Strain Fitness in Escherichia coli BL21 around ECD_02525

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02523 and ECD_02524 are separated by 9 nucleotidesECD_02524 and ECD_02525 are separated by 46 nucleotidesECD_02525 and ECD_02526 are separated by 667 nucleotides ECD_02523: ECD_02523 - tributyltin-inducible repressor of ygaVP, at 2,637,071 to 2,637,370 _02523 ECD_02524: ECD_02524 - DUF2892 family inner membrane rhodanese, at 2,637,380 to 2,637,904 _02524 ECD_02525: ECD_02525 - DNA binding protein, nucleoid-associated, at 2,637,951 to 2,638,355 _02525 ECD_02526: ECD_02526 - alanine exporter, alanine-inducible, stress-responsive, at 2,639,023 to 2,639,472 _02526 Position (kb) 2637 2638 2639Strain fitness (log2 ratio) -2 -1 0 1 2at 2636.989 kb on - strandat 2636.998 kb on + strandat 2636.998 kb on + strandat 2636.999 kb on - strandat 2637.015 kb on + strandat 2637.016 kb on - strandat 2637.016 kb on - strandat 2637.017 kb on + strandat 2637.017 kb on + strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.018 kb on - strandat 2637.090 kb on + strandat 2637.090 kb on + strandat 2637.090 kb on + strandat 2637.120 kb on + strand, within ECD_02523at 2637.253 kb on + strand, within ECD_02523at 2637.253 kb on + strand, within ECD_02523at 2637.253 kb on + strand, within ECD_02523at 2637.303 kb on + strand, within ECD_02523at 2637.303 kb on + strand, within ECD_02523at 2637.303 kb on + strand, within ECD_02523at 2637.303 kb on + strand, within ECD_02523at 2637.305 kb on + strand, within ECD_02523at 2637.359 kb on + strandat 2637.359 kb on + strandat 2637.359 kb on + strandat 2637.562 kb on - strand, within ECD_02524at 2637.562 kb on - strand, within ECD_02524at 2637.592 kb on + strand, within ECD_02524at 2637.776 kb on + strand, within ECD_02524at 2637.804 kb on + strand, within ECD_02524at 2637.804 kb on + strand, within ECD_02524at 2637.804 kb on + strand, within ECD_02524at 2637.873 kb on + strandat 2637.873 kb on + strandat 2637.874 kb on - strandat 2637.874 kb on - strandat 2637.878 kb on - strandat 2637.952 kb on + strandat 2637.952 kb on + strandat 2637.953 kb on - strandat 2637.953 kb on - strandat 2637.953 kb on - strandat 2637.953 kb on - strandat 2637.978 kb on - strandat 2638.122 kb on - strand, within ECD_02525at 2638.125 kb on - strand, within ECD_02525at 2638.132 kb on - strand, within ECD_02525at 2638.717 kb on + strandat 2638.718 kb on - strandat 2638.738 kb on - strandat 2638.738 kb on - strandat 2638.738 kb on - strandat 2638.746 kb on - strandat 2638.846 kb on - strandat 2638.870 kb on - strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.935 kb on + strandat 2638.936 kb on - strandat 2638.987 kb on + strandat 2639.006 kb on + strandat 2639.006 kb on + strandat 2639.007 kb on - strandat 2639.009 kb on + strandat 2639.010 kb on - strandat 2639.019 kb on + strandat 2639.019 kb on + strandat 2639.019 kb on + strandat 2639.019 kb on + strandat 2639.064 kb on + strandat 2639.064 kb on + strandat 2639.064 kb on + strandat 2639.064 kb on + strandat 2639.065 kb on - strandat 2639.065 kb on - strandat 2639.083 kb on + strand, within ECD_02526at 2639.083 kb on + strand, within ECD_02526at 2639.083 kb on + strand, within ECD_02526at 2639.084 kb on - strand, within ECD_02526at 2639.106 kb on + strand, within ECD_02526at 2639.106 kb on + strand, within ECD_02526at 2639.106 kb on + strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.107 kb on - strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.183 kb on + strand, within ECD_02526at 2639.184 kb on - strand, within ECD_02526at 2639.184 kb on - strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.202 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.206 kb on + strand, within ECD_02526at 2639.207 kb on - strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.284 kb on + strand, within ECD_02526at 2639.285 kb on - strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.308 kb on + strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.309 kb on - strand, within ECD_02526at 2639.324 kb on + strand, within ECD_02526at 2639.352 kb on + strand, within ECD_02526

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,636,989 - +0.3
2,636,998 + +0.8
2,636,998 + +0.1
2,636,999 - +0.6
2,637,015 + +0.3
2,637,016 - -0.4
2,637,016 - -0.2
2,637,017 + -0.3
2,637,017 + -0.0
2,637,018 - +0.4
2,637,018 - -0.5
2,637,018 - -0.2
2,637,018 - +0.2
2,637,018 - -0.1
2,637,018 - -0.2
2,637,018 - -0.9
2,637,018 - -0.8
2,637,018 - +0.3
2,637,018 - -0.1
2,637,018 - -0.8
2,637,018 - +0.9
2,637,018 - +0.9
2,637,018 - -0.2
2,637,090 + +0.2
2,637,090 + +0.1
2,637,090 + -0.0
2,637,120 + ECD_02523 0.16 +0.0
2,637,253 + ECD_02523 0.61 -0.1
2,637,253 + ECD_02523 0.61 +0.5
2,637,253 + ECD_02523 0.61 +0.1
2,637,303 + ECD_02523 0.77 +0.1
2,637,303 + ECD_02523 0.77 +0.2
2,637,303 + ECD_02523 0.77 -0.5
2,637,303 + ECD_02523 0.77 -1.0
2,637,305 + ECD_02523 0.78 -0.3
2,637,359 + -0.5
2,637,359 + -1.1
2,637,359 + -0.6
2,637,562 - ECD_02524 0.35 +1.3
2,637,562 - ECD_02524 0.35 -0.1
2,637,592 + ECD_02524 0.40 +1.3
2,637,776 + ECD_02524 0.75 -0.1
2,637,804 + ECD_02524 0.81 -0.6
2,637,804 + ECD_02524 0.81 -0.1
2,637,804 + ECD_02524 0.81 +0.2
2,637,873 + -0.1
2,637,873 + +1.0
2,637,874 - +0.9
2,637,874 - +0.5
2,637,878 - +0.1
2,637,952 + +1.2
2,637,952 + -1.0
2,637,953 - -1.8
2,637,953 - -0.8
2,637,953 - +0.8
2,637,953 - -0.2
2,637,978 - +0.2
2,638,122 - ECD_02525 0.42 +0.2
2,638,125 - ECD_02525 0.43 +0.6
2,638,132 - ECD_02525 0.45 +1.1
2,638,717 + -0.5
2,638,718 - +0.6
2,638,738 - +0.2
2,638,738 - -1.7
2,638,738 - +0.4
2,638,746 - +0.7
2,638,846 - +0.1
2,638,870 - +0.4
2,638,935 + +1.2
2,638,935 + +0.3
2,638,935 + +0.9
2,638,935 + -0.2
2,638,935 + -0.2
2,638,936 - +0.4
2,638,987 + +0.1
2,639,006 + +0.5
2,639,006 + +0.2
2,639,007 - -0.4
2,639,009 + +0.6
2,639,010 - -0.4
2,639,019 + -0.9
2,639,019 + +0.2
2,639,019 + -0.2
2,639,019 + -1.0
2,639,064 + -0.2
2,639,064 + -1.1
2,639,064 + +0.8
2,639,064 + -0.3
2,639,065 - +0.2
2,639,065 - -0.2
2,639,083 + ECD_02526 0.13 +0.2
2,639,083 + ECD_02526 0.13 -0.7
2,639,083 + ECD_02526 0.13 -0.2
2,639,084 - ECD_02526 0.14 +0.4
2,639,106 + ECD_02526 0.18 -0.0
2,639,106 + ECD_02526 0.18 +0.1
2,639,106 + ECD_02526 0.18 +0.1
2,639,107 - ECD_02526 0.19 -0.2
2,639,107 - ECD_02526 0.19 -0.5
2,639,107 - ECD_02526 0.19 +0.8
2,639,107 - ECD_02526 0.19 -1.6
2,639,183 + ECD_02526 0.36 -0.1
2,639,183 + ECD_02526 0.36 -0.8
2,639,183 + ECD_02526 0.36 +0.3
2,639,183 + ECD_02526 0.36 +0.2
2,639,183 + ECD_02526 0.36 -0.1
2,639,184 - ECD_02526 0.36 -0.2
2,639,184 - ECD_02526 0.36 +1.7
2,639,202 + ECD_02526 0.40 -0.1
2,639,202 + ECD_02526 0.40 +0.0
2,639,202 + ECD_02526 0.40 +0.1
2,639,202 + ECD_02526 0.40 +1.2
2,639,202 + ECD_02526 0.40 -1.1
2,639,202 + ECD_02526 0.40 -0.0
2,639,202 + ECD_02526 0.40 -0.1
2,639,202 + ECD_02526 0.40 +1.5
2,639,206 + ECD_02526 0.41 +1.4
2,639,206 + ECD_02526 0.41 -0.3
2,639,206 + ECD_02526 0.41 +0.3
2,639,206 + ECD_02526 0.41 -1.5
2,639,206 + ECD_02526 0.41 +0.0
2,639,207 - ECD_02526 0.41 +2.0
2,639,284 + ECD_02526 0.58 +0.2
2,639,284 + ECD_02526 0.58 +0.5
2,639,284 + ECD_02526 0.58 +0.2
2,639,284 + ECD_02526 0.58 -0.4
2,639,284 + ECD_02526 0.58 +1.7
2,639,284 + ECD_02526 0.58 +0.3
2,639,284 + ECD_02526 0.58 -0.3
2,639,284 + ECD_02526 0.58 +0.1
2,639,284 + ECD_02526 0.58 +0.5
2,639,284 + ECD_02526 0.58 -0.5
2,639,285 - ECD_02526 0.58 +0.9
2,639,308 + ECD_02526 0.63 -0.1
2,639,308 + ECD_02526 0.63 +0.2
2,639,308 + ECD_02526 0.63 -0.3
2,639,308 + ECD_02526 0.63 -0.6
2,639,308 + ECD_02526 0.63 -0.6
2,639,308 + ECD_02526 0.63 -0.2
2,639,308 + ECD_02526 0.63 +1.6
2,639,308 + ECD_02526 0.63 +0.6
2,639,308 + ECD_02526 0.63 -1.2
2,639,308 + ECD_02526 0.63 -0.8
2,639,309 - ECD_02526 0.64 -0.1
2,639,309 - ECD_02526 0.64 +0.8
2,639,309 - ECD_02526 0.64 +0.4
2,639,309 - ECD_02526 0.64 -0.3
2,639,324 + ECD_02526 0.67 +0.6
2,639,352 + ECD_02526 0.73 +0.4

Or see this region's nucleotide sequence