Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02523 and ECD_02524 are separated by 9 nucleotides ECD_02524 and ECD_02525 are separated by 46 nucleotides ECD_02525 and ECD_02526 are separated by 667 nucleotides
ECD_02523: ECD_02523 - tributyltin-inducible repressor of ygaVP, at 2,637,071 to 2,637,370
_02523
ECD_02524: ECD_02524 - DUF2892 family inner membrane rhodanese, at 2,637,380 to 2,637,904
_02524
ECD_02525: ECD_02525 - DNA binding protein, nucleoid-associated, at 2,637,951 to 2,638,355
_02525
ECD_02526: ECD_02526 - alanine exporter, alanine-inducible, stress-responsive, at 2,639,023 to 2,639,472
_02526
Position (kb)
2637
2638
2639 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2636.989 kb on - strand at 2636.998 kb on + strand at 2636.998 kb on + strand at 2636.999 kb on - strand at 2637.015 kb on + strand at 2637.016 kb on - strand at 2637.016 kb on - strand at 2637.017 kb on + strand at 2637.017 kb on + strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.090 kb on + strand at 2637.090 kb on + strand at 2637.090 kb on + strand at 2637.120 kb on + strand, within ECD_02523 at 2637.253 kb on + strand, within ECD_02523 at 2637.253 kb on + strand, within ECD_02523 at 2637.253 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.305 kb on + strand, within ECD_02523 at 2637.359 kb on + strand at 2637.359 kb on + strand at 2637.359 kb on + strand at 2637.562 kb on - strand, within ECD_02524 at 2637.562 kb on - strand, within ECD_02524 at 2637.592 kb on + strand, within ECD_02524 at 2637.776 kb on + strand, within ECD_02524 at 2637.804 kb on + strand, within ECD_02524 at 2637.804 kb on + strand, within ECD_02524 at 2637.804 kb on + strand, within ECD_02524 at 2637.873 kb on + strand at 2637.873 kb on + strand at 2637.874 kb on - strand at 2637.874 kb on - strand at 2637.878 kb on - strand at 2637.952 kb on + strand at 2637.952 kb on + strand at 2637.953 kb on - strand at 2637.953 kb on - strand at 2637.953 kb on - strand at 2637.953 kb on - strand at 2637.978 kb on - strand at 2638.122 kb on - strand, within ECD_02525 at 2638.125 kb on - strand, within ECD_02525 at 2638.132 kb on - strand, within ECD_02525 at 2638.717 kb on + strand at 2638.718 kb on - strand at 2638.738 kb on - strand at 2638.738 kb on - strand at 2638.738 kb on - strand at 2638.746 kb on - strand at 2638.846 kb on - strand at 2638.870 kb on - strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.935 kb on + strand at 2638.936 kb on - strand at 2638.987 kb on + strand at 2639.006 kb on + strand at 2639.006 kb on + strand at 2639.007 kb on - strand at 2639.009 kb on + strand at 2639.010 kb on - strand at 2639.019 kb on + strand at 2639.019 kb on + strand at 2639.019 kb on + strand at 2639.019 kb on + strand at 2639.064 kb on + strand at 2639.064 kb on + strand at 2639.064 kb on + strand at 2639.064 kb on + strand at 2639.065 kb on - strand at 2639.065 kb on - strand at 2639.083 kb on + strand, within ECD_02526 at 2639.083 kb on + strand, within ECD_02526 at 2639.083 kb on + strand, within ECD_02526 at 2639.084 kb on - strand, within ECD_02526 at 2639.106 kb on + strand, within ECD_02526 at 2639.106 kb on + strand, within ECD_02526 at 2639.106 kb on + strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.107 kb on - strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.183 kb on + strand, within ECD_02526 at 2639.184 kb on - strand, within ECD_02526 at 2639.184 kb on - strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.202 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.206 kb on + strand, within ECD_02526 at 2639.207 kb on - strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.284 kb on + strand, within ECD_02526 at 2639.285 kb on - strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.308 kb on + strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.309 kb on - strand, within ECD_02526 at 2639.324 kb on + strand, within ECD_02526 at 2639.352 kb on + strand, within ECD_02526
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,636,989 - +0.3 2,636,998 + +0.8 2,636,998 + +0.1 2,636,999 - +0.6 2,637,015 + +0.3 2,637,016 - -0.4 2,637,016 - -0.2 2,637,017 + -0.3 2,637,017 + -0.0 2,637,018 - +0.4 2,637,018 - -0.5 2,637,018 - -0.2 2,637,018 - +0.2 2,637,018 - -0.1 2,637,018 - -0.2 2,637,018 - -0.9 2,637,018 - -0.8 2,637,018 - +0.3 2,637,018 - -0.1 2,637,018 - -0.8 2,637,018 - +0.9 2,637,018 - +0.9 2,637,018 - -0.2 2,637,090 + +0.2 2,637,090 + +0.1 2,637,090 + -0.0 2,637,120 + ECD_02523 0.16 +0.0 2,637,253 + ECD_02523 0.61 -0.1 2,637,253 + ECD_02523 0.61 +0.5 2,637,253 + ECD_02523 0.61 +0.1 2,637,303 + ECD_02523 0.77 +0.1 2,637,303 + ECD_02523 0.77 +0.2 2,637,303 + ECD_02523 0.77 -0.5 2,637,303 + ECD_02523 0.77 -1.0 2,637,305 + ECD_02523 0.78 -0.3 2,637,359 + -0.5 2,637,359 + -1.1 2,637,359 + -0.6 2,637,562 - ECD_02524 0.35 +1.3 2,637,562 - ECD_02524 0.35 -0.1 2,637,592 + ECD_02524 0.40 +1.3 2,637,776 + ECD_02524 0.75 -0.1 2,637,804 + ECD_02524 0.81 -0.6 2,637,804 + ECD_02524 0.81 -0.1 2,637,804 + ECD_02524 0.81 +0.2 2,637,873 + -0.1 2,637,873 + +1.0 2,637,874 - +0.9 2,637,874 - +0.5 2,637,878 - +0.1 2,637,952 + +1.2 2,637,952 + -1.0 2,637,953 - -1.8 2,637,953 - -0.8 2,637,953 - +0.8 2,637,953 - -0.2 2,637,978 - +0.2 2,638,122 - ECD_02525 0.42 +0.2 2,638,125 - ECD_02525 0.43 +0.6 2,638,132 - ECD_02525 0.45 +1.1 2,638,717 + -0.5 2,638,718 - +0.6 2,638,738 - +0.2 2,638,738 - -1.7 2,638,738 - +0.4 2,638,746 - +0.7 2,638,846 - +0.1 2,638,870 - +0.4 2,638,935 + +1.2 2,638,935 + +0.3 2,638,935 + +0.9 2,638,935 + -0.2 2,638,935 + -0.2 2,638,936 - +0.4 2,638,987 + +0.1 2,639,006 + +0.5 2,639,006 + +0.2 2,639,007 - -0.4 2,639,009 + +0.6 2,639,010 - -0.4 2,639,019 + -0.9 2,639,019 + +0.2 2,639,019 + -0.2 2,639,019 + -1.0 2,639,064 + -0.2 2,639,064 + -1.1 2,639,064 + +0.8 2,639,064 + -0.3 2,639,065 - +0.2 2,639,065 - -0.2 2,639,083 + ECD_02526 0.13 +0.2 2,639,083 + ECD_02526 0.13 -0.7 2,639,083 + ECD_02526 0.13 -0.2 2,639,084 - ECD_02526 0.14 +0.4 2,639,106 + ECD_02526 0.18 -0.0 2,639,106 + ECD_02526 0.18 +0.1 2,639,106 + ECD_02526 0.18 +0.1 2,639,107 - ECD_02526 0.19 -0.2 2,639,107 - ECD_02526 0.19 -0.5 2,639,107 - ECD_02526 0.19 +0.8 2,639,107 - ECD_02526 0.19 -1.6 2,639,183 + ECD_02526 0.36 -0.1 2,639,183 + ECD_02526 0.36 -0.8 2,639,183 + ECD_02526 0.36 +0.3 2,639,183 + ECD_02526 0.36 +0.2 2,639,183 + ECD_02526 0.36 -0.1 2,639,184 - ECD_02526 0.36 -0.2 2,639,184 - ECD_02526 0.36 +1.7 2,639,202 + ECD_02526 0.40 -0.1 2,639,202 + ECD_02526 0.40 +0.0 2,639,202 + ECD_02526 0.40 +0.1 2,639,202 + ECD_02526 0.40 +1.2 2,639,202 + ECD_02526 0.40 -1.1 2,639,202 + ECD_02526 0.40 -0.0 2,639,202 + ECD_02526 0.40 -0.1 2,639,202 + ECD_02526 0.40 +1.5 2,639,206 + ECD_02526 0.41 +1.4 2,639,206 + ECD_02526 0.41 -0.3 2,639,206 + ECD_02526 0.41 +0.3 2,639,206 + ECD_02526 0.41 -1.5 2,639,206 + ECD_02526 0.41 +0.0 2,639,207 - ECD_02526 0.41 +2.0 2,639,284 + ECD_02526 0.58 +0.2 2,639,284 + ECD_02526 0.58 +0.5 2,639,284 + ECD_02526 0.58 +0.2 2,639,284 + ECD_02526 0.58 -0.4 2,639,284 + ECD_02526 0.58 +1.7 2,639,284 + ECD_02526 0.58 +0.3 2,639,284 + ECD_02526 0.58 -0.3 2,639,284 + ECD_02526 0.58 +0.1 2,639,284 + ECD_02526 0.58 +0.5 2,639,284 + ECD_02526 0.58 -0.5 2,639,285 - ECD_02526 0.58 +0.9 2,639,308 + ECD_02526 0.63 -0.1 2,639,308 + ECD_02526 0.63 +0.2 2,639,308 + ECD_02526 0.63 -0.3 2,639,308 + ECD_02526 0.63 -0.6 2,639,308 + ECD_02526 0.63 -0.6 2,639,308 + ECD_02526 0.63 -0.2 2,639,308 + ECD_02526 0.63 +1.6 2,639,308 + ECD_02526 0.63 +0.6 2,639,308 + ECD_02526 0.63 -1.2 2,639,308 + ECD_02526 0.63 -0.8 2,639,309 - ECD_02526 0.64 -0.1 2,639,309 - ECD_02526 0.64 +0.8 2,639,309 - ECD_02526 0.64 +0.4 2,639,309 - ECD_02526 0.64 -0.3 2,639,324 + ECD_02526 0.67 +0.6 2,639,352 + ECD_02526 0.73 +0.4
Or see this region's nucleotide sequence