Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03185 and ECD_03186 overlap by 1 nucleotides ECD_03186 and ECD_03187 are separated by 28 nucleotides ECD_03187 and ECD_03188 are separated by 71 nucleotides ECD_03188 and ECD_03189 are separated by 168 nucleotides
ECD_03185: ECD_03185 - general secretory pathway component, cryptic, at 3,325,316 to 3,325,777
_03185
ECD_03186: ECD_03186 - bifunctional prepilin leader peptidase/ methylase, at 3,325,777 to 3,326,454
_03186
ECD_03187: ECD_03187 - bacterioferritin, iron storage and detoxification protein, at 3,326,483 to 3,326,959
_03187
ECD_03188: ECD_03188 - bacterioferritin-associated ferredoxin, at 3,327,031 to 3,327,225
_03188
ECD_03189: ECD_03189 - periplasmic endochitinase, at 3,327,394 to 3,329,454
_03189
Position (kb)
3326
3327 Strain fitness (log2 ratio)
-1
0
1
2 at 3325.552 kb on + strand, within ECD_03185 at 3325.553 kb on - strand, within ECD_03185 at 3325.616 kb on - strand, within ECD_03185 at 3325.688 kb on + strand, within ECD_03185 at 3325.689 kb on - strand, within ECD_03185 at 3325.689 kb on - strand, within ECD_03185 at 3325.689 kb on - strand, within ECD_03185 at 3325.689 kb on - strand, within ECD_03185 at 3325.776 kb on - strand at 3325.935 kb on + strand, within ECD_03186 at 3325.935 kb on + strand, within ECD_03186 at 3325.935 kb on + strand, within ECD_03186 at 3325.936 kb on - strand, within ECD_03186 at 3325.936 kb on - strand, within ECD_03186 at 3325.936 kb on - strand, within ECD_03186 at 3325.936 kb on - strand, within ECD_03186 at 3326.024 kb on - strand, within ECD_03186 at 3326.117 kb on + strand, within ECD_03186 at 3326.118 kb on - strand, within ECD_03186 at 3326.118 kb on - strand, within ECD_03186 at 3326.121 kb on + strand, within ECD_03186 at 3326.121 kb on + strand, within ECD_03186 at 3326.161 kb on + strand, within ECD_03186 at 3326.200 kb on + strand, within ECD_03186 at 3326.217 kb on - strand, within ECD_03186 at 3326.258 kb on + strand, within ECD_03186 at 3326.258 kb on + strand, within ECD_03186 at 3326.306 kb on + strand, within ECD_03186 at 3326.375 kb on + strand, within ECD_03186 at 3326.375 kb on + strand, within ECD_03186 at 3326.376 kb on - strand, within ECD_03186 at 3326.376 kb on - strand, within ECD_03186 at 3326.420 kb on + strand at 3326.421 kb on - strand at 3326.431 kb on + strand at 3326.450 kb on - strand at 3326.450 kb on - strand at 3326.597 kb on + strand, within ECD_03187 at 3326.598 kb on - strand, within ECD_03187 at 3326.748 kb on - strand, within ECD_03187 at 3326.785 kb on + strand, within ECD_03187 at 3326.785 kb on + strand, within ECD_03187 at 3326.785 kb on + strand, within ECD_03187 at 3326.786 kb on - strand, within ECD_03187 at 3326.827 kb on - strand, within ECD_03187 at 3326.827 kb on - strand, within ECD_03187 at 3326.944 kb on + strand at 3326.994 kb on - strand at 3326.994 kb on - strand at 3327.010 kb on - strand at 3327.010 kb on - strand at 3327.065 kb on - strand, within ECD_03188 at 3327.207 kb on + strand at 3327.208 kb on - strand at 3327.208 kb on - strand at 3327.221 kb on + strand at 3327.222 kb on - strand at 3327.222 kb on - strand at 3327.222 kb on - strand at 3327.222 kb on - strand at 3327.225 kb on + strand at 3327.226 kb on - strand at 3327.226 kb on - strand at 3327.395 kb on + strand at 3327.396 kb on - strand at 3327.403 kb on - strand at 3327.520 kb on - strand at 3327.520 kb on - strand at 3327.537 kb on + strand at 3327.537 kb on + strand at 3327.537 kb on + strand at 3327.538 kb on - strand at 3327.581 kb on + strand at 3327.581 kb on + strand at 3327.581 kb on + strand at 3327.582 kb on - strand at 3327.582 kb on - strand at 3327.582 kb on - strand at 3327.636 kb on + strand, within ECD_03189 at 3327.636 kb on + strand, within ECD_03189 at 3327.637 kb on - strand, within ECD_03189 at 3327.661 kb on - strand, within ECD_03189 at 3327.721 kb on - strand, within ECD_03189 at 3327.744 kb on + strand, within ECD_03189 at 3327.773 kb on + strand, within ECD_03189 at 3327.773 kb on + strand, within ECD_03189 at 3327.774 kb on - strand, within ECD_03189 at 3327.774 kb on - strand, within ECD_03189 at 3327.891 kb on + strand, within ECD_03189 at 3327.897 kb on + strand, within ECD_03189 at 3327.898 kb on - strand, within ECD_03189 at 3327.921 kb on + strand, within ECD_03189 at 3327.922 kb on - strand, within ECD_03189 at 3327.922 kb on - strand, within ECD_03189 at 3327.922 kb on - strand, within ECD_03189
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,325,552 + ECD_03185 0.51 +0.2 3,325,553 - ECD_03185 0.51 +0.5 3,325,616 - ECD_03185 0.65 -0.2 3,325,688 + ECD_03185 0.81 +0.0 3,325,689 - ECD_03185 0.81 +0.2 3,325,689 - ECD_03185 0.81 -0.4 3,325,689 - ECD_03185 0.81 +0.7 3,325,689 - ECD_03185 0.81 +0.2 3,325,776 - -0.0 3,325,935 + ECD_03186 0.23 +1.2 3,325,935 + ECD_03186 0.23 +0.6 3,325,935 + ECD_03186 0.23 +0.6 3,325,936 - ECD_03186 0.23 +0.5 3,325,936 - ECD_03186 0.23 +0.3 3,325,936 - ECD_03186 0.23 -0.2 3,325,936 - ECD_03186 0.23 +0.2 3,326,024 - ECD_03186 0.36 -0.2 3,326,117 + ECD_03186 0.50 -0.5 3,326,118 - ECD_03186 0.50 -0.1 3,326,118 - ECD_03186 0.50 -0.7 3,326,121 + ECD_03186 0.51 +0.2 3,326,121 + ECD_03186 0.51 -0.1 3,326,161 + ECD_03186 0.57 -0.1 3,326,200 + ECD_03186 0.62 -0.5 3,326,217 - ECD_03186 0.65 -0.0 3,326,258 + ECD_03186 0.71 +0.5 3,326,258 + ECD_03186 0.71 +0.2 3,326,306 + ECD_03186 0.78 -0.5 3,326,375 + ECD_03186 0.88 -0.0 3,326,375 + ECD_03186 0.88 +1.0 3,326,376 - ECD_03186 0.88 -0.6 3,326,376 - ECD_03186 0.88 +0.5 3,326,420 + -0.2 3,326,421 - +0.9 3,326,431 + -0.3 3,326,450 - -0.3 3,326,450 - +0.3 3,326,597 + ECD_03187 0.24 +1.1 3,326,598 - ECD_03187 0.24 +0.2 3,326,748 - ECD_03187 0.56 +0.3 3,326,785 + ECD_03187 0.63 +0.0 3,326,785 + ECD_03187 0.63 +0.1 3,326,785 + ECD_03187 0.63 +0.9 3,326,786 - ECD_03187 0.64 +1.5 3,326,827 - ECD_03187 0.72 -0.2 3,326,827 - ECD_03187 0.72 +0.6 3,326,944 + +0.1 3,326,994 - -0.2 3,326,994 - +0.1 3,327,010 - -0.2 3,327,010 - +1.0 3,327,065 - ECD_03188 0.17 +0.2 3,327,207 + -0.6 3,327,208 - +0.0 3,327,208 - +0.7 3,327,221 + +0.5 3,327,222 - +0.1 3,327,222 - +0.0 3,327,222 - +0.5 3,327,222 - -0.3 3,327,225 + -0.1 3,327,226 - -1.1 3,327,226 - +0.2 3,327,395 + -0.1 3,327,396 - -0.1 3,327,403 - +0.3 3,327,520 - +0.0 3,327,520 - +0.6 3,327,537 + +0.4 3,327,537 + +0.6 3,327,537 + -0.5 3,327,538 - +0.0 3,327,581 + +0.0 3,327,581 + +2.0 3,327,581 + +0.3 3,327,582 - +0.5 3,327,582 - -0.6 3,327,582 - +0.1 3,327,636 + ECD_03189 0.12 +1.2 3,327,636 + ECD_03189 0.12 -0.8 3,327,637 - ECD_03189 0.12 +1.8 3,327,661 - ECD_03189 0.13 +0.8 3,327,721 - ECD_03189 0.16 +0.4 3,327,744 + ECD_03189 0.17 -0.5 3,327,773 + ECD_03189 0.18 +0.4 3,327,773 + ECD_03189 0.18 +1.0 3,327,774 - ECD_03189 0.18 +0.2 3,327,774 - ECD_03189 0.18 +0.8 3,327,891 + ECD_03189 0.24 -0.7 3,327,897 + ECD_03189 0.24 +0.1 3,327,898 - ECD_03189 0.24 -0.2 3,327,921 + ECD_03189 0.26 +0.1 3,327,922 - ECD_03189 0.26 +0.1 3,327,922 - ECD_03189 0.26 +0.6 3,327,922 - ECD_03189 0.26 -0.4
Or see this region's nucleotide sequence