Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02650 and ECD_02651 overlap by 50 nucleotides ECD_02651 and ECD_02652 are separated by 3 nucleotides ECD_02652 and ECD_02653 are separated by 469 nucleotides
ECD_02650: ECD_02650 - D-ribose-binding periplasmic protein, at 2,769,884 to 2,770,957
_02650
ECD_02651: ECD_02651 - Ribose transport system permease protein rbsC, at 2,770,908 to 2,771,891
_02651
ECD_02652: ECD_02652 - hypothetical protein, at 2,771,895 to 2,773,394
_02652
ECD_02653: ECD_02653 - L-fucose isomerase, at 2,773,864 to 2,775,639
_02653
Position (kb)
2771
2772
2773
2774 Strain fitness (log2 ratio)
-1
0
1 at 2770.905 kb on - strand at 2770.932 kb on - strand at 2771.136 kb on + strand, within ECD_02651 at 2771.137 kb on - strand, within ECD_02651 at 2771.197 kb on - strand, within ECD_02651 at 2771.197 kb on - strand, within ECD_02651 at 2771.278 kb on - strand, within ECD_02651 at 2771.285 kb on - strand, within ECD_02651 at 2771.320 kb on + strand, within ECD_02651 at 2771.321 kb on - strand, within ECD_02651 at 2771.321 kb on - strand, within ECD_02651 at 2771.337 kb on + strand, within ECD_02651 at 2771.426 kb on - strand, within ECD_02651 at 2771.454 kb on - strand, within ECD_02651 at 2771.460 kb on - strand, within ECD_02651 at 2771.496 kb on - strand, within ECD_02651 at 2771.496 kb on - strand, within ECD_02651 at 2771.573 kb on + strand, within ECD_02651 at 2771.577 kb on - strand, within ECD_02651 at 2771.703 kb on - strand, within ECD_02651 at 2772.569 kb on + strand, within ECD_02652 at 2772.606 kb on + strand, within ECD_02652 at 2772.715 kb on + strand, within ECD_02652 at 2772.734 kb on - strand, within ECD_02652 at 2772.734 kb on - strand, within ECD_02652 at 2772.772 kb on - strand, within ECD_02652 at 2772.803 kb on - strand, within ECD_02652 at 2772.884 kb on + strand, within ECD_02652 at 2773.455 kb on - strand at 2773.565 kb on - strand at 2773.755 kb on + strand at 2773.959 kb on + strand at 2773.959 kb on + strand at 2774.102 kb on + strand, within ECD_02653 at 2774.103 kb on - strand, within ECD_02653 at 2774.103 kb on - strand, within ECD_02653 at 2774.115 kb on + strand, within ECD_02653 at 2774.138 kb on - strand, within ECD_02653 at 2774.278 kb on + strand, within ECD_02653 at 2774.278 kb on + strand, within ECD_02653 at 2774.279 kb on - strand, within ECD_02653 at 2774.385 kb on + strand, within ECD_02653 at 2774.385 kb on + strand, within ECD_02653 at 2774.385 kb on + strand, within ECD_02653 at 2774.386 kb on - strand, within ECD_02653 at 2774.392 kb on + strand, within ECD_02653 at 2774.392 kb on + strand, within ECD_02653 at 2774.392 kb on + strand, within ECD_02653 at 2774.392 kb on + strand, within ECD_02653 at 2774.392 kb on + strand, within ECD_02653 at 2774.392 kb on + strand, within ECD_02653 at 2774.393 kb on - strand, within ECD_02653 at 2774.393 kb on - strand, within ECD_02653
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,770,905 - +0.8 2,770,932 - +0.0 2,771,136 + ECD_02651 0.23 -0.1 2,771,137 - ECD_02651 0.23 +0.2 2,771,197 - ECD_02651 0.29 -0.1 2,771,197 - ECD_02651 0.29 -0.5 2,771,278 - ECD_02651 0.38 +0.1 2,771,285 - ECD_02651 0.38 -0.1 2,771,320 + ECD_02651 0.42 -0.3 2,771,321 - ECD_02651 0.42 +0.0 2,771,321 - ECD_02651 0.42 +0.6 2,771,337 + ECD_02651 0.44 +0.4 2,771,426 - ECD_02651 0.53 +0.4 2,771,454 - ECD_02651 0.55 -0.3 2,771,460 - ECD_02651 0.56 -0.7 2,771,496 - ECD_02651 0.60 -0.2 2,771,496 - ECD_02651 0.60 -0.4 2,771,573 + ECD_02651 0.68 +0.4 2,771,577 - ECD_02651 0.68 -0.2 2,771,703 - ECD_02651 0.81 -0.1 2,772,569 + ECD_02652 0.45 +0.6 2,772,606 + ECD_02652 0.47 +0.7 2,772,715 + ECD_02652 0.55 +0.6 2,772,734 - ECD_02652 0.56 +1.0 2,772,734 - ECD_02652 0.56 +1.1 2,772,772 - ECD_02652 0.58 +0.0 2,772,803 - ECD_02652 0.61 +1.0 2,772,884 + ECD_02652 0.66 +0.3 2,773,455 - -0.7 2,773,565 - +0.0 2,773,755 + +0.1 2,773,959 + -0.8 2,773,959 + -0.2 2,774,102 + ECD_02653 0.13 -0.7 2,774,103 - ECD_02653 0.13 -0.6 2,774,103 - ECD_02653 0.13 +0.7 2,774,115 + ECD_02653 0.14 +0.4 2,774,138 - ECD_02653 0.15 +0.2 2,774,278 + ECD_02653 0.23 +0.0 2,774,278 + ECD_02653 0.23 +0.3 2,774,279 - ECD_02653 0.23 -0.0 2,774,385 + ECD_02653 0.29 +0.1 2,774,385 + ECD_02653 0.29 -0.2 2,774,385 + ECD_02653 0.29 -0.8 2,774,386 - ECD_02653 0.29 +0.1 2,774,392 + ECD_02653 0.30 -0.3 2,774,392 + ECD_02653 0.30 +0.5 2,774,392 + ECD_02653 0.30 -0.6 2,774,392 + ECD_02653 0.30 -0.0 2,774,392 + ECD_02653 0.30 -0.9 2,774,392 + ECD_02653 0.30 +0.7 2,774,393 - ECD_02653 0.30 +0.7 2,774,393 - ECD_02653 0.30 +0.7
Or see this region's nucleotide sequence