Strain Fitness in Escherichia coli BL21 around ECD_02710

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02708 and ECD_02709 are separated by 47 nucleotidesECD_02709 and ECD_02710 are separated by 102 nucleotidesECD_02710 and ECD_02711 are separated by 320 nucleotides ECD_02708: ECD_02708 - XdhC-CoxI family protein with NAD(P)-binding Rossman fold, at 2,843,476 to 2,845,101 _02708 ECD_02709: ECD_02709 - putative selenium-dependent hydroxylase accessory protein, at 2,845,149 to 2,845,919 _02709 ECD_02710: ECD_02710 - CTP:molybdopterin cytidylyltransferase, at 2,846,022 to 2,846,600 _02710 ECD_02711: ECD_02711 - putative Fe-S subunit oxidoreductase subunit, at 2,846,921 to 2,850,019 _02711 Position (kb) 2846 2847Strain fitness (log2 ratio) -2 -1 0 1at 2845.047 kb on + strandat 2845.095 kb on + strandat 2845.101 kb on + strandat 2845.188 kb on + strandat 2845.188 kb on + strandat 2845.188 kb on + strandat 2845.188 kb on + strandat 2845.188 kb on + strandat 2845.189 kb on - strandat 2845.189 kb on - strandat 2845.189 kb on - strandat 2845.190 kb on + strandat 2845.191 kb on - strandat 2845.212 kb on + strandat 2845.212 kb on + strandat 2845.212 kb on + strandat 2845.213 kb on - strandat 2845.400 kb on + strand, within ECD_02709at 2845.401 kb on - strand, within ECD_02709at 2845.401 kb on - strand, within ECD_02709at 2845.401 kb on - strand, within ECD_02709at 2845.401 kb on - strand, within ECD_02709at 2845.457 kb on + strand, within ECD_02709at 2845.457 kb on + strand, within ECD_02709at 2845.457 kb on + strand, within ECD_02709at 2845.458 kb on - strand, within ECD_02709at 2845.458 kb on - strand, within ECD_02709at 2845.458 kb on - strand, within ECD_02709at 2845.458 kb on - strand, within ECD_02709at 2845.458 kb on - strand, within ECD_02709at 2845.570 kb on - strand, within ECD_02709at 2845.570 kb on - strand, within ECD_02709at 2845.570 kb on - strand, within ECD_02709at 2845.570 kb on - strand, within ECD_02709at 2845.617 kb on - strand, within ECD_02709at 2845.679 kb on + strand, within ECD_02709at 2845.679 kb on + strand, within ECD_02709at 2845.679 kb on + strand, within ECD_02709at 2845.679 kb on + strand, within ECD_02709at 2845.679 kb on + strand, within ECD_02709at 2845.679 kb on + strand, within ECD_02709at 2845.679 kb on + strand, within ECD_02709at 2845.680 kb on - strand, within ECD_02709at 2845.680 kb on - strand, within ECD_02709at 2845.745 kb on + strand, within ECD_02709at 2845.751 kb on + strand, within ECD_02709at 2845.751 kb on + strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.752 kb on - strand, within ECD_02709at 2845.770 kb on + strand, within ECD_02709at 2845.909 kb on - strandat 2845.959 kb on + strandat 2846.004 kb on - strandat 2846.006 kb on - strandat 2846.006 kb on - strandat 2846.039 kb on + strandat 2846.040 kb on - strandat 2846.040 kb on - strandat 2846.041 kb on + strandat 2846.226 kb on - strand, within ECD_02710at 2846.257 kb on + strand, within ECD_02710at 2846.509 kb on - strand, within ECD_02710at 2846.630 kb on - strandat 2846.896 kb on - strandat 2846.901 kb on + strandat 2846.901 kb on + strandat 2846.901 kb on + strandat 2846.902 kb on - strandat 2846.902 kb on - strandat 2846.902 kb on - strandat 2846.903 kb on + strandat 2846.903 kb on + strandat 2846.903 kb on + strandat 2846.903 kb on + strandat 2846.903 kb on + strandat 2846.904 kb on - strandat 2846.908 kb on + strandat 2846.929 kb on + strandat 2846.932 kb on + strandat 2846.933 kb on - strandat 2846.970 kb on + strandat 2846.971 kb on - strandat 2846.971 kb on - strandat 2847.125 kb on - strandat 2847.125 kb on - strandat 2847.125 kb on - strandat 2847.125 kb on - strandat 2847.166 kb on - strandat 2847.212 kb on - strandat 2847.212 kb on - strandat 2847.235 kb on + strand, within ECD_02711at 2847.269 kb on - strand, within ECD_02711at 2847.284 kb on + strand, within ECD_02711at 2847.285 kb on - strand, within ECD_02711at 2847.285 kb on - strand, within ECD_02711at 2847.362 kb on - strand, within ECD_02711at 2847.362 kb on - strand, within ECD_02711at 2847.364 kb on + strand, within ECD_02711at 2847.391 kb on + strand, within ECD_02711at 2847.392 kb on - strand, within ECD_02711at 2847.392 kb on - strand, within ECD_02711at 2847.394 kb on + strand, within ECD_02711at 2847.394 kb on + strand, within ECD_02711at 2847.394 kb on + strand, within ECD_02711at 2847.427 kb on + strand, within ECD_02711at 2847.427 kb on + strand, within ECD_02711at 2847.427 kb on + strand, within ECD_02711at 2847.427 kb on + strand, within ECD_02711at 2847.427 kb on + strand, within ECD_02711at 2847.427 kb on + strand, within ECD_02711at 2847.428 kb on - strand, within ECD_02711at 2847.428 kb on - strand, within ECD_02711at 2847.428 kb on - strand, within ECD_02711at 2847.428 kb on - strand, within ECD_02711at 2847.473 kb on - strand, within ECD_02711at 2847.574 kb on + strand, within ECD_02711at 2847.574 kb on + strand, within ECD_02711at 2847.575 kb on - strand, within ECD_02711

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,845,047 + -0.0
2,845,095 + +0.1
2,845,101 + -1.2
2,845,188 + -0.1
2,845,188 + +0.1
2,845,188 + +0.4
2,845,188 + -0.0
2,845,188 + +0.3
2,845,189 - +0.3
2,845,189 - +0.2
2,845,189 - +0.0
2,845,190 + +1.4
2,845,191 - +1.1
2,845,212 + +0.4
2,845,212 + +0.1
2,845,212 + -1.8
2,845,213 - -0.8
2,845,400 + ECD_02709 0.33 +1.1
2,845,401 - ECD_02709 0.33 -0.1
2,845,401 - ECD_02709 0.33 -0.3
2,845,401 - ECD_02709 0.33 +0.0
2,845,401 - ECD_02709 0.33 -0.1
2,845,457 + ECD_02709 0.40 -0.2
2,845,457 + ECD_02709 0.40 -1.2
2,845,457 + ECD_02709 0.40 +0.8
2,845,458 - ECD_02709 0.40 -2.3
2,845,458 - ECD_02709 0.40 +0.1
2,845,458 - ECD_02709 0.40 +0.1
2,845,458 - ECD_02709 0.40 +0.1
2,845,458 - ECD_02709 0.40 +0.3
2,845,570 - ECD_02709 0.55 +0.7
2,845,570 - ECD_02709 0.55 -0.4
2,845,570 - ECD_02709 0.55 +0.0
2,845,570 - ECD_02709 0.55 -0.2
2,845,617 - ECD_02709 0.61 -0.2
2,845,679 + ECD_02709 0.69 -0.1
2,845,679 + ECD_02709 0.69 -0.3
2,845,679 + ECD_02709 0.69 +0.6
2,845,679 + ECD_02709 0.69 -1.0
2,845,679 + ECD_02709 0.69 +1.1
2,845,679 + ECD_02709 0.69 -0.5
2,845,679 + ECD_02709 0.69 +0.4
2,845,680 - ECD_02709 0.69 +0.2
2,845,680 - ECD_02709 0.69 +0.3
2,845,745 + ECD_02709 0.77 -0.7
2,845,751 + ECD_02709 0.78 +0.7
2,845,751 + ECD_02709 0.78 +1.2
2,845,752 - ECD_02709 0.78 -0.9
2,845,752 - ECD_02709 0.78 -0.2
2,845,752 - ECD_02709 0.78 -1.0
2,845,752 - ECD_02709 0.78 +0.6
2,845,752 - ECD_02709 0.78 -0.8
2,845,752 - ECD_02709 0.78 +0.6
2,845,752 - ECD_02709 0.78 -0.8
2,845,752 - ECD_02709 0.78 +0.2
2,845,752 - ECD_02709 0.78 -0.1
2,845,752 - ECD_02709 0.78 +0.3
2,845,752 - ECD_02709 0.78 -0.0
2,845,752 - ECD_02709 0.78 +0.2
2,845,752 - ECD_02709 0.78 +0.7
2,845,752 - ECD_02709 0.78 -1.0
2,845,752 - ECD_02709 0.78 +0.4
2,845,752 - ECD_02709 0.78 -1.2
2,845,770 + ECD_02709 0.81 -0.4
2,845,909 - +0.1
2,845,959 + -0.7
2,846,004 - -1.9
2,846,006 - -0.2
2,846,006 - +0.7
2,846,039 + +0.1
2,846,040 - +0.1
2,846,040 - -0.2
2,846,041 + +1.2
2,846,226 - ECD_02710 0.35 -0.0
2,846,257 + ECD_02710 0.41 +0.6
2,846,509 - ECD_02710 0.84 +1.2
2,846,630 - +0.2
2,846,896 - +0.0
2,846,901 + -0.9
2,846,901 + -0.2
2,846,901 + +0.8
2,846,902 - +0.3
2,846,902 - +0.2
2,846,902 - +0.6
2,846,903 + +1.0
2,846,903 + +0.1
2,846,903 + -1.7
2,846,903 + -0.3
2,846,903 + +0.4
2,846,904 - +0.4
2,846,908 + +0.4
2,846,929 + +0.4
2,846,932 + -1.1
2,846,933 - -0.1
2,846,970 + -0.5
2,846,971 - -0.3
2,846,971 - +0.7
2,847,125 - +1.0
2,847,125 - +0.2
2,847,125 - +0.3
2,847,125 - +0.4
2,847,166 - +0.7
2,847,212 - +0.3
2,847,212 - +0.3
2,847,235 + ECD_02711 0.10 -0.0
2,847,269 - ECD_02711 0.11 +0.4
2,847,284 + ECD_02711 0.12 +0.6
2,847,285 - ECD_02711 0.12 +0.5
2,847,285 - ECD_02711 0.12 -0.9
2,847,362 - ECD_02711 0.14 +0.1
2,847,362 - ECD_02711 0.14 -0.5
2,847,364 + ECD_02711 0.14 +1.3
2,847,391 + ECD_02711 0.15 +1.7
2,847,392 - ECD_02711 0.15 +0.6
2,847,392 - ECD_02711 0.15 +0.1
2,847,394 + ECD_02711 0.15 +0.0
2,847,394 + ECD_02711 0.15 +0.6
2,847,394 + ECD_02711 0.15 -0.1
2,847,427 + ECD_02711 0.16 -0.7
2,847,427 + ECD_02711 0.16 -0.6
2,847,427 + ECD_02711 0.16 -0.3
2,847,427 + ECD_02711 0.16 -0.9
2,847,427 + ECD_02711 0.16 -0.3
2,847,427 + ECD_02711 0.16 +0.4
2,847,428 - ECD_02711 0.16 +0.9
2,847,428 - ECD_02711 0.16 -0.1
2,847,428 - ECD_02711 0.16 +0.2
2,847,428 - ECD_02711 0.16 +0.7
2,847,473 - ECD_02711 0.18 +0.1
2,847,574 + ECD_02711 0.21 -1.0
2,847,574 + ECD_02711 0.21 -0.2
2,847,575 - ECD_02711 0.21 -0.5

Or see this region's nucleotide sequence