221 0.31 +0.0 3,359,932 + ECD_03221 0.31 +1.4 3,359,933 - ECD_03221 0.32 -0.3 3,359,933 - ECD_03221 0.32 -0.2 3,359,974 + ECD_03221 0.35 +0.1 3,359,979 - ECD_03221 0.35 -0.4 3,359,979 - ECD_03221 0.35 +0.3 3,359,979 - ECD_03221 0.35 +0.3 3,360,035 + ECD_03221 0.39 -0.6 3,360,093 - ECD_03221 0.43 +0.1 3,360,132 + ECD_03221 0.46 +0.7 3,360,149 + ECD_03221 0.48 -0.1 3,360,149 + ECD_03221 0.48 +0.1 3,360,149 + ECD_03221 0.48 +0.2 3,360,150 - ECD_03221 0.48 -0.2 3,360,150 - ECD_03221 0.48 -0.6 3,360,157 - ECD_03221 0.48 +0.5 3,360,158 + ECD_03221 0.48 -0.9 3,360,173 + ECD_03221 0.49 -0.9
Or see this region's nucleotide sequence