Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02585 and ECD_02586 are separated by 195 nucleotides ECD_02586 and ECD_02587 overlap by 4 nucleotides
ECD_02585: ECD_02585 - DeoR family putative transcriptional regulator, at 2,700,434 to 2,701,201
_02585
ECD_02586: ECD_02586 - putative dehydrogenase, at 2,701,397 to 2,702,305
_02586
ECD_02587: ECD_02587 - FliA-regulated DUF1537 family protein, at 2,702,302 to 2,703,564
_02587
Position (kb)
2701
2702
2703 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2700.514 kb on + strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.570 kb on + strand, within ECD_02585 at 2700.641 kb on - strand, within ECD_02585 at 2700.692 kb on - strand, within ECD_02585 at 2700.800 kb on - strand, within ECD_02585 at 2700.800 kb on - strand, within ECD_02585 at 2700.817 kb on - strand, within ECD_02585 at 2700.817 kb on - strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.916 kb on + strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2701.102 kb on + strand, within ECD_02585 at 2701.102 kb on + strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.138 kb on + strand at 2701.139 kb on - strand at 2701.161 kb on - strand at 2701.161 kb on - strand at 2701.161 kb on - strand at 2701.234 kb on + strand at 2701.234 kb on + strand at 2701.234 kb on + strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.239 kb on + strand at 2701.240 kb on - strand at 2701.269 kb on + strand at 2701.277 kb on - strand at 2701.277 kb on - strand at 2701.277 kb on - strand at 2701.286 kb on - strand at 2701.347 kb on + strand at 2701.437 kb on + strand at 2701.437 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.489 kb on + strand, within ECD_02586 at 2701.489 kb on + strand, within ECD_02586 at 2701.490 kb on - strand, within ECD_02586 at 2701.525 kb on + strand, within ECD_02586 at 2701.627 kb on + strand, within ECD_02586 at 2701.791 kb on + strand, within ECD_02586 at 2701.897 kb on - strand, within ECD_02586 at 2701.897 kb on - strand, within ECD_02586 at 2701.914 kb on + strand, within ECD_02586 at 2701.915 kb on - strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.961 kb on - strand, within ECD_02586 at 2701.961 kb on - strand, within ECD_02586 at 2701.961 kb on - strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.155 kb on + strand, within ECD_02586 at 2702.206 kb on + strand, within ECD_02586 at 2702.206 kb on + strand, within ECD_02586 at 2702.206 kb on + strand, within ECD_02586 at 2702.207 kb on - strand, within ECD_02586 at 2702.207 kb on - strand, within ECD_02586 at 2702.378 kb on + strand at 2702.378 kb on + strand at 2702.412 kb on + strand at 2702.412 kb on + strand at 2702.413 kb on - strand at 2702.539 kb on + strand, within ECD_02587 at 2702.540 kb on - strand, within ECD_02587 at 2702.540 kb on - strand, within ECD_02587 at 2702.540 kb on - strand, within ECD_02587 at 2702.540 kb on - strand, within ECD_02587 at 2702.548 kb on + strand, within ECD_02587 at 2702.548 kb on + strand, within ECD_02587 at 2702.548 kb on + strand, within ECD_02587 at 2702.548 kb on + strand, within ECD_02587 at 2702.548 kb on + strand, within ECD_02587 at 2702.548 kb on + strand, within ECD_02587 at 2702.549 kb on - strand, within ECD_02587 at 2702.549 kb on - strand, within ECD_02587 at 2702.549 kb on - strand, within ECD_02587 at 2702.549 kb on - strand, within ECD_02587 at 2702.556 kb on + strand, within ECD_02587 at 2702.568 kb on + strand, within ECD_02587 at 2702.580 kb on + strand, within ECD_02587 at 2702.580 kb on + strand, within ECD_02587 at 2702.580 kb on + strand, within ECD_02587 at 2702.581 kb on - strand, within ECD_02587 at 2702.581 kb on - strand, within ECD_02587 at 2702.583 kb on + strand, within ECD_02587 at 2702.583 kb on + strand, within ECD_02587 at 2702.584 kb on - strand, within ECD_02587 at 2702.631 kb on + strand, within ECD_02587 at 2702.667 kb on + strand, within ECD_02587 at 2702.668 kb on - strand, within ECD_02587 at 2702.683 kb on + strand, within ECD_02587 at 2702.683 kb on + strand, within ECD_02587 at 2702.684 kb on - strand, within ECD_02587 at 2702.739 kb on - strand, within ECD_02587 at 2702.758 kb on + strand, within ECD_02587 at 2702.758 kb on + strand, within ECD_02587 at 2702.864 kb on + strand, within ECD_02587 at 2702.864 kb on + strand, within ECD_02587 at 2702.864 kb on + strand, within ECD_02587 at 2702.864 kb on + strand, within ECD_02587 at 2702.865 kb on - strand, within ECD_02587 at 2702.865 kb on - strand, within ECD_02587 at 2702.865 kb on - strand, within ECD_02587 at 2703.060 kb on - strand, within ECD_02587 at 2703.102 kb on - strand, within ECD_02587 at 2703.221 kb on + strand, within ECD_02587 at 2703.221 kb on + strand, within ECD_02587 at 2703.283 kb on + strand, within ECD_02587 at 2703.284 kb on - strand, within ECD_02587 at 2703.284 kb on - strand, within ECD_02587 at 2703.284 kb on - strand, within ECD_02587
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,700,514 + ECD_02585 0.10 +0.4 2,700,518 - ECD_02585 0.11 -1.3 2,700,518 - ECD_02585 0.11 +0.0 2,700,518 - ECD_02585 0.11 -0.5 2,700,570 + ECD_02585 0.18 -0.6 2,700,641 - ECD_02585 0.27 +0.5 2,700,692 - ECD_02585 0.34 -0.2 2,700,800 - ECD_02585 0.48 -0.1 2,700,800 - ECD_02585 0.48 +0.5 2,700,817 - ECD_02585 0.50 -0.1 2,700,817 - ECD_02585 0.50 -1.2 2,700,912 + ECD_02585 0.62 +2.2 2,700,912 + ECD_02585 0.62 +0.5 2,700,912 + ECD_02585 0.62 -1.4 2,700,913 - ECD_02585 0.62 -1.1 2,700,913 - ECD_02585 0.62 +0.3 2,700,913 - ECD_02585 0.62 +0.5 2,700,916 + ECD_02585 0.63 +0.1 2,700,917 - ECD_02585 0.63 -0.2 2,700,917 - ECD_02585 0.63 +0.1 2,700,917 - ECD_02585 0.63 -0.1 2,700,917 - ECD_02585 0.63 +0.8 2,700,917 - ECD_02585 0.63 +0.3 2,700,917 - ECD_02585 0.63 +0.3 2,701,102 + ECD_02585 0.87 -1.2 2,701,102 + ECD_02585 0.87 +0.7 2,701,103 - ECD_02585 0.87 +0.1 2,701,103 - ECD_02585 0.87 -0.4 2,701,103 - ECD_02585 0.87 +0.1 2,701,103 - ECD_02585 0.87 -0.1 2,701,103 - ECD_02585 0.87 +0.1 2,701,103 - ECD_02585 0.87 -1.4 2,701,103 - ECD_02585 0.87 +1.7 2,701,103 - ECD_02585 0.87 +0.8 2,701,103 - ECD_02585 0.87 -1.2 2,701,103 - ECD_02585 0.87 -0.1 2,701,138 + +0.4 2,701,139 - -2.7 2,701,161 - +0.6 2,701,161 - +0.7 2,701,161 - +1.4 2,701,234 + +0.9 2,701,234 + +1.4 2,701,234 + -0.1 2,701,235 - +0.3 2,701,235 - -1.3 2,701,235 - +0.9 2,701,235 - +0.3 2,701,239 + -0.7 2,701,240 - -0.9 2,701,269 + -0.9 2,701,277 - -0.5 2,701,277 - -0.6 2,701,277 - +0.8 2,701,286 - +0.5 2,701,347 + +0.9 2,701,437 + -0.6 2,701,437 + -0.1 2,701,469 + +0.3 2,701,469 + -0.3 2,701,469 + -0.5 2,701,469 + -0.6 2,701,469 + +0.1 2,701,469 + +0.9 2,701,469 + -2.1 2,701,489 + ECD_02586 0.10 +0.6 2,701,489 + ECD_02586 0.10 +0.3 2,701,490 - ECD_02586 0.10 +0.3 2,701,525 + ECD_02586 0.14 +1.1 2,701,627 + ECD_02586 0.25 -0.6 2,701,791 + ECD_02586 0.43 -0.2 2,701,897 - ECD_02586 0.55 +0.9 2,701,897 - ECD_02586 0.55 +0.6 2,701,914 + ECD_02586 0.57 +0.4 2,701,915 - ECD_02586 0.57 -0.9 2,701,956 + ECD_02586 0.61 -0.0 2,701,956 + ECD_02586 0.61 +0.1 2,701,956 + ECD_02586 0.61 +0.5 2,701,956 + ECD_02586 0.61 -0.9 2,701,960 + ECD_02586 0.62 +1.4 2,701,960 + ECD_02586 0.62 -0.4 2,701,960 + ECD_02586 0.62 -0.2 2,701,960 + ECD_02586 0.62 +0.7 2,701,960 + ECD_02586 0.62 -2.7 2,701,960 + ECD_02586 0.62 -1.5 2,701,960 + ECD_02586 0.62 -0.0 2,701,960 + ECD_02586 0.62 -0.8 2,701,960 + ECD_02586 0.62 +0.0 2,701,960 + ECD_02586 0.62 -0.3 2,701,960 + ECD_02586 0.62 +0.9 2,701,961 - ECD_02586 0.62 +1.7 2,701,961 - ECD_02586 0.62 -0.1 2,701,961 - ECD_02586 0.62 +1.2 2,702,024 + ECD_02586 0.69 +0.4 2,702,024 + ECD_02586 0.69 +0.6 2,702,024 + ECD_02586 0.69 -0.8 2,702,024 + ECD_02586 0.69 +0.0 2,702,024 + ECD_02586 0.69 +0.1 2,702,024 + ECD_02586 0.69 +0.6 2,702,024 + ECD_02586 0.69 +1.0 2,702,024 + ECD_02586 0.69 -0.2 2,702,024 + ECD_02586 0.69 -0.2 2,702,024 + ECD_02586 0.69 +0.7 2,702,024 + ECD_02586 0.69 -0.5 2,702,024 + ECD_02586 0.69 +1.4 2,702,024 + ECD_02586 0.69 +0.6 2,702,024 + ECD_02586 0.69 +1.1 2,702,024 + ECD_02586 0.69 -0.8 2,702,025 - ECD_02586 0.69 +0.4 2,702,025 - ECD_02586 0.69 +0.2 2,702,025 - ECD_02586 0.69 +0.5 2,702,025 - ECD_02586 0.69 +0.4 2,702,155 + ECD_02586 0.83 +0.3 2,702,206 + ECD_02586 0.89 +1.0 2,702,206 + ECD_02586 0.89 -0.1 2,702,206 + ECD_02586 0.89 +0.1 2,702,207 - ECD_02586 0.89 -0.3 2,702,207 - ECD_02586 0.89 +0.8 2,702,378 + -0.9 2,702,378 + +1.4 2,702,412 + +0.6 2,702,412 + +0.1 2,702,413 - +0.3 2,702,539 + ECD_02587 0.19 +1.0 2,702,540 - ECD_02587 0.19 -0.9 2,702,540 - ECD_02587 0.19 -1.5 2,702,540 - ECD_02587 0.19 +0.0 2,702,540 - ECD_02587 0.19 +0.2 2,702,548 + ECD_02587 0.19 +0.4 2,702,548 + ECD_02587 0.19 -0.7 2,702,548 + ECD_02587 0.19 -0.2 2,702,548 + ECD_02587 0.19 -0.3 2,702,548 + ECD_02587 0.19 +1.4 2,702,548 + ECD_02587 0.19 +0.5 2,702,549 - ECD_02587 0.20 +0.4 2,702,549 - ECD_02587 0.20 +0.8 2,702,549 - ECD_02587 0.20 +1.2 2,702,549 - ECD_02587 0.20 -0.2 2,702,556 + ECD_02587 0.20 -0.4 2,702,568 + ECD_02587 0.21 +0.1 2,702,580 + ECD_02587 0.22 +0.5 2,702,580 + ECD_02587 0.22 -0.9 2,702,580 + ECD_02587 0.22 +0.8 2,702,581 - ECD_02587 0.22 -2.1 2,702,581 - ECD_02587 0.22 -1.3 2,702,583 + ECD_02587 0.22 -0.6 2,702,583 + ECD_02587 0.22 +0.7 2,702,584 - ECD_02587 0.22 +0.2 2,702,631 + ECD_02587 0.26 -1.9 2,702,667 + ECD_02587 0.29 -1.7 2,702,668 - ECD_02587 0.29 +0.5 2,702,683 + ECD_02587 0.30 -0.0 2,702,683 + ECD_02587 0.30 -0.6 2,702,684 - ECD_02587 0.30 +0.3 2,702,739 - ECD_02587 0.35 +0.3 2,702,758 + ECD_02587 0.36 -1.1 2,702,758 + ECD_02587 0.36 +0.7 2,702,864 + ECD_02587 0.44 +0.3 2,702,864 + ECD_02587 0.44 +0.1 2,702,864 + ECD_02587 0.44 +1.4 2,702,864 + ECD_02587 0.44 -0.8 2,702,865 - ECD_02587 0.45 +0.3 2,702,865 - ECD_02587 0.45 +1.9 2,702,865 - ECD_02587 0.45 +0.9 2,703,060 - ECD_02587 0.60 +0.5 2,703,102 - ECD_02587 0.63 +0.4 2,703,221 + ECD_02587 0.73 -1.9 2,703,221 + ECD_02587 0.73 +0.4 2,703,283 + ECD_02587 0.78 -0.8 2,703,284 - ECD_02587 0.78 +0.4 2,703,284 - ECD_02587 0.78 -0.8 2,703,284 - ECD_02587 0.78 +1.1
Or see this region's nucleotide sequence