Strain Fitness in Escherichia coli BL21 around ECD_02713

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02712 and ECD_02713 are separated by 50 nucleotidesECD_02713 and ECD_02714 overlap by 4 nucleotides ECD_02712: ECD_02712 - putative chlorohydrolase/aminohydrolase, at 2,850,022 to 2,851,350 _02712 ECD_02713: ECD_02713 - putative oxidoreductase, at 2,851,401 to 2,852,180 _02713 ECD_02714: ECD_02714 - putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding, at 2,852,177 to 2,855,047 _02714 Position (kb) 2851 2852 2853Strain fitness (log2 ratio) -2 -1 0 1 2at 2850.412 kb on + strand, within ECD_02712at 2850.413 kb on - strand, within ECD_02712at 2850.413 kb on - strand, within ECD_02712at 2850.413 kb on - strand, within ECD_02712at 2850.415 kb on - strand, within ECD_02712at 2850.531 kb on - strand, within ECD_02712at 2850.592 kb on + strand, within ECD_02712at 2850.592 kb on + strand, within ECD_02712at 2850.609 kb on + strand, within ECD_02712at 2850.609 kb on + strand, within ECD_02712at 2850.609 kb on + strand, within ECD_02712at 2850.609 kb on + strand, within ECD_02712at 2850.610 kb on - strand, within ECD_02712at 2850.696 kb on + strand, within ECD_02712at 2850.696 kb on + strand, within ECD_02712at 2850.697 kb on - strand, within ECD_02712at 2850.697 kb on - strand, within ECD_02712at 2850.697 kb on - strand, within ECD_02712at 2850.719 kb on - strand, within ECD_02712at 2850.731 kb on - strand, within ECD_02712at 2850.731 kb on - strand, within ECD_02712at 2850.820 kb on + strand, within ECD_02712at 2850.820 kb on + strand, within ECD_02712at 2850.820 kb on + strand, within ECD_02712at 2850.820 kb on + strand, within ECD_02712at 2850.820 kb on + strand, within ECD_02712at 2850.821 kb on - strand, within ECD_02712at 2850.821 kb on - strand, within ECD_02712at 2850.821 kb on - strand, within ECD_02712at 2850.821 kb on - strand, within ECD_02712at 2850.821 kb on - strand, within ECD_02712at 2850.821 kb on - strand, within ECD_02712at 2850.876 kb on + strand, within ECD_02712at 2850.910 kb on + strand, within ECD_02712at 2850.910 kb on + strand, within ECD_02712at 2850.911 kb on - strand, within ECD_02712at 2850.911 kb on - strand, within ECD_02712at 2851.066 kb on - strand, within ECD_02712at 2851.120 kb on + strand, within ECD_02712at 2851.121 kb on - strand, within ECD_02712at 2851.133 kb on + strand, within ECD_02712at 2851.147 kb on + strand, within ECD_02712at 2851.191 kb on + strand, within ECD_02712at 2851.252 kb on + strandat 2851.252 kb on + strandat 2851.252 kb on + strandat 2851.253 kb on - strandat 2851.253 kb on - strandat 2851.253 kb on - strandat 2851.253 kb on - strandat 2851.269 kb on + strandat 2851.270 kb on - strandat 2851.291 kb on + strandat 2851.291 kb on + strandat 2851.320 kb on + strandat 2851.320 kb on + strandat 2851.321 kb on - strandat 2851.348 kb on + strandat 2851.385 kb on + strandat 2851.386 kb on - strandat 2851.389 kb on + strandat 2851.389 kb on + strandat 2851.389 kb on + strandat 2851.390 kb on - strandat 2851.390 kb on - strandat 2851.508 kb on + strand, within ECD_02713at 2851.509 kb on - strand, within ECD_02713at 2851.509 kb on - strand, within ECD_02713at 2851.546 kb on + strand, within ECD_02713at 2851.695 kb on - strand, within ECD_02713at 2851.819 kb on - strand, within ECD_02713at 2851.819 kb on - strand, within ECD_02713at 2851.819 kb on - strand, within ECD_02713at 2851.961 kb on + strand, within ECD_02713at 2852.103 kb on + strandat 2852.103 kb on + strandat 2852.106 kb on - strandat 2852.112 kb on + strandat 2852.112 kb on + strandat 2852.112 kb on + strandat 2852.112 kb on + strandat 2852.112 kb on + strandat 2852.112 kb on + strandat 2852.114 kb on + strandat 2852.114 kb on + strandat 2852.114 kb on + strandat 2852.115 kb on - strandat 2852.176 kb on + strandat 2852.177 kb on - strandat 2852.191 kb on + strandat 2852.191 kb on + strandat 2852.192 kb on - strandat 2852.323 kb on - strandat 2852.335 kb on + strandat 2852.336 kb on - strandat 2852.359 kb on + strandat 2852.360 kb on - strandat 2852.360 kb on - strandat 2852.373 kb on + strandat 2852.373 kb on + strandat 2852.424 kb on + strandat 2852.475 kb on - strand, within ECD_02714at 2852.477 kb on - strand, within ECD_02714at 2852.597 kb on + strand, within ECD_02714at 2852.597 kb on + strand, within ECD_02714at 2852.598 kb on - strand, within ECD_02714at 2852.598 kb on - strand, within ECD_02714at 2852.598 kb on - strand, within ECD_02714at 2852.636 kb on - strand, within ECD_02714at 2852.695 kb on + strand, within ECD_02714at 2852.696 kb on - strand, within ECD_02714at 2852.747 kb on + strand, within ECD_02714at 2852.747 kb on + strand, within ECD_02714at 2852.747 kb on + strand, within ECD_02714at 2852.747 kb on + strand, within ECD_02714at 2852.748 kb on - strand, within ECD_02714at 2852.748 kb on - strand, within ECD_02714at 2852.748 kb on - strand, within ECD_02714at 2852.748 kb on - strand, within ECD_02714at 2852.793 kb on + strand, within ECD_02714at 2852.793 kb on + strand, within ECD_02714at 2852.821 kb on + strand, within ECD_02714at 2852.821 kb on + strand, within ECD_02714at 2852.873 kb on - strand, within ECD_02714at 2852.875 kb on + strand, within ECD_02714at 2852.875 kb on + strand, within ECD_02714at 2852.875 kb on + strand, within ECD_02714at 2852.876 kb on - strand, within ECD_02714at 2852.876 kb on - strand, within ECD_02714at 2852.876 kb on - strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.900 kb on + strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.901 kb on - strand, within ECD_02714at 2852.903 kb on + strand, within ECD_02714at 2852.903 kb on + strand, within ECD_02714at 2852.904 kb on - strand, within ECD_02714at 2852.904 kb on - strand, within ECD_02714at 2852.904 kb on - strand, within ECD_02714at 2852.904 kb on - strand, within ECD_02714at 2852.904 kb on - strand, within ECD_02714at 2852.906 kb on - strand, within ECD_02714at 2852.953 kb on + strand, within ECD_02714at 2852.953 kb on + strand, within ECD_02714at 2852.954 kb on - strand, within ECD_02714at 2852.954 kb on - strand, within ECD_02714at 2853.056 kb on + strand, within ECD_02714at 2853.068 kb on - strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.137 kb on + strand, within ECD_02714at 2853.138 kb on - strand, within ECD_02714at 2853.138 kb on - strand, within ECD_02714at 2853.138 kb on - strand, within ECD_02714at 2853.138 kb on - strand, within ECD_02714at 2853.138 kb on - strand, within ECD_02714at 2853.138 kb on - strand, within ECD_02714at 2853.138 kb on - strand, within ECD_02714at 2853.172 kb on + strand, within ECD_02714

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,850,412 + ECD_02712 0.29 +0.8
2,850,413 - ECD_02712 0.29 -0.0
2,850,413 - ECD_02712 0.29 -0.1
2,850,413 - ECD_02712 0.29 +0.2
2,850,415 - ECD_02712 0.30 -0.7
2,850,531 - ECD_02712 0.38 -1.2
2,850,592 + ECD_02712 0.43 +0.8
2,850,592 + ECD_02712 0.43 +0.1
2,850,609 + ECD_02712 0.44 -0.6
2,850,609 + ECD_02712 0.44 +0.1
2,850,609 + ECD_02712 0.44 -0.2
2,850,609 + ECD_02712 0.44 -0.5
2,850,610 - ECD_02712 0.44 -0.3
2,850,696 + ECD_02712 0.51 -0.3
2,850,696 + ECD_02712 0.51 -0.2
2,850,697 - ECD_02712 0.51 -0.8
2,850,697 - ECD_02712 0.51 +0.1
2,850,697 - ECD_02712 0.51 -0.8
2,850,719 - ECD_02712 0.52 -0.4
2,850,731 - ECD_02712 0.53 +0.2
2,850,731 - ECD_02712 0.53 +0.6
2,850,820 + ECD_02712 0.60 +1.2
2,850,820 + ECD_02712 0.60 -0.9
2,850,820 + ECD_02712 0.60 +1.1
2,850,820 + ECD_02712 0.60 -0.3
2,850,820 + ECD_02712 0.60 -1.6
2,850,821 - ECD_02712 0.60 -0.5
2,850,821 - ECD_02712 0.60 +0.8
2,850,821 - ECD_02712 0.60 -0.4
2,850,821 - ECD_02712 0.60 -1.1
2,850,821 - ECD_02712 0.60 -0.3
2,850,821 - ECD_02712 0.60 +0.4
2,850,876 + ECD_02712 0.64 +0.0
2,850,910 + ECD_02712 0.67 -0.0
2,850,910 + ECD_02712 0.67 -0.1
2,850,911 - ECD_02712 0.67 -0.2
2,850,911 - ECD_02712 0.67 -1.4
2,851,066 - ECD_02712 0.79 +0.4
2,851,120 + ECD_02712 0.83 +0.2
2,851,121 - ECD_02712 0.83 +1.9
2,851,133 + ECD_02712 0.84 +1.1
2,851,147 + ECD_02712 0.85 -0.2
2,851,191 + ECD_02712 0.88 +0.7
2,851,252 + +0.0
2,851,252 + +0.2
2,851,252 + +0.2
2,851,253 - -0.3
2,851,253 - +0.2
2,851,253 - +0.4
2,851,253 - -1.6
2,851,269 + -0.3
2,851,270 - +0.3
2,851,291 + -0.5
2,851,291 + +0.2
2,851,320 + -0.8
2,851,320 + +0.9
2,851,321 - +1.2
2,851,348 + -0.1
2,851,385 + +0.4
2,851,386 - -0.2
2,851,389 + +1.0
2,851,389 + +0.5
2,851,389 + -0.5
2,851,390 - -1.4
2,851,390 - -0.4
2,851,508 + ECD_02713 0.14 +2.0
2,851,509 - ECD_02713 0.14 -0.1
2,851,509 - ECD_02713 0.14 +1.7
2,851,546 + ECD_02713 0.19 +0.4
2,851,695 - ECD_02713 0.38 +1.1
2,851,819 - ECD_02713 0.54 -0.2
2,851,819 - ECD_02713 0.54 +2.1
2,851,819 - ECD_02713 0.54 +0.6
2,851,961 + ECD_02713 0.72 +0.9
2,852,103 + -1.3
2,852,103 + +1.1
2,852,106 - +0.1
2,852,112 + -0.0
2,852,112 + +1.2
2,852,112 + +0.1
2,852,112 + +0.7
2,852,112 + -0.8
2,852,112 + -0.7
2,852,114 + -1.6
2,852,114 + -0.1
2,852,114 + +0.8
2,852,115 - -0.0
2,852,176 + +0.3
2,852,177 - +0.5
2,852,191 + -0.8
2,852,191 + +0.3
2,852,192 - +1.0
2,852,323 - -0.2
2,852,335 + +0.5
2,852,336 - +0.7
2,852,359 + +0.0
2,852,360 - +0.8
2,852,360 - +0.4
2,852,373 + -0.5
2,852,373 + +0.6
2,852,424 + -0.1
2,852,475 - ECD_02714 0.10 +0.4
2,852,477 - ECD_02714 0.10 +0.4
2,852,597 + ECD_02714 0.15 +0.4
2,852,597 + ECD_02714 0.15 +0.5
2,852,598 - ECD_02714 0.15 -0.9
2,852,598 - ECD_02714 0.15 +0.2
2,852,598 - ECD_02714 0.15 +0.5
2,852,636 - ECD_02714 0.16 -1.5
2,852,695 + ECD_02714 0.18 -0.9
2,852,696 - ECD_02714 0.18 +1.0
2,852,747 + ECD_02714 0.20 -0.7
2,852,747 + ECD_02714 0.20 -1.4
2,852,747 + ECD_02714 0.20 -0.5
2,852,747 + ECD_02714 0.20 +0.6
2,852,748 - ECD_02714 0.20 +0.8
2,852,748 - ECD_02714 0.20 -0.5
2,852,748 - ECD_02714 0.20 -0.2
2,852,748 - ECD_02714 0.20 -0.2
2,852,793 + ECD_02714 0.21 -0.4
2,852,793 + ECD_02714 0.21 -0.0
2,852,821 + ECD_02714 0.22 -0.4
2,852,821 + ECD_02714 0.22 +0.6
2,852,873 - ECD_02714 0.24 -1.2
2,852,875 + ECD_02714 0.24 -0.0
2,852,875 + ECD_02714 0.24 +1.0
2,852,875 + ECD_02714 0.24 +0.7
2,852,876 - ECD_02714 0.24 +0.5
2,852,876 - ECD_02714 0.24 -0.5
2,852,876 - ECD_02714 0.24 +0.8
2,852,900 + ECD_02714 0.25 +0.6
2,852,900 + ECD_02714 0.25 -0.1
2,852,900 + ECD_02714 0.25 -0.4
2,852,900 + ECD_02714 0.25 -0.8
2,852,900 + ECD_02714 0.25 +0.2
2,852,900 + ECD_02714 0.25 -0.1
2,852,900 + ECD_02714 0.25 +0.2
2,852,900 + ECD_02714 0.25 +0.1
2,852,900 + ECD_02714 0.25 +0.7
2,852,900 + ECD_02714 0.25 -0.0
2,852,900 + ECD_02714 0.25 -2.3
2,852,900 + ECD_02714 0.25 +0.1
2,852,900 + ECD_02714 0.25 +0.1
2,852,900 + ECD_02714 0.25 -0.4
2,852,900 + ECD_02714 0.25 -0.3
2,852,901 - ECD_02714 0.25 +1.1
2,852,901 - ECD_02714 0.25 +0.0
2,852,901 - ECD_02714 0.25 -0.1
2,852,901 - ECD_02714 0.25 +1.2
2,852,901 - ECD_02714 0.25 -1.2
2,852,901 - ECD_02714 0.25 -0.9
2,852,901 - ECD_02714 0.25 +0.3
2,852,901 - ECD_02714 0.25 +0.2
2,852,901 - ECD_02714 0.25 -0.1
2,852,901 - ECD_02714 0.25 +0.4
2,852,903 + ECD_02714 0.25 -0.1
2,852,903 + ECD_02714 0.25 +0.6
2,852,904 - ECD_02714 0.25 -0.3
2,852,904 - ECD_02714 0.25 -0.3
2,852,904 - ECD_02714 0.25 -0.0
2,852,904 - ECD_02714 0.25 -0.3
2,852,904 - ECD_02714 0.25 +2.0
2,852,906 - ECD_02714 0.25 +0.4
2,852,953 + ECD_02714 0.27 -1.9
2,852,953 + ECD_02714 0.27 +0.2
2,852,954 - ECD_02714 0.27 -0.2
2,852,954 - ECD_02714 0.27 +0.4
2,853,056 + ECD_02714 0.31 +1.1
2,853,068 - ECD_02714 0.31 +0.2
2,853,137 + ECD_02714 0.33 -1.2
2,853,137 + ECD_02714 0.33 -0.4
2,853,137 + ECD_02714 0.33 -1.9
2,853,137 + ECD_02714 0.33 +0.6
2,853,137 + ECD_02714 0.33 -0.2
2,853,137 + ECD_02714 0.33 -0.6
2,853,137 + ECD_02714 0.33 -1.3
2,853,137 + ECD_02714 0.33 +0.7
2,853,137 + ECD_02714 0.33 +0.5
2,853,137 + ECD_02714 0.33 +0.1
2,853,137 + ECD_02714 0.33 +0.6
2,853,137 + ECD_02714 0.33 +0.4
2,853,137 + ECD_02714 0.33 +0.6
2,853,137 + ECD_02714 0.33 +0.5
2,853,138 - ECD_02714 0.33 +0.4
2,853,138 - ECD_02714 0.33 +1.0
2,853,138 - ECD_02714 0.33 +0.4
2,853,138 - ECD_02714 0.33 +0.1
2,853,138 - ECD_02714 0.33 +0.4
2,853,138 - ECD_02714 0.33 +1.6
2,853,138 - ECD_02714 0.33 -0.8
2,853,172 + ECD_02714 0.35 -0.8

Or see this region's nucleotide sequence