Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03095 and ECD_03096 are separated by 61 nucleotides ECD_03096 and ECD_03097 are separated by 434 nucleotides
ECD_03095: ECD_03095 - serine endoprotease, periplasmic, at 3,243,363 to 3,244,430
_03095
ECD_03096: ECD_03096 - malate dehydrogenase, NAD(P)-binding, at 3,244,492 to 3,245,430
_03096
ECD_03097: ECD_03097 - l-arginine-responsive arginine metabolism regulon transcriptional regulator, at 3,245,865 to 3,246,335
_03097
Position (kb)
3244
3245
3246 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3244.428 kb on + strand at 3244.428 kb on + strand at 3244.494 kb on - strand at 3244.494 kb on - strand at 3244.753 kb on - strand, within ECD_03096 at 3245.082 kb on + strand, within ECD_03096 at 3245.086 kb on - strand, within ECD_03096 at 3245.334 kb on - strand, within ECD_03096 at 3245.378 kb on - strand at 3245.378 kb on - strand at 3245.443 kb on - strand at 3245.446 kb on - strand at 3245.447 kb on + strand at 3245.488 kb on - strand at 3245.554 kb on + strand at 3245.555 kb on - strand at 3245.555 kb on - strand at 3245.562 kb on + strand at 3245.563 kb on - strand at 3245.563 kb on - strand at 3245.584 kb on - strand at 3245.584 kb on - strand at 3245.584 kb on - strand at 3245.588 kb on + strand at 3245.589 kb on - strand at 3245.592 kb on + strand at 3245.593 kb on - strand at 3245.608 kb on - strand at 3245.643 kb on + strand at 3245.643 kb on + strand at 3245.643 kb on + strand at 3245.643 kb on + strand at 3245.644 kb on - strand at 3245.644 kb on - strand at 3245.644 kb on - strand at 3245.644 kb on - strand at 3245.644 kb on - strand at 3245.644 kb on - strand at 3245.645 kb on + strand at 3245.645 kb on + strand at 3245.645 kb on + strand at 3245.645 kb on + strand at 3245.646 kb on - strand at 3245.646 kb on - strand at 3245.776 kb on + strand at 3245.832 kb on + strand at 3245.833 kb on - strand at 3245.840 kb on + strand at 3245.864 kb on + strand at 3245.865 kb on - strand at 3245.898 kb on - strand at 3245.898 kb on - strand at 3245.914 kb on + strand, within ECD_03097 at 3245.984 kb on + strand, within ECD_03097 at 3245.984 kb on + strand, within ECD_03097 at 3245.984 kb on + strand, within ECD_03097 at 3245.985 kb on - strand, within ECD_03097 at 3245.987 kb on + strand, within ECD_03097 at 3245.988 kb on - strand, within ECD_03097 at 3246.035 kb on + strand, within ECD_03097 at 3246.088 kb on + strand, within ECD_03097 at 3246.261 kb on - strand, within ECD_03097 at 3246.333 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,244,428 + -0.1 3,244,428 + -0.2 3,244,494 - -0.2 3,244,494 - +0.4 3,244,753 - ECD_03096 0.28 -0.1 3,245,082 + ECD_03096 0.63 -0.0 3,245,086 - ECD_03096 0.63 +0.7 3,245,334 - ECD_03096 0.90 +0.9 3,245,378 - +0.8 3,245,378 - +0.0 3,245,443 - +0.1 3,245,446 - +1.1 3,245,447 + +0.2 3,245,488 - -0.2 3,245,554 + +0.6 3,245,555 - +0.3 3,245,555 - +0.0 3,245,562 + -0.9 3,245,563 - +0.1 3,245,563 - +0.1 3,245,584 - +0.5 3,245,584 - +0.2 3,245,584 - +0.2 3,245,588 + +1.0 3,245,589 - -0.4 3,245,592 + -0.2 3,245,593 - -0.4 3,245,608 - +0.3 3,245,643 + -0.6 3,245,643 + -0.5 3,245,643 + -0.9 3,245,643 + +0.1 3,245,644 - +0.3 3,245,644 - +0.2 3,245,644 - +0.3 3,245,644 - +0.7 3,245,644 - -1.1 3,245,644 - +0.0 3,245,645 + -0.3 3,245,645 + -0.4 3,245,645 + -0.4 3,245,645 + -0.2 3,245,646 - +0.1 3,245,646 - -0.1 3,245,776 + +1.0 3,245,832 + +0.0 3,245,833 - +0.4 3,245,840 + +0.2 3,245,864 + -1.6 3,245,865 - +1.2 3,245,898 - +0.1 3,245,898 - -2.2 3,245,914 + ECD_03097 0.10 +0.3 3,245,984 + ECD_03097 0.25 +0.8 3,245,984 + ECD_03097 0.25 +0.4 3,245,984 + ECD_03097 0.25 -0.6 3,245,985 - ECD_03097 0.25 -0.3 3,245,987 + ECD_03097 0.26 +0.2 3,245,988 - ECD_03097 0.26 +1.0 3,246,035 + ECD_03097 0.36 -0.7 3,246,088 + ECD_03097 0.47 -1.3 3,246,261 - ECD_03097 0.84 +2.2 3,246,333 + +0.6
Or see this region's nucleotide sequence