Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02708 and ECD_02709 are separated by 47 nucleotides ECD_02709 and ECD_02710 are separated by 102 nucleotides ECD_02710 and ECD_02711 are separated by 320 nucleotides
ECD_02708: ECD_02708 - XdhC-CoxI family protein with NAD(P)-binding Rossman fold, at 2,843,476 to 2,845,101
_02708
ECD_02709: ECD_02709 - putative selenium-dependent hydroxylase accessory protein, at 2,845,149 to 2,845,919
_02709
ECD_02710: ECD_02710 - CTP:molybdopterin cytidylyltransferase, at 2,846,022 to 2,846,600
_02710
ECD_02711: ECD_02711 - putative Fe-S subunit oxidoreductase subunit, at 2,846,921 to 2,850,019
_02711
Position (kb)
2846
2847 Strain fitness (log2 ratio)
-2
-1
0
1 at 2845.047 kb on + strand at 2845.095 kb on + strand at 2845.101 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.189 kb on - strand at 2845.189 kb on - strand at 2845.189 kb on - strand at 2845.190 kb on + strand at 2845.191 kb on - strand at 2845.212 kb on + strand at 2845.212 kb on + strand at 2845.212 kb on + strand at 2845.213 kb on - strand at 2845.400 kb on + strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.617 kb on - strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.680 kb on - strand, within ECD_02709 at 2845.680 kb on - strand, within ECD_02709 at 2845.745 kb on + strand, within ECD_02709 at 2845.751 kb on + strand, within ECD_02709 at 2845.751 kb on + strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.770 kb on + strand, within ECD_02709 at 2845.909 kb on - strand at 2845.959 kb on + strand at 2846.004 kb on - strand at 2846.006 kb on - strand at 2846.006 kb on - strand at 2846.039 kb on + strand at 2846.040 kb on - strand at 2846.040 kb on - strand at 2846.041 kb on + strand at 2846.226 kb on - strand, within ECD_02710 at 2846.257 kb on + strand, within ECD_02710 at 2846.509 kb on - strand, within ECD_02710 at 2846.630 kb on - strand at 2846.896 kb on - strand at 2846.901 kb on + strand at 2846.901 kb on + strand at 2846.901 kb on + strand at 2846.902 kb on - strand at 2846.902 kb on - strand at 2846.902 kb on - strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.904 kb on - strand at 2846.908 kb on + strand at 2846.929 kb on + strand at 2846.932 kb on + strand at 2846.933 kb on - strand at 2846.970 kb on + strand at 2846.971 kb on - strand at 2846.971 kb on - strand at 2847.125 kb on - strand at 2847.125 kb on - strand at 2847.125 kb on - strand at 2847.125 kb on - strand at 2847.166 kb on - strand at 2847.212 kb on - strand at 2847.212 kb on - strand at 2847.235 kb on + strand, within ECD_02711 at 2847.269 kb on - strand, within ECD_02711 at 2847.284 kb on + strand, within ECD_02711 at 2847.285 kb on - strand, within ECD_02711 at 2847.285 kb on - strand, within ECD_02711 at 2847.362 kb on - strand, within ECD_02711 at 2847.362 kb on - strand, within ECD_02711 at 2847.364 kb on + strand, within ECD_02711 at 2847.391 kb on + strand, within ECD_02711 at 2847.392 kb on - strand, within ECD_02711 at 2847.392 kb on - strand, within ECD_02711 at 2847.394 kb on + strand, within ECD_02711 at 2847.394 kb on + strand, within ECD_02711 at 2847.394 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.473 kb on - strand, within ECD_02711 at 2847.574 kb on + strand, within ECD_02711 at 2847.574 kb on + strand, within ECD_02711 at 2847.575 kb on - strand, within ECD_02711
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,845,047 + -0.0 2,845,095 + +0.1 2,845,101 + -1.2 2,845,188 + -0.1 2,845,188 + +0.1 2,845,188 + +0.4 2,845,188 + -0.0 2,845,188 + +0.3 2,845,189 - +0.3 2,845,189 - +0.2 2,845,189 - +0.0 2,845,190 + +1.4 2,845,191 - +1.1 2,845,212 + +0.4 2,845,212 + +0.1 2,845,212 + -1.8 2,845,213 - -0.8 2,845,400 + ECD_02709 0.33 +1.1 2,845,401 - ECD_02709 0.33 -0.1 2,845,401 - ECD_02709 0.33 -0.3 2,845,401 - ECD_02709 0.33 +0.0 2,845,401 - ECD_02709 0.33 -0.1 2,845,457 + ECD_02709 0.40 -0.2 2,845,457 + ECD_02709 0.40 -1.2 2,845,457 + ECD_02709 0.40 +0.8 2,845,458 - ECD_02709 0.40 -2.3 2,845,458 - ECD_02709 0.40 +0.1 2,845,458 - ECD_02709 0.40 +0.1 2,845,458 - ECD_02709 0.40 +0.1 2,845,458 - ECD_02709 0.40 +0.3 2,845,570 - ECD_02709 0.55 +0.7 2,845,570 - ECD_02709 0.55 -0.4 2,845,570 - ECD_02709 0.55 +0.0 2,845,570 - ECD_02709 0.55 -0.2 2,845,617 - ECD_02709 0.61 -0.2 2,845,679 + ECD_02709 0.69 -0.1 2,845,679 + ECD_02709 0.69 -0.3 2,845,679 + ECD_02709 0.69 +0.6 2,845,679 + ECD_02709 0.69 -1.0 2,845,679 + ECD_02709 0.69 +1.1 2,845,679 + ECD_02709 0.69 -0.5 2,845,679 + ECD_02709 0.69 +0.4 2,845,680 - ECD_02709 0.69 +0.2 2,845,680 - ECD_02709 0.69 +0.3 2,845,745 + ECD_02709 0.77 -0.7 2,845,751 + ECD_02709 0.78 +0.7 2,845,751 + ECD_02709 0.78 +1.2 2,845,752 - ECD_02709 0.78 -0.9 2,845,752 - ECD_02709 0.78 -0.2 2,845,752 - ECD_02709 0.78 -1.0 2,845,752 - ECD_02709 0.78 +0.6 2,845,752 - ECD_02709 0.78 -0.8 2,845,752 - ECD_02709 0.78 +0.6 2,845,752 - ECD_02709 0.78 -0.8 2,845,752 - ECD_02709 0.78 +0.2 2,845,752 - ECD_02709 0.78 -0.1 2,845,752 - ECD_02709 0.78 +0.3 2,845,752 - ECD_02709 0.78 -0.0 2,845,752 - ECD_02709 0.78 +0.2 2,845,752 - ECD_02709 0.78 +0.7 2,845,752 - ECD_02709 0.78 -1.0 2,845,752 - ECD_02709 0.78 +0.4 2,845,752 - ECD_02709 0.78 -1.2 2,845,770 + ECD_02709 0.81 -0.4 2,845,909 - +0.1 2,845,959 + -0.7 2,846,004 - -1.9 2,846,006 - -0.2 2,846,006 - +0.7 2,846,039 + +0.1 2,846,040 - +0.1 2,846,040 - -0.2 2,846,041 + +1.2 2,846,226 - ECD_02710 0.35 -0.0 2,846,257 + ECD_02710 0.41 +0.6 2,846,509 - ECD_02710 0.84 +1.2 2,846,630 - +0.2 2,846,896 - +0.0 2,846,901 + -0.9 2,846,901 + -0.2 2,846,901 + +0.8 2,846,902 - +0.3 2,846,902 - +0.2 2,846,902 - +0.6 2,846,903 + +1.0 2,846,903 + +0.1 2,846,903 + -1.7 2,846,903 + -0.3 2,846,903 + +0.4 2,846,904 - +0.4 2,846,908 + +0.4 2,846,929 + +0.4 2,846,932 + -1.1 2,846,933 - -0.1 2,846,970 + -0.5 2,846,971 - -0.3 2,846,971 - +0.7 2,847,125 - +1.0 2,847,125 - +0.2 2,847,125 - +0.3 2,847,125 - +0.4 2,847,166 - +0.7 2,847,212 - +0.3 2,847,212 - +0.3 2,847,235 + ECD_02711 0.10 -0.0 2,847,269 - ECD_02711 0.11 +0.4 2,847,284 + ECD_02711 0.12 +0.6 2,847,285 - ECD_02711 0.12 +0.5 2,847,285 - ECD_02711 0.12 -0.9 2,847,362 - ECD_02711 0.14 +0.1 2,847,362 - ECD_02711 0.14 -0.5 2,847,364 + ECD_02711 0.14 +1.3 2,847,391 + ECD_02711 0.15 +1.7 2,847,392 - ECD_02711 0.15 +0.6 2,847,392 - ECD_02711 0.15 +0.1 2,847,394 + ECD_02711 0.15 +0.0 2,847,394 + ECD_02711 0.15 +0.6 2,847,394 + ECD_02711 0.15 -0.1 2,847,427 + ECD_02711 0.16 -0.7 2,847,427 + ECD_02711 0.16 -0.6 2,847,427 + ECD_02711 0.16 -0.3 2,847,427 + ECD_02711 0.16 -0.9 2,847,427 + ECD_02711 0.16 -0.3 2,847,427 + ECD_02711 0.16 +0.4 2,847,428 - ECD_02711 0.16 +0.9 2,847,428 - ECD_02711 0.16 -0.1 2,847,428 - ECD_02711 0.16 +0.2 2,847,428 - ECD_02711 0.16 +0.7 2,847,473 - ECD_02711 0.18 +0.1 2,847,574 + ECD_02711 0.21 -1.0 2,847,574 + ECD_02711 0.21 -0.2 2,847,575 - ECD_02711 0.21 -0.5
Or see this region's nucleotide sequence