Strain Fitness in Escherichia coli BL21 around ECD_02586

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02585 and ECD_02586 are separated by 195 nucleotidesECD_02586 and ECD_02587 overlap by 4 nucleotides ECD_02585: ECD_02585 - DeoR family putative transcriptional regulator, at 2,700,434 to 2,701,201 _02585 ECD_02586: ECD_02586 - putative dehydrogenase, at 2,701,397 to 2,702,305 _02586 ECD_02587: ECD_02587 - FliA-regulated DUF1537 family protein, at 2,702,302 to 2,703,564 _02587 Position (kb) 2701 2702 2703Strain fitness (log2 ratio) -2 -1 0 1 2at 2700.514 kb on + strand, within ECD_02585at 2700.518 kb on - strand, within ECD_02585at 2700.518 kb on - strand, within ECD_02585at 2700.518 kb on - strand, within ECD_02585at 2700.570 kb on + strand, within ECD_02585at 2700.641 kb on - strand, within ECD_02585at 2700.692 kb on - strand, within ECD_02585at 2700.800 kb on - strand, within ECD_02585at 2700.800 kb on - strand, within ECD_02585at 2700.817 kb on - strand, within ECD_02585at 2700.817 kb on - strand, within ECD_02585at 2700.912 kb on + strand, within ECD_02585at 2700.912 kb on + strand, within ECD_02585at 2700.912 kb on + strand, within ECD_02585at 2700.913 kb on - strand, within ECD_02585at 2700.913 kb on - strand, within ECD_02585at 2700.913 kb on - strand, within ECD_02585at 2700.916 kb on + strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2701.102 kb on + strand, within ECD_02585at 2701.102 kb on + strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.138 kb on + strandat 2701.139 kb on - strandat 2701.161 kb on - strandat 2701.161 kb on - strandat 2701.161 kb on - strandat 2701.234 kb on + strandat 2701.234 kb on + strandat 2701.234 kb on + strandat 2701.235 kb on - strandat 2701.235 kb on - strandat 2701.235 kb on - strandat 2701.235 kb on - strandat 2701.239 kb on + strandat 2701.240 kb on - strandat 2701.269 kb on + strandat 2701.277 kb on - strandat 2701.277 kb on - strandat 2701.277 kb on - strandat 2701.286 kb on - strandat 2701.347 kb on + strandat 2701.437 kb on + strandat 2701.437 kb on + strandat 2701.469 kb on + strandat 2701.469 kb on + strandat 2701.469 kb on + strandat 2701.469 kb on + strandat 2701.469 kb on + strandat 2701.469 kb on + strandat 2701.469 kb on + strandat 2701.489 kb on + strand, within ECD_02586at 2701.489 kb on + strand, within ECD_02586at 2701.490 kb on - strand, within ECD_02586at 2701.525 kb on + strand, within ECD_02586at 2701.627 kb on + strand, within ECD_02586at 2701.791 kb on + strand, within ECD_02586at 2701.897 kb on - strand, within ECD_02586at 2701.897 kb on - strand, within ECD_02586at 2701.914 kb on + strand, within ECD_02586at 2701.915 kb on - strand, within ECD_02586at 2701.956 kb on + strand, within ECD_02586at 2701.956 kb on + strand, within ECD_02586at 2701.956 kb on + strand, within ECD_02586at 2701.956 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.960 kb on + strand, within ECD_02586at 2701.961 kb on - strand, within ECD_02586at 2701.961 kb on - strand, within ECD_02586at 2701.961 kb on - strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.024 kb on + strand, within ECD_02586at 2702.025 kb on - strand, within ECD_02586at 2702.025 kb on - strand, within ECD_02586at 2702.025 kb on - strand, within ECD_02586at 2702.025 kb on - strand, within ECD_02586at 2702.155 kb on + strand, within ECD_02586at 2702.206 kb on + strand, within ECD_02586at 2702.206 kb on + strand, within ECD_02586at 2702.206 kb on + strand, within ECD_02586at 2702.207 kb on - strand, within ECD_02586at 2702.207 kb on - strand, within ECD_02586at 2702.378 kb on + strandat 2702.378 kb on + strandat 2702.412 kb on + strandat 2702.412 kb on + strandat 2702.413 kb on - strandat 2702.539 kb on + strand, within ECD_02587at 2702.540 kb on - strand, within ECD_02587at 2702.540 kb on - strand, within ECD_02587at 2702.540 kb on - strand, within ECD_02587at 2702.540 kb on - strand, within ECD_02587at 2702.548 kb on + strand, within ECD_02587at 2702.548 kb on + strand, within ECD_02587at 2702.548 kb on + strand, within ECD_02587at 2702.548 kb on + strand, within ECD_02587at 2702.548 kb on + strand, within ECD_02587at 2702.548 kb on + strand, within ECD_02587at 2702.549 kb on - strand, within ECD_02587at 2702.549 kb on - strand, within ECD_02587at 2702.549 kb on - strand, within ECD_02587at 2702.549 kb on - strand, within ECD_02587at 2702.556 kb on + strand, within ECD_02587at 2702.568 kb on + strand, within ECD_02587at 2702.580 kb on + strand, within ECD_02587at 2702.580 kb on + strand, within ECD_02587at 2702.580 kb on + strand, within ECD_02587at 2702.581 kb on - strand, within ECD_02587at 2702.581 kb on - strand, within ECD_02587at 2702.583 kb on + strand, within ECD_02587at 2702.583 kb on + strand, within ECD_02587at 2702.584 kb on - strand, within ECD_02587at 2702.631 kb on + strand, within ECD_02587at 2702.667 kb on + strand, within ECD_02587at 2702.668 kb on - strand, within ECD_02587at 2702.683 kb on + strand, within ECD_02587at 2702.683 kb on + strand, within ECD_02587at 2702.684 kb on - strand, within ECD_02587at 2702.739 kb on - strand, within ECD_02587at 2702.758 kb on + strand, within ECD_02587at 2702.758 kb on + strand, within ECD_02587at 2702.864 kb on + strand, within ECD_02587at 2702.864 kb on + strand, within ECD_02587at 2702.864 kb on + strand, within ECD_02587at 2702.864 kb on + strand, within ECD_02587at 2702.865 kb on - strand, within ECD_02587at 2702.865 kb on - strand, within ECD_02587at 2702.865 kb on - strand, within ECD_02587at 2703.060 kb on - strand, within ECD_02587at 2703.102 kb on - strand, within ECD_02587at 2703.221 kb on + strand, within ECD_02587at 2703.221 kb on + strand, within ECD_02587at 2703.283 kb on + strand, within ECD_02587at 2703.284 kb on - strand, within ECD_02587at 2703.284 kb on - strand, within ECD_02587at 2703.284 kb on - strand, within ECD_02587

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,700,514 + ECD_02585 0.10 +0.4
2,700,518 - ECD_02585 0.11 -1.3
2,700,518 - ECD_02585 0.11 +0.0
2,700,518 - ECD_02585 0.11 -0.5
2,700,570 + ECD_02585 0.18 -0.6
2,700,641 - ECD_02585 0.27 +0.5
2,700,692 - ECD_02585 0.34 -0.2
2,700,800 - ECD_02585 0.48 -0.1
2,700,800 - ECD_02585 0.48 +0.5
2,700,817 - ECD_02585 0.50 -0.1
2,700,817 - ECD_02585 0.50 -1.2
2,700,912 + ECD_02585 0.62 +2.2
2,700,912 + ECD_02585 0.62 +0.5
2,700,912 + ECD_02585 0.62 -1.4
2,700,913 - ECD_02585 0.62 -1.1
2,700,913 - ECD_02585 0.62 +0.3
2,700,913 - ECD_02585 0.62 +0.5
2,700,916 + ECD_02585 0.63 +0.1
2,700,917 - ECD_02585 0.63 -0.2
2,700,917 - ECD_02585 0.63 +0.1
2,700,917 - ECD_02585 0.63 -0.1
2,700,917 - ECD_02585 0.63 +0.8
2,700,917 - ECD_02585 0.63 +0.3
2,700,917 - ECD_02585 0.63 +0.3
2,701,102 + ECD_02585 0.87 -1.2
2,701,102 + ECD_02585 0.87 +0.7
2,701,103 - ECD_02585 0.87 +0.1
2,701,103 - ECD_02585 0.87 -0.4
2,701,103 - ECD_02585 0.87 +0.1
2,701,103 - ECD_02585 0.87 -0.1
2,701,103 - ECD_02585 0.87 +0.1
2,701,103 - ECD_02585 0.87 -1.4
2,701,103 - ECD_02585 0.87 +1.7
2,701,103 - ECD_02585 0.87 +0.8
2,701,103 - ECD_02585 0.87 -1.2
2,701,103 - ECD_02585 0.87 -0.1
2,701,138 + +0.4
2,701,139 - -2.7
2,701,161 - +0.6
2,701,161 - +0.7
2,701,161 - +1.4
2,701,234 + +0.9
2,701,234 + +1.4
2,701,234 + -0.1
2,701,235 - +0.3
2,701,235 - -1.3
2,701,235 - +0.9
2,701,235 - +0.3
2,701,239 + -0.7
2,701,240 - -0.9
2,701,269 + -0.9
2,701,277 - -0.5
2,701,277 - -0.6
2,701,277 - +0.8
2,701,286 - +0.5
2,701,347 + +0.9
2,701,437 + -0.6
2,701,437 + -0.1
2,701,469 + +0.3
2,701,469 + -0.3
2,701,469 + -0.5
2,701,469 + -0.6
2,701,469 + +0.1
2,701,469 + +0.9
2,701,469 + -2.1
2,701,489 + ECD_02586 0.10 +0.6
2,701,489 + ECD_02586 0.10 +0.3
2,701,490 - ECD_02586 0.10 +0.3
2,701,525 + ECD_02586 0.14 +1.1
2,701,627 + ECD_02586 0.25 -0.6
2,701,791 + ECD_02586 0.43 -0.2
2,701,897 - ECD_02586 0.55 +0.9
2,701,897 - ECD_02586 0.55 +0.6
2,701,914 + ECD_02586 0.57 +0.4
2,701,915 - ECD_02586 0.57 -0.9
2,701,956 + ECD_02586 0.61 -0.0
2,701,956 + ECD_02586 0.61 +0.1
2,701,956 + ECD_02586 0.61 +0.5
2,701,956 + ECD_02586 0.61 -0.9
2,701,960 + ECD_02586 0.62 +1.4
2,701,960 + ECD_02586 0.62 -0.4
2,701,960 + ECD_02586 0.62 -0.2
2,701,960 + ECD_02586 0.62 +0.7
2,701,960 + ECD_02586 0.62 -2.7
2,701,960 + ECD_02586 0.62 -1.5
2,701,960 + ECD_02586 0.62 -0.0
2,701,960 + ECD_02586 0.62 -0.8
2,701,960 + ECD_02586 0.62 +0.0
2,701,960 + ECD_02586 0.62 -0.3
2,701,960 + ECD_02586 0.62 +0.9
2,701,961 - ECD_02586 0.62 +1.7
2,701,961 - ECD_02586 0.62 -0.1
2,701,961 - ECD_02586 0.62 +1.2
2,702,024 + ECD_02586 0.69 +0.4
2,702,024 + ECD_02586 0.69 +0.6
2,702,024 + ECD_02586 0.69 -0.8
2,702,024 + ECD_02586 0.69 +0.0
2,702,024 + ECD_02586 0.69 +0.1
2,702,024 + ECD_02586 0.69 +0.6
2,702,024 + ECD_02586 0.69 +1.0
2,702,024 + ECD_02586 0.69 -0.2
2,702,024 + ECD_02586 0.69 -0.2
2,702,024 + ECD_02586 0.69 +0.7
2,702,024 + ECD_02586 0.69 -0.5
2,702,024 + ECD_02586 0.69 +1.4
2,702,024 + ECD_02586 0.69 +0.6
2,702,024 + ECD_02586 0.69 +1.1
2,702,024 + ECD_02586 0.69 -0.8
2,702,025 - ECD_02586 0.69 +0.4
2,702,025 - ECD_02586 0.69 +0.2
2,702,025 - ECD_02586 0.69 +0.5
2,702,025 - ECD_02586 0.69 +0.4
2,702,155 + ECD_02586 0.83 +0.3
2,702,206 + ECD_02586 0.89 +1.0
2,702,206 + ECD_02586 0.89 -0.1
2,702,206 + ECD_02586 0.89 +0.1
2,702,207 - ECD_02586 0.89 -0.3
2,702,207 - ECD_02586 0.89 +0.8
2,702,378 + -0.9
2,702,378 + +1.4
2,702,412 + +0.6
2,702,412 + +0.1
2,702,413 - +0.3
2,702,539 + ECD_02587 0.19 +1.0
2,702,540 - ECD_02587 0.19 -0.9
2,702,540 - ECD_02587 0.19 -1.5
2,702,540 - ECD_02587 0.19 +0.0
2,702,540 - ECD_02587 0.19 +0.2
2,702,548 + ECD_02587 0.19 +0.4
2,702,548 + ECD_02587 0.19 -0.7
2,702,548 + ECD_02587 0.19 -0.2
2,702,548 + ECD_02587 0.19 -0.3
2,702,548 + ECD_02587 0.19 +1.4
2,702,548 + ECD_02587 0.19 +0.5
2,702,549 - ECD_02587 0.20 +0.4
2,702,549 - ECD_02587 0.20 +0.8
2,702,549 - ECD_02587 0.20 +1.2
2,702,549 - ECD_02587 0.20 -0.2
2,702,556 + ECD_02587 0.20 -0.4
2,702,568 + ECD_02587 0.21 +0.1
2,702,580 + ECD_02587 0.22 +0.5
2,702,580 + ECD_02587 0.22 -0.9
2,702,580 + ECD_02587 0.22 +0.8
2,702,581 - ECD_02587 0.22 -2.1
2,702,581 - ECD_02587 0.22 -1.3
2,702,583 + ECD_02587 0.22 -0.6
2,702,583 + ECD_02587 0.22 +0.7
2,702,584 - ECD_02587 0.22 +0.2
2,702,631 + ECD_02587 0.26 -1.9
2,702,667 + ECD_02587 0.29 -1.7
2,702,668 - ECD_02587 0.29 +0.5
2,702,683 + ECD_02587 0.30 -0.0
2,702,683 + ECD_02587 0.30 -0.6
2,702,684 - ECD_02587 0.30 +0.3
2,702,739 - ECD_02587 0.35 +0.3
2,702,758 + ECD_02587 0.36 -1.1
2,702,758 + ECD_02587 0.36 +0.7
2,702,864 + ECD_02587 0.44 +0.3
2,702,864 + ECD_02587 0.44 +0.1
2,702,864 + ECD_02587 0.44 +1.4
2,702,864 + ECD_02587 0.44 -0.8
2,702,865 - ECD_02587 0.45 +0.3
2,702,865 - ECD_02587 0.45 +1.9
2,702,865 - ECD_02587 0.45 +0.9
2,703,060 - ECD_02587 0.60 +0.5
2,703,102 - ECD_02587 0.63 +0.4
2,703,221 + ECD_02587 0.73 -1.9
2,703,221 + ECD_02587 0.73 +0.4
2,703,283 + ECD_02587 0.78 -0.8
2,703,284 - ECD_02587 0.78 +0.4
2,703,284 - ECD_02587 0.78 -0.8
2,703,284 - ECD_02587 0.78 +1.1

Or see this region's nucleotide sequence