Strain Fitness in Escherichia coli BL21 around ECD_02670

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02669 and ECD_02670 are separated by 175 nucleotidesECD_02670 and ECD_02671 are separated by 12 nucleotidesECD_02671 and ECD_02672 overlap by 16 nucleotidesECD_02672 and ECD_02673 overlap by 4 nucleotides ECD_02669: ECD_02669 - protease III, at 2,794,276 to 2,797,164 _02669 ECD_02670: ECD_02670 - exonuclease V (RecBCD complex), gamma chain, at 2,797,340 to 2,800,708 _02670 ECD_02671: ECD_02671 - putative prepilin peptidase-dependent protein, at 2,800,721 to 2,801,044 _02671 ECD_02672: ECD_02672 - DUF2509 family protein, at 2,801,029 to 2,801,436 _02672 ECD_02673: ECD_02673 - putative prepilin peptidase-dependent protein, at 2,801,433 to 2,801,996 _02673 Position (kb) 2797 2798 2799 2800 2801Strain fitness (log2 ratio) -2 -1 0 1at 2796.450 kb on + strand, within ECD_02669at 2796.451 kb on - strand, within ECD_02669at 2796.451 kb on - strand, within ECD_02669at 2796.453 kb on + strand, within ECD_02669at 2796.458 kb on + strand, within ECD_02669at 2796.459 kb on - strand, within ECD_02669at 2796.463 kb on - strand, within ECD_02669at 2796.489 kb on - strand, within ECD_02669at 2796.492 kb on - strand, within ECD_02669at 2796.492 kb on - strand, within ECD_02669at 2796.531 kb on + strand, within ECD_02669at 2796.548 kb on - strand, within ECD_02669at 2796.643 kb on - strand, within ECD_02669at 2796.656 kb on - strand, within ECD_02669at 2796.676 kb on - strand, within ECD_02669at 2796.693 kb on - strand, within ECD_02669at 2796.693 kb on - strand, within ECD_02669at 2796.720 kb on + strand, within ECD_02669at 2796.720 kb on + strand, within ECD_02669at 2796.720 kb on + strand, within ECD_02669at 2796.720 kb on + strand, within ECD_02669at 2796.721 kb on - strand, within ECD_02669at 2796.721 kb on - strand, within ECD_02669at 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.888 kb on + strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.889 kb on - strandat 2796.899 kb on + strandat 2796.899 kb on + strandat 2796.899 kb on + strandat 2796.900 kb on - strandat 2796.900 kb on - strandat 2796.900 kb on - strandat 2796.900 kb on - strandat 2796.900 kb on - strandat 2796.900 kb on - strandat 2796.917 kb on + strandat 2796.973 kb on - strandat 2796.973 kb on - strandat 2797.008 kb on + strandat 2797.024 kb on + strandat 2797.024 kb on + strandat 2797.024 kb on + strandat 2797.024 kb on + strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.025 kb on - strandat 2797.027 kb on - strandat 2797.027 kb on - strandat 2797.027 kb on - strandat 2797.060 kb on - strandat 2797.106 kb on - strandat 2797.106 kb on - strandat 2797.135 kb on + strandat 2797.136 kb on - strandat 2797.262 kb on - strandat 2797.267 kb on + strandat 2797.267 kb on + strandat 2797.267 kb on + strandat 2797.267 kb on + strandat 2797.267 kb on + strandat 2797.267 kb on + strandat 2797.267 kb on + strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.268 kb on - strandat 2797.269 kb on + strandat 2797.269 kb on + strandat 2797.269 kb on + strandat 2797.269 kb on + strandat 2797.269 kb on + strandat 2797.270 kb on - strandat 2797.270 kb on - strandat 2797.270 kb on - strandat 2797.270 kb on - strandat 2797.270 kb on - strandat 2797.271 kb on + strandat 2797.272 kb on - strandat 2797.301 kb on + strandat 2797.301 kb on + strandat 2797.302 kb on - strandat 2797.302 kb on - strandat 2797.302 kb on - strandat 2797.306 kb on + strandat 2797.332 kb on + strandat 2798.723 kb on - strand, within ECD_02670at 2799.500 kb on - strand, within ECD_02670at 2799.848 kb on - strand, within ECD_02670at 2799.882 kb on - strand, within ECD_02670at 2799.956 kb on - strand, within ECD_02670at 2800.703 kb on + strandat 2800.709 kb on - strandat 2800.709 kb on - strandat 2800.709 kb on - strandat 2800.781 kb on + strand, within ECD_02671at 2800.787 kb on - strand, within ECD_02671at 2800.787 kb on - strand, within ECD_02671at 2800.905 kb on + strand, within ECD_02671at 2800.934 kb on + strand, within ECD_02671at 2800.998 kb on - strand, within ECD_02671at 2800.998 kb on - strand, within ECD_02671at 2801.012 kb on - strandat 2801.044 kb on + strandat 2801.044 kb on + strandat 2801.045 kb on - strandat 2801.045 kb on - strandat 2801.045 kb on - strandat 2801.045 kb on - strandat 2801.162 kb on - strand, within ECD_02672at 2801.162 kb on - strand, within ECD_02672at 2801.172 kb on + strand, within ECD_02672at 2801.173 kb on - strand, within ECD_02672at 2801.173 kb on - strand, within ECD_02672at 2801.173 kb on - strand, within ECD_02672at 2801.182 kb on + strand, within ECD_02672at 2801.217 kb on - strand, within ECD_02672at 2801.217 kb on - strand, within ECD_02672at 2801.366 kb on - strand, within ECD_02672at 2801.366 kb on - strand, within ECD_02672at 2801.368 kb on + strand, within ECD_02672at 2801.368 kb on + strand, within ECD_02672at 2801.456 kb on + strandat 2801.456 kb on + strandat 2801.456 kb on + strandat 2801.458 kb on + strandat 2801.458 kb on + strandat 2801.458 kb on + strandat 2801.458 kb on + strandat 2801.459 kb on - strandat 2801.459 kb on - strandat 2801.459 kb on - strandat 2801.459 kb on - strandat 2801.459 kb on - strandat 2801.493 kb on - strand, within ECD_02673at 2801.493 kb on - strand, within ECD_02673at 2801.493 kb on - strand, within ECD_02673at 2801.507 kb on + strand, within ECD_02673at 2801.508 kb on - strand, within ECD_02673at 2801.508 kb on - strand, within ECD_02673at 2801.508 kb on - strand, within ECD_02673at 2801.508 kb on - strand, within ECD_02673at 2801.508 kb on - strand, within ECD_02673at 2801.508 kb on - strand, within ECD_02673at 2801.508 kb on - strand, within ECD_02673at 2801.550 kb on + strand, within ECD_02673at 2801.551 kb on - strand, within ECD_02673at 2801.551 kb on - strand, within ECD_02673at 2801.551 kb on - strand, within ECD_02673at 2801.551 kb on - strand, within ECD_02673

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,796,450 + ECD_02669 0.75 -0.6
2,796,451 - ECD_02669 0.75 +0.1
2,796,451 - ECD_02669 0.75 +0.5
2,796,453 + ECD_02669 0.75 +0.7
2,796,458 + ECD_02669 0.76 -0.9
2,796,459 - ECD_02669 0.76 +0.1
2,796,463 - ECD_02669 0.76 -1.6
2,796,489 - ECD_02669 0.77 +0.2
2,796,492 - ECD_02669 0.77 -0.5
2,796,492 - ECD_02669 0.77 -0.5
2,796,531 + ECD_02669 0.78 +0.2
2,796,548 - ECD_02669 0.79 -0.4
2,796,643 - ECD_02669 0.82 +0.5
2,796,656 - ECD_02669 0.82 +0.7
2,796,676 - ECD_02669 0.83 +0.2
2,796,693 - ECD_02669 0.84 +0.6
2,796,693 - ECD_02669 0.84 +0.9
2,796,720 + ECD_02669 0.85 -2.6
2,796,720 + ECD_02669 0.85 -0.4
2,796,720 + ECD_02669 0.85 +0.1
2,796,720 + ECD_02669 0.85 +0.8
2,796,721 - ECD_02669 0.85 +0.8
2,796,721 - ECD_02669 0.85 -0.2
2,796,888 + -0.2
2,796,888 + -0.7
2,796,888 + -0.0
2,796,888 + -0.8
2,796,888 + -0.3
2,796,888 + -0.2
2,796,888 + +0.1
2,796,888 + +0.5
2,796,888 + +0.6
2,796,888 + -0.7
2,796,888 + -0.2
2,796,888 + -1.6
2,796,888 + -0.8
2,796,888 + +0.1
2,796,888 + +0.0
2,796,889 - +0.1
2,796,889 - +0.0
2,796,889 - -0.7
2,796,889 - +0.1
2,796,889 - +0.2
2,796,889 - +0.8
2,796,889 - -0.5
2,796,889 - +0.2
2,796,889 - -0.2
2,796,889 - -1.0
2,796,899 + +0.2
2,796,899 + +0.7
2,796,899 + +0.3
2,796,900 - -1.0
2,796,900 - -0.7
2,796,900 - +0.1
2,796,900 - +0.4
2,796,900 - +0.6
2,796,900 - +0.3
2,796,917 + +0.7
2,796,973 - +0.9
2,796,973 - -0.5
2,797,008 + +0.6
2,797,024 + -0.0
2,797,024 + +0.1
2,797,024 + +0.1
2,797,024 + -0.7
2,797,025 - -0.6
2,797,025 - +0.5
2,797,025 - +0.6
2,797,025 - +0.6
2,797,025 - +1.0
2,797,025 - -0.0
2,797,025 - +0.3
2,797,025 - +0.8
2,797,025 - +1.0
2,797,025 - +0.7
2,797,025 - +0.7
2,797,025 - -0.8
2,797,027 - -0.2
2,797,027 - +0.7
2,797,027 - +0.8
2,797,060 - -0.1
2,797,106 - -0.6
2,797,106 - +0.5
2,797,135 + +0.6
2,797,136 - -0.3
2,797,262 - +0.6
2,797,267 + +1.0
2,797,267 + +0.6
2,797,267 + +0.1
2,797,267 + -0.3
2,797,267 + -0.8
2,797,267 + -1.0
2,797,267 + +0.2
2,797,268 - +0.6
2,797,268 - -0.6
2,797,268 - +0.8
2,797,268 - +0.7
2,797,268 - +0.5
2,797,268 - -1.1
2,797,268 - +0.2
2,797,268 - +0.1
2,797,268 - +0.1
2,797,268 - -0.6
2,797,268 - +0.5
2,797,268 - -1.7
2,797,269 + -0.3
2,797,269 + +0.2
2,797,269 + -0.7
2,797,269 + -0.5
2,797,269 + +0.8
2,797,270 - +0.4
2,797,270 - +1.3
2,797,270 - +0.9
2,797,270 - -0.0
2,797,270 - +1.0
2,797,271 + +0.3
2,797,272 - +0.5
2,797,301 + -0.6
2,797,301 + +0.8
2,797,302 - +0.1
2,797,302 - -0.3
2,797,302 - -1.2
2,797,306 + +0.2
2,797,332 + -1.2
2,798,723 - ECD_02670 0.41 +0.7
2,799,500 - ECD_02670 0.64 -0.2
2,799,848 - ECD_02670 0.74 +1.2
2,799,882 - ECD_02670 0.75 +0.8
2,799,956 - ECD_02670 0.78 +0.2
2,800,703 + +1.4
2,800,709 - -0.6
2,800,709 - +0.9
2,800,709 - +0.4
2,800,781 + ECD_02671 0.19 +0.4
2,800,787 - ECD_02671 0.20 +0.1
2,800,787 - ECD_02671 0.20 +1.1
2,800,905 + ECD_02671 0.57 -0.8
2,800,934 + ECD_02671 0.66 +1.6
2,800,998 - ECD_02671 0.85 +0.6
2,800,998 - ECD_02671 0.85 +0.4
2,801,012 - +0.6
2,801,044 + +0.5
2,801,044 + +0.4
2,801,045 - -0.1
2,801,045 - +0.3
2,801,045 - +0.0
2,801,045 - +0.9
2,801,162 - ECD_02672 0.33 +0.3
2,801,162 - ECD_02672 0.33 +0.3
2,801,172 + ECD_02672 0.35 -0.8
2,801,173 - ECD_02672 0.35 -0.4
2,801,173 - ECD_02672 0.35 -0.2
2,801,173 - ECD_02672 0.35 +0.3
2,801,182 + ECD_02672 0.38 +1.0
2,801,217 - ECD_02672 0.46 -0.1
2,801,217 - ECD_02672 0.46 +0.4
2,801,366 - ECD_02672 0.83 -0.6
2,801,366 - ECD_02672 0.83 +0.0
2,801,368 + ECD_02672 0.83 +0.8
2,801,368 + ECD_02672 0.83 +0.4
2,801,456 + -0.4
2,801,456 + +0.8
2,801,456 + -2.3
2,801,458 + -1.4
2,801,458 + -0.8
2,801,458 + +1.1
2,801,458 + -0.6
2,801,459 - -0.5
2,801,459 - -0.2
2,801,459 - +1.7
2,801,459 - +0.2
2,801,459 - -0.0
2,801,493 - ECD_02673 0.11 +0.5
2,801,493 - ECD_02673 0.11 -0.8
2,801,493 - ECD_02673 0.11 +0.0
2,801,507 + ECD_02673 0.13 +0.5
2,801,508 - ECD_02673 0.13 +0.3
2,801,508 - ECD_02673 0.13 +0.2
2,801,508 - ECD_02673 0.13 -0.2
2,801,508 - ECD_02673 0.13 +0.9
2,801,508 - ECD_02673 0.13 -1.0
2,801,508 - ECD_02673 0.13 +0.1
2,801,508 - ECD_02673 0.13 -0.6
2,801,550 + ECD_02673 0.21 +0.2
2,801,551 - ECD_02673 0.21 +1.1
2,801,551 - ECD_02673 0.21 -1.2
2,801,551 - ECD_02673 0.21 -0.0
2,801,551 - ECD_02673 0.21 -0.1

Or see this region's nucleotide sequence