Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02434 and ECD_02435 are separated by 96 nucleotides ECD_02435 and ECD_02436 are separated by 47 nucleotides ECD_02436 and ECD_02437 are separated by 11 nucleotides
ECD_02434: ECD_02434 - phenylpropionate dioxygenase, ferredoxin reductase subunit, at 2,537,852 to 2,539,054
_02434
ECD_02435: ECD_02435 - DoxX family inner membrane protein, at 2,539,151 to 2,539,573
_02435
ECD_02436: ECD_02436 - mutarotase superfamily protein, YphB family, at 2,539,621 to 2,540,493
_02436
ECD_02437: ECD_02437 - putative Zn-dependent NAD(P)-binding oxidoreductase, at 2,540,505 to 2,541,566
_02437
Position (kb)
2539
2540 Strain fitness (log2 ratio)
-1
0
1 at 2538.168 kb on + strand, within ECD_02434 at 2538.313 kb on + strand, within ECD_02434 at 2538.314 kb on - strand, within ECD_02434 at 2538.314 kb on - strand, within ECD_02434 at 2538.355 kb on + strand, within ECD_02434 at 2538.356 kb on - strand, within ECD_02434 at 2538.356 kb on - strand, within ECD_02434 at 2538.356 kb on - strand, within ECD_02434 at 2538.422 kb on + strand, within ECD_02434 at 2538.470 kb on - strand, within ECD_02434 at 2538.607 kb on + strand, within ECD_02434 at 2538.708 kb on + strand, within ECD_02434 at 2538.709 kb on - strand, within ECD_02434 at 2538.739 kb on + strand, within ECD_02434 at 2538.771 kb on + strand, within ECD_02434 at 2538.822 kb on - strand, within ECD_02434 at 2538.829 kb on + strand, within ECD_02434 at 2538.829 kb on + strand, within ECD_02434 at 2538.834 kb on + strand, within ECD_02434 at 2538.834 kb on + strand, within ECD_02434 at 2538.841 kb on + strand, within ECD_02434 at 2538.842 kb on - strand, within ECD_02434 at 2538.931 kb on + strand, within ECD_02434 at 2539.073 kb on - strand at 2539.112 kb on - strand at 2539.115 kb on - strand at 2539.130 kb on + strand at 2539.162 kb on - strand at 2539.200 kb on + strand, within ECD_02435 at 2539.283 kb on + strand, within ECD_02435 at 2539.284 kb on - strand, within ECD_02435 at 2539.285 kb on + strand, within ECD_02435 at 2539.339 kb on + strand, within ECD_02435 at 2539.340 kb on - strand, within ECD_02435 at 2539.362 kb on + strand, within ECD_02435 at 2539.362 kb on + strand, within ECD_02435 at 2539.537 kb on + strand at 2540.180 kb on + strand, within ECD_02436 at 2540.181 kb on - strand, within ECD_02436 at 2540.197 kb on - strand, within ECD_02436 at 2540.197 kb on - strand, within ECD_02436 at 2540.197 kb on - strand, within ECD_02436 at 2540.248 kb on + strand, within ECD_02436 at 2540.248 kb on + strand, within ECD_02436 at 2540.252 kb on + strand, within ECD_02436 at 2540.253 kb on - strand, within ECD_02436 at 2540.482 kb on - strand at 2540.483 kb on + strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.484 kb on - strand at 2540.520 kb on - strand at 2540.520 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,538,168 + ECD_02434 0.26 +0.4 2,538,313 + ECD_02434 0.38 +0.1 2,538,314 - ECD_02434 0.38 -0.1 2,538,314 - ECD_02434 0.38 +0.5 2,538,355 + ECD_02434 0.42 -0.7 2,538,356 - ECD_02434 0.42 -0.7 2,538,356 - ECD_02434 0.42 -0.9 2,538,356 - ECD_02434 0.42 -0.7 2,538,422 + ECD_02434 0.47 -0.1 2,538,470 - ECD_02434 0.51 -0.6 2,538,607 + ECD_02434 0.63 -0.3 2,538,708 + ECD_02434 0.71 -1.0 2,538,709 - ECD_02434 0.71 +0.7 2,538,739 + ECD_02434 0.74 +0.6 2,538,771 + ECD_02434 0.76 -0.4 2,538,822 - ECD_02434 0.81 -0.2 2,538,829 + ECD_02434 0.81 +0.8 2,538,829 + ECD_02434 0.81 +0.8 2,538,834 + ECD_02434 0.82 +0.5 2,538,834 + ECD_02434 0.82 -0.1 2,538,841 + ECD_02434 0.82 -0.4 2,538,842 - ECD_02434 0.82 +0.4 2,538,931 + ECD_02434 0.90 -0.7 2,539,073 - -0.6 2,539,112 - +1.0 2,539,115 - -0.3 2,539,130 + -0.4 2,539,162 - -0.5 2,539,200 + ECD_02435 0.12 +0.2 2,539,283 + ECD_02435 0.31 +0.7 2,539,284 - ECD_02435 0.31 +0.1 2,539,285 + ECD_02435 0.32 +1.3 2,539,339 + ECD_02435 0.44 +0.3 2,539,340 - ECD_02435 0.45 +0.9 2,539,362 + ECD_02435 0.50 +0.8 2,539,362 + ECD_02435 0.50 +0.1 2,539,537 + +0.6 2,540,180 + ECD_02436 0.64 +0.3 2,540,181 - ECD_02436 0.64 +0.4 2,540,197 - ECD_02436 0.66 -0.5 2,540,197 - ECD_02436 0.66 -0.1 2,540,197 - ECD_02436 0.66 -0.9 2,540,248 + ECD_02436 0.72 +1.3 2,540,248 + ECD_02436 0.72 -0.5 2,540,252 + ECD_02436 0.72 -0.2 2,540,253 - ECD_02436 0.72 +1.0 2,540,482 - +0.5 2,540,483 + +0.5 2,540,484 - -0.6 2,540,484 - +0.1 2,540,484 - +0.5 2,540,484 - +0.2 2,540,484 - +0.6 2,540,484 - +0.6 2,540,484 - +0.6 2,540,520 - +0.2 2,540,520 - +0.7
Or see this region's nucleotide sequence